Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 POMT2-207ENST00000554884 549 ntTSL 46.95□□□□□ -1.32e-6■■■□□ 14.7
PRPF8Q6P2Q9 FOXA1-204ENST00000554607 789 ntTSL 321.24■□□□□ 0.991e-8■■■□□ 14.7
PRPF8Q6P2Q9 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.396e-9■■■□□ 14.7
PRPF8Q6P2Q9 SRSF4-206ENST00000605204 1399 ntTSL 1 (best)16.16■□□□□ 0.183e-8■■■□□ 14.7
PRPF8Q6P2Q9 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.5■□□□□ 0.074e-6■■■□□ 14.7
PRPF8Q6P2Q9 IFRD1-213ENST00000476927 486 ntTSL 314.85□□□□□ -0.034e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.054e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.63□□□□□ -0.074e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.02□□□□□ -0.174e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.02□□□□□ -0.174e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.72□□□□□ -0.374e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.34□□□□□ -0.434e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.484e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-205ENST00000465893 1456 ntTSL 1 (best)11.32□□□□□ -0.64e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-214ENST00000486443 764 ntTSL 3 BASIC10.36□□□□□ -0.754e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-210ENST00000479950 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.964e-6■■■□□ 14.7
PRPF8Q6P2Q9 NME2-209ENST00000573262 789 ntTSL 1 (best)8.31□□□□□ -1.084e-6■■■□□ 14.7
PRPF8Q6P2Q9 IFRD1-207ENST00000440625 891 ntTSL 46.53□□□□□ -1.364e-6■■■□□ 14.7
PRPF8Q6P2Q9 MTERF1-204ENST00000425936 720 ntTSL 1 (best)6.48□□□□□ -1.374e-6■■■□□ 14.7
PRPF8Q6P2Q9 MTERF1-207ENST00000456229 581 ntTSL 56.47□□□□□ -1.374e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.64e-6■■■□□ 14.7
PRPF8Q6P2Q9 MTERF1-205ENST00000442961 554 ntTSL 44.92□□□□□ -1.624e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-215ENST00000488238 814 ntTSL 54.78□□□□□ -1.644e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.75□□□□□ -1.654e-6■■■□□ 14.7
PRPF8Q6P2Q9 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.714e-6■■■□□ 14.7
PRPF8Q6P2Q9 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.774e-6■■■□□ 14.7
PRPF8Q6P2Q9 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.814e-6■■■□□ 14.7
PRPF8Q6P2Q9 MTERF1-206ENST00000454222 380 ntTSL 50.58□□□□□ -2.324e-6■■■□□ 14.7
PRPF8Q6P2Q9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.47□□□□□ -2.334e-6■■■□□ 14.7
PRPF8Q6P2Q9 CBX6-203ENST00000469420 2213 ntTSL 212.95□□□□□ -0.342e-6■■■□□ 14.7
PRPF8Q6P2Q9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.462e-6■■■□□ 14.7
PRPF8Q6P2Q9 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.532e-6■■■□□ 14.7
PRPF8Q6P2Q9 MRPS25-207ENST00000496484 823 ntTSL 28.7□□□□□ -1.021e-6■■■□□ 14.6
PRPF8Q6P2Q9 MRPS25-206ENST00000474866 540 ntTSL 38.42□□□□□ -1.061e-6■■■□□ 14.6
