RNA–Protein interactions for RNA: ENST00000391875.6

NVL-203, Transcript of nuclear VCP-like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NVL, Length 2,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NVL-203ENST00000391875 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
NVL-203ENST00000391875 CCDC180Q9P1Z9 1646 aa16.43■□□□□ 0.22
NVL-203ENST00000391875 SHROOM4Q9ULL8 1493 aa15.95■□□□□ 0.14
NVL-203ENST00000391875 SUPT5HO00267 1087 aaKnown RBP15.67■□□□□ 0.1
NVL-203ENST00000391875 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
NVL-203ENST00000391875 DCAF1Q9Y4B6 1507 aa15.61■□□□□ 0.09
NVL-203ENST00000391875 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
NVL-203ENST00000391875 MYO15BQ96JP2 1530 aa15.47■□□□□ 0.07
NVL-203ENST00000391875 NACADO15069 1562 aa15.18■□□□□ 0.02
NVL-203ENST00000391875 CHIC1Q5VXU3 224 aa15.13■□□□□ 0.01
NVL-203ENST00000391875 ABCC9O60706 1549 aa14.98□□□□□ -0.01
NVL-203ENST00000391875 RB1CC1Q8TDY2 1594 aa14.97□□□□□ -0.01
NVL-203ENST00000391875 PCGF6Q9BYE7 350 aa14.79□□□□□ -0.04
NVL-203ENST00000391875 LOC105371045A0A1W2PR82 267 aa14.76□□□□□ -0.05
NVL-203ENST00000391875 SCRIBQ14160 1630 aa14.74□□□□□ -0.05
NVL-203ENST00000391875 HRCP23327 699 aa14.73□□□□□ -0.05
NVL-203ENST00000391875 UNC13AQ9UPW8 1703 aa14.63□□□□□ -0.07
NVL-203ENST00000391875 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
NVL-203ENST00000391875 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
NVL-203ENST00000391875 FAM9AQ8IZU1 332 aaPredicted RBP14.51□□□□□ -0.09
NVL-203ENST00000391875 PPARGC1BQ86YN6 1023 aaKnown RBP14.51□□□□□ -0.09
NVL-203ENST00000391875 EHMT2Q96KQ7 1210 aa14.47□□□□□ -0.09
NVL-203ENST00000391875 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
NVL-203ENST00000391875 TRIM26Q12899 539 aaPredicted RBP14.42□□□□□ -0.1
NVL-203ENST00000391875 BICRAQ9NZM4 1560 aa14.42□□□□□ -0.1
NVL-203ENST00000391875 BAZ1AQ9NRL2 1556 aaPredicted RBP14.37□□□□□ -0.11
NVL-203ENST00000391875 MROH2BQ7Z745 1585 aa14.35□□□□□ -0.11
NVL-203ENST00000391875 WIZO95785 1651 aa14.27□□□□□ -0.13
NVL-203ENST00000391875 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
NVL-203ENST00000391875 PEG3Q9GZU2 1588 aa14.26□□□□□ -0.13
NVL-203ENST00000391875 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
NVL-203ENST00000391875 ZEB1P37275 1124 aaPredicted RBP14.1□□□□□ -0.15
NVL-203ENST00000391875 SMARCA2P51531 1590 aa14.08□□□□□ -0.15
NVL-203ENST00000391875 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
NVL-203ENST00000391875 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
NVL-203ENST00000391875 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
NVL-203ENST00000391875 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
NVL-203ENST00000391875 TTBK1Q5TCY1 1321 aaPredicted RBP14□□□□□ -0.17
NVL-203ENST00000391875 HMGXB3Q12766 1538 aa14□□□□□ -0.17
NVL-203ENST00000391875 EIF4G1Q04637 1599 aaKnown RBP13.99□□□□□ -0.17
NVL-203ENST00000391875 ATAD2BQ9ULI0 1458 aa13.94□□□□□ -0.18
NVL-203ENST00000391875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.92□□□□□ -0.18
NVL-203ENST00000391875 NCAPD3P42695 1498 aa13.91□□□□□ -0.18
NVL-203ENST00000391875 SOGA1O94964 1423 aa13.9□□□□□ -0.18
NVL-203ENST00000391875 CCER1Q8TC90 406 aaPredicted RBP13.89□□□□□ -0.19
NVL-203ENST00000391875 UBTFP17480 764 aaKnown RBP13.88□□□□□ -0.19
NVL-203ENST00000391875 CEP162Q5TB80 1403 aa13.85□□□□□ -0.19
NVL-203ENST00000391875 BAZ1BQ9UIG0 1483 aaKnown RBP13.85□□□□□ -0.19