PRPF8Q6P2Q9 CAMTA2-211ENST00000574606 534 ntTSL 510.33□□□□□ -0.766e-7■■■□□ 14.6
PRPF8Q6P2Q9 CCDC189-203ENST00000537986 496 ntTSL 29.81□□□□□ -0.842e-6■■■□□ 14.6
PRPF8Q6P2Q9 CAMTA2-209ENST00000573004 962 ntTSL 28.14□□□□□ -1.116e-7■■■□□ 14.6
PRPF8Q6P2Q9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.85□□□□□ -0.353e-7■■■□□ 14.6
PRPF8Q6P2Q9 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.63e-7■■■□□ 14.6
PRPF8Q6P2Q9 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.2□□□□□ -0.623e-7■■■□□ 14.6
PRPF8Q6P2Q9 OS9-203ENST00000389142 2457 ntTSL 5 BASIC10.72□□□□□ -0.693e-7■■■□□ 14.6
PRPF8Q6P2Q9 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.64□□□□□ -0.713e-7■■■□□ 14.6
PRPF8Q6P2Q9 OS9-218ENST00000551035 2246 ntTSL 2 BASIC9.9□□□□□ -0.833e-7■■■□□ 14.6
PRPF8Q6P2Q9 OS9-206ENST00000435406 2346 ntTSL 2 BASIC9.8□□□□□ -0.843e-7■■■□□ 14.6
PRPF8Q6P2Q9 OS9-202ENST00000315970 2691 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.873e-7■■■□□ 14.6
PRPF8Q6P2Q9 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.953e-7■■■□□ 14.6
PRPF8Q6P2Q9 PNKP-205ENST00000595081 513 ntTSL 219.12■□□□□ 0.651e-7■■■□□ 14.6
PRPF8Q6P2Q9 PNKP-210ENST00000597965 351 ntTSL 514.85□□□□□ -0.031e-7■■■□□ 14.6
PRPF8Q6P2Q9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.098e-13■■■□□ 14.6
PRPF8Q6P2Q9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.278e-13■■■□□ 14.6
PRPF8Q6P2Q9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.358e-13■■■□□ 14.6
PRPF8Q6P2Q9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.458e-13■■■□□ 14.6
PRPF8Q6P2Q9 SEMA3B-214ENST00000619119 3158 ntTSL 512.02□□□□□ -0.498e-13■■■□□ 14.6
PRPF8Q6P2Q9 NDUFV1-206ENST00000526138 557 ntTSL 48.52□□□□□ -1.051e-7■■■□□ 14.6
PRPF8Q6P2Q9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.464e-7■■■□□ 14.6
PRPF8Q6P2Q9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.172e-6■■■□□ 14.6
PRPF8Q6P2Q9 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.332e-6■■■□□ 14.6
PRPF8Q6P2Q9 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.582e-6■■■□□ 14.6
PRPF8Q6P2Q9 SHANK2-220ENST00000608988 1879 ntTSL 515.9■□□□□ 0.148e-7■■■□□ 14.6
PRPF8Q6P2Q9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.21e-7■■■□□ 14.6
PRPF8Q6P2Q9 FNDC3B-211ENST00000490832 772 ntTSL 46.7□□□□□ -1.341e-9■■■□□ 14.6
PRPF8Q6P2Q9 EML3-206ENST00000439994 671 ntTSL 520.15■□□□□ 0.822e-7■■■□□ 14.6
PRPF8Q6P2Q9 MCM3AP-206ENST00000481113 570 ntTSL 210.52□□□□□ -0.721e-9■■■□□ 14.6
PRPF8Q6P2Q9 ANPEP-201ENST00000300060 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.942e-7■■■□□ 14.6
PRPF8Q6P2Q9 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.274e-7■■■□□ 14.6
PRPF8Q6P2Q9 ZDHHC8-205ENST00000468112 524 ntTSL 312.25□□□□□ -0.454e-7■■■□□ 14.6
PRPF8Q6P2Q9 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.61□□□□□ -0.554e-7■■■□□ 14.6
PRPF8Q6P2Q9 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.77□□□□□ -0.694e-7■■■□□ 14.6
PRPF8Q6P2Q9 SLC46A1-203ENST00000582590 1435 ntTSL 215.9■□□□□ 0.143e-9■■■□□ 14.6
PRPF8Q6P2Q9 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.69□□□□□ -0.73e-9■■■□□ 14.6
PRPF8Q6P2Q9 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.793e-9■■■□□ 14.6
PRPF8Q6P2Q9 SLC46A1-201ENST00000578217 596 ntTSL 47.64□□□□□ -1.193e-9■■■□□ 14.6
PRPF8Q6P2Q9 SLC46A1-204ENST00000582735 574 ntTSL 46.6□□□□□ -1.353e-9■■■□□ 14.6
PRPF8Q6P2Q9 C1QBP-203ENST00000573204 911 ntTSL 27.69□□□□□ -1.182e-7■■■□□ 14.6
PRPF8Q6P2Q9 DMKN-262ENST00000593342 271 ntAPPRIS ALT2 TSL 313.21□□□□□ -0.34e-7■■■□□ 14.6
PRPF8Q6P2Q9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.35e-8■■■□□ 14.6
PRPF8Q6P2Q9 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.334e-7■■■□□ 14.6
PRPF8Q6P2Q9 DMKN-266ENST00000601650 324 ntAPPRIS ALT2 TSL 38.01□□□□□ -1.134e-7■■■□□ 14.6
PRPF8Q6P2Q9 CDK11B-202ENST00000341028 881 ntTSL 218.96■□□□□ 0.634e-7■■■□□ 14.6
PRPF8Q6P2Q9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.087e-8■■■□□ 14.6
PRPF8Q6P2Q9 REC8-208ENST00000560823 424 ntTSL 310.03□□□□□ -0.83e-7■■■□□ 14.6
PRPF8Q6P2Q9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.41□□□□□ -0.18e-29■■■□□ 14.6
PRPF8Q6P2Q9 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.73□□□□□ -0.378e-29■■■□□ 14.6
PRPF8Q6P2Q9 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.44□□□□□ -0.428e-29■■■□□ 14.6
PRPF8Q6P2Q9 PEX13-205ENST00000472678 601 ntTSL 211.81□□□□□ -0.528e-29■■■□□ 14.6
PRPF8Q6P2Q9 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.488e-29■■■□□ 14.6
PRPF8Q6P2Q9 PROC-204ENST00000419985 500 ntTSL 418.74■□□□□ 0.592e-18■■■□□ 14.6
PRPF8Q6P2Q9 SERPINF1-205ENST00000571360 478 ntTSL 313.33□□□□□ -0.282e-17■■■□□ 14.6
PRPF8Q6P2Q9 SERPINF1-206ENST00000571870 739 ntTSL 213.01□□□□□ -0.332e-17■■■□□ 14.6
PRPF8Q6P2Q9 SERPINF1-210ENST00000573770 789 ntTSL 310.42□□□□□ -0.742e-17■■■□□ 14.6
PRPF8Q6P2Q9 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC5.78□□□□□ -1.483e-12■■■□□ 14.6
PRPF8Q6P2Q9 EIF4A1-206ENST00000577929 696 ntTSL 216.39■□□□□ 0.213e-38■■■□□ 14.6
PRPF8Q6P2Q9 EIF4A1-219ENST00000581770 447 ntTSL 212.14□□□□□ -0.473e-38■■■□□ 14.6
PRPF8Q6P2Q9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.02□□□□□ -0.328e-7■■■□□ 14.6
PRPF8Q6P2Q9 CCNL2-211ENST00000480479 2792 ntTSL 29.9□□□□□ -0.828e-7■■■□□ 14.6
PRPF8Q6P2Q9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.511e-14■■■□□ 14.6
PRPF8Q6P2Q9 SLC17A9-207ENST00000488738 3992 ntTSL 210.55□□□□□ -0.721e-14■■■□□ 14.6
PRPF8Q6P2Q9 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.741e-14■■■□□ 14.6
PRPF8Q6P2Q9 FDPS-213ENST00000489003 976 ntTSL 212.66□□□□□ -0.382e-10■■■□□ 14.6
PRPF8Q6P2Q9 FDPS-219ENST00000495308 808 ntTSL 211.46□□□□□ -0.582e-10■■■□□ 14.6
Retrieved 100 of 73,762 protein–RNA pairs in 1252.2 ms