NVL-203ENST00000391875 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
NVL-203ENST00000391875 RUSC2Q8N2Y8 1516 aa13.82□□□□□ -0.2
NVL-203ENST00000391875 TNIKQ9UKE5 1360 aa13.78□□□□□ -0.2
NVL-203ENST00000391875 PRDM2Q13029 1718 aa13.78□□□□□ -0.2
NVL-203ENST00000391875 WRNQ14191 1432 aaPredicted RBP eCLIP13.77□□□□□ -0.21
NVL-203ENST00000391875 EEA1Q15075 1411 aa13.75□□□□□ -0.21
NVL-203ENST00000391875 GOLGA3Q08378 1498 aa13.71□□□□□ -0.21
NVL-203ENST00000391875 RANGAP1P46060 587 aaPredicted RBP13.7□□□□□ -0.22
NVL-203ENST00000391875 CC2D2AQ9P2K1 1620 aa13.7□□□□□ -0.22
NVL-203ENST00000391875 SYNJ1O43426 1573 aa13.65□□□□□ -0.22
NVL-203ENST00000391875 CEP164Q9UPV0 1460 aa13.62□□□□□ -0.23
NVL-203ENST00000391875 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
NVL-203ENST00000391875 SCAF1Q9H7N4 1312 aaKnown RBP13.61□□□□□ -0.23
NVL-203ENST00000391875 CLIP1P30622 1438 aa13.6□□□□□ -0.23
NVL-203ENST00000391875 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
NVL-203ENST00000391875 APLP2Q06481 763 aa13.59□□□□□ -0.23
NVL-203ENST00000391875 CFTRP13569 1480 aa13.58□□□□□ -0.24
NVL-203ENST00000391875 BIVM-ERCC5R4GMW8 1640 aa13.55□□□□□ -0.24
NVL-203ENST00000391875 RAPGEF2Q9Y4G8 1499 aa13.55□□□□□ -0.24
NVL-203ENST00000391875 KIF21BO75037 1637 aa13.53□□□□□ -0.24
NVL-203ENST00000391875 VPS8Q8N3P4 1428 aa13.5□□□□□ -0.25
NVL-203ENST00000391875 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
NVL-203ENST00000391875 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
NVL-203ENST00000391875 NEUROD1Q13562 356 aa13.47□□□□□ -0.25
NVL-203ENST00000391875 ACIN1Q9UKV3 1341 aaKnown RBP13.47□□□□□ -0.25
NVL-203ENST00000391875 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.25
NVL-203ENST00000391875 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
NVL-203ENST00000391875 CENPBP07199 599 aaPredicted RBP13.43□□□□□ -0.26
NVL-203ENST00000391875 YTHDC1Q96MU7 727 aaKnown RBP13.38□□□□□ -0.27
NVL-203ENST00000391875 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
NVL-203ENST00000391875 CUX1P39880 1505 aa13.35□□□□□ -0.27
NVL-203ENST00000391875 PRXQ9BXM0 1461 aa13.35□□□□□ -0.27
NVL-203ENST00000391875 KIF27Q86VH2 1401 aa13.34□□□□□ -0.27
NVL-203ENST00000391875 KANK4Q5T7N3 995 aaPredicted RBP13.34□□□□□ -0.27
NVL-203ENST00000391875 ARAP1Q96P48 1450 aa13.32□□□□□ -0.28
NVL-203ENST00000391875 ERICH3Q5RHP9 1530 aa13.32□□□□□ -0.28
NVL-203ENST00000391875 DNMBPQ6XZF7 1577 aa13.31□□□□□ -0.28
NVL-203ENST00000391875 PELP1Q8IZL8 1130 aaKnown RBP13.3□□□□□ -0.28
NVL-203ENST00000391875 MIER1Q8N108 512 aa13.29□□□□□ -0.28
NVL-203ENST00000391875 ITGAEP38570 1179 aa13.28□□□□□ -0.28
NVL-203ENST00000391875 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
NVL-203ENST00000391875 PDS5BQ9NTI5 1447 aa13.27□□□□□ -0.29
NVL-203ENST00000391875 WDR97A6NE52 1622 aa13.25□□□□□ -0.29
NVL-203ENST00000391875 CUX2O14529 1486 aa13.23□□□□□ -0.29
NVL-203ENST00000391875 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
NVL-203ENST00000391875 ARHGAP35Q9NRY4 1499 aa13.21□□□□□ -0.3
NVL-203ENST00000391875 ATP1B4Q9UN42 357 aaPredicted RBP13.18□□□□□ -0.3
NVL-203ENST00000391875 IGF1RP08069 1367 aa13.18□□□□□ -0.3
NVL-203ENST00000391875 KIF21AQ7Z4S6 1674 aa13.17□□□□□ -0.3
NVL-203ENST00000391875 CCNB3Q8WWL7 1395 aa13.17□□□□□ -0.3
NVL-203ENST00000391875 TOPBP1Q92547 1522 aa13.17□□□□□ -0.3
NVL-203ENST00000391875 P3H3Q8IVL6 736 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms