RNA–Protein interactions for RNA: ENST00000472678.1

PEX13-205, Transcript of peroxisomal biogenesis factor 13, humanhuman

TSL 2

Gene PEX13, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX13-205ENST00000472678 NISCHQ9Y2I1 1504 aa33.49■■■□□ 2.95
PEX13-205ENST00000472678 ABCC9O60706 1549 aa30.47■■■□□ 2.47
PEX13-205ENST00000472678 CCDC180Q9P1Z9 1646 aa30.1■■■□□ 2.41
PEX13-205ENST00000472678 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
PEX13-205ENST00000472678 RB1CC1Q8TDY2 1594 aa28.79■■■□□ 2.2
PEX13-205ENST00000472678 DCAF8L2P0C7V8 631 aa28.58■■■□□ 2.17
PEX13-205ENST00000472678 NACADO15069 1562 aa28.5■■■□□ 2.15
PEX13-205ENST00000472678 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
PEX13-205ENST00000472678 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
PEX13-205ENST00000472678 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
PEX13-205ENST00000472678 MYO15BQ96JP2 1530 aa27.93■■■□□ 2.06
PEX13-205ENST00000472678 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.02
PEX13-205ENST00000472678 SCRIBQ14160 1630 aa27.56■■■□□ 2
PEX13-205ENST00000472678 DCAF1Q9Y4B6 1507 aa27.54■■■□□ 2
PEX13-205ENST00000472678 CC2D2AQ9P2K1 1620 aa27.46■■□□□ 1.99
PEX13-205ENST00000472678 CECR2Q9BXF3 1484 aa27.41■■□□□ 1.98
PEX13-205ENST00000472678 SHROOM4Q9ULL8 1493 aa27.41■■□□□ 1.98
PEX13-205ENST00000472678 EIF4G1Q04637 1599 aaKnown RBP27.32■■□□□ 1.96
PEX13-205ENST00000472678 DNAJC5Q9H3Z4 198 aa26.5■■□□□ 1.83
PEX13-205ENST00000472678 NCAPD3P42695 1498 aa26.31■■□□□ 1.8
PEX13-205ENST00000472678 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
PEX13-205ENST00000472678 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
PEX13-205ENST00000472678 CUX2O14529 1486 aa26.2■■□□□ 1.78
PEX13-205ENST00000472678 SMARCA4P51532 1647 aa26.2■■□□□ 1.78
PEX13-205ENST00000472678 SMARCA2P51531 1590 aa26.14■■□□□ 1.78
PEX13-205ENST00000472678 NESP48681 1621 aa26.12■■□□□ 1.77
PEX13-205ENST00000472678 HMGXB3Q12766 1538 aa26.09■■□□□ 1.77
PEX13-205ENST00000472678 BAZ1BQ9UIG0 1483 aaKnown RBP26.01■■□□□ 1.75
PEX13-205ENST00000472678 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
PEX13-205ENST00000472678 MROH2BQ7Z745 1585 aa25.86■■□□□ 1.73
PEX13-205ENST00000472678 PEG3Q9GZU2 1588 aa25.84■■□□□ 1.73
PEX13-205ENST00000472678 THOC2Q8NI27 1593 aaKnown RBP25.81■■□□□ 1.72
PEX13-205ENST00000472678 LAMC3Q9Y6N6 1575 aa25.77■■□□□ 1.72
PEX13-205ENST00000472678 KIF21AQ7Z4S6 1674 aa25.76■■□□□ 1.71
PEX13-205ENST00000472678 PDS5BQ9NTI5 1447 aa25.64■■□□□ 1.7
PEX13-205ENST00000472678 WIZO95785 1651 aa25.58■■□□□ 1.69
PEX13-205ENST00000472678 CADPSQ9ULU8 1353 aa25.55■■□□□ 1.68
PEX13-205ENST00000472678 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
PEX13-205ENST00000472678 TRIM41Q8WV44 630 aa25.41■■□□□ 1.66
PEX13-205ENST00000472678 WDR62O43379 1518 aa25.38■■□□□ 1.65
PEX13-205ENST00000472678 CEP164Q9UPV0 1460 aa25.33■■□□□ 1.65
PEX13-205ENST00000472678 FANCD2Q9BXW9 1451 aa25.29■■□□□ 1.64
PEX13-205ENST00000472678 RSF1Q96T23 1441 aaPredicted RBP25.21■■□□□ 1.63
PEX13-205ENST00000472678 CFTRP13569 1480 aa25.19■■□□□ 1.62
PEX13-205ENST00000472678 TOP2AP11388 1531 aaKnown RBP25.16■■□□□ 1.62
PEX13-205ENST00000472678 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
PEX13-205ENST00000472678 OSCARQ8IYS5 282 aa25.05■■□□□ 1.6
PEX13-205ENST00000472678 PRDM2Q13029 1718 aa24.96■■□□□ 1.59
PEX13-205ENST00000472678 CCDC88BA6NC98 1476 aa24.91■■□□□ 1.58
PEX13-205ENST00000472678 ZNF608Q9ULD9 1512 aaPredicted RBP24.87■■□□□ 1.57
PEX13-205ENST00000472678 IFT140Q96RY7 1462 aa24.8■■□□□ 1.56
PEX13-205ENST00000472678 TOPBP1Q92547 1522 aa24.79■■□□□ 1.56
PEX13-205ENST00000472678 RIMBP3CA6NJZ7 1639 aa24.78■■□□□ 1.56
PEX13-205ENST00000472678 RIMBP3BA6NNM3 1639 aa24.78■■□□□ 1.56
PEX13-205ENST00000472678 RIMBP3Q9UFD9 1639 aa24.78■■□□□ 1.56
PEX13-205ENST00000472678 EIF4G3O43432 1585 aaKnown RBP24.69■■□□□ 1.54
PEX13-205ENST00000472678 DNMBPQ6XZF7 1577 aa24.66■■□□□ 1.54
PEX13-205ENST00000472678 ARHGEF11O15085 1522 aa24.65■■□□□ 1.54
PEX13-205ENST00000472678 AQRO60306 1485 aaKnown RBP eCLIP24.63■■□□□ 1.53
PEX13-205ENST00000472678 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
PEX13-205ENST00000472678 CHD1O14646 1710 aa24.6■■□□□ 1.53
PEX13-205ENST00000472678 FBLN2P98095 1184 aa24.58■■□□□ 1.53
PEX13-205ENST00000472678 CYB5RLQ6IPT4 315 aa24.57■■□□□ 1.52
PEX13-205ENST00000472678 TARBP1Q13395 1621 aaKnown RBP24.57■■□□□ 1.52
PEX13-205ENST00000472678 POLA1P09884 1462 aaPredicted RBP24.52■■□□□ 1.52
PEX13-205ENST00000472678 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
PEX13-205ENST00000472678 TDRD9Q8NDG6 1382 aaKnown RBP24.45■■□□□ 1.5
PEX13-205ENST00000472678 SOGA1O94964 1423 aa24.42■■□□□ 1.5
PEX13-205ENST00000472678 ARAP1Q96P48 1450 aa24.39■■□□□ 1.5
PEX13-205ENST00000472678 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
PEX13-205ENST00000472678 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
PEX13-205ENST00000472678 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
PEX13-205ENST00000472678 CUX1P39880 1505 aa24.3■■□□□ 1.48
PEX13-205ENST00000472678 CHMP7Q8WUX9 453 aaPredicted RBP24.29■■□□□ 1.48
PEX13-205ENST00000472678 CLASP1Q7Z460 1538 aa24.21■■□□□ 1.47
PEX13-205ENST00000472678 SYNJ1O43426 1573 aa24.2■■□□□ 1.46
PEX13-205ENST00000472678 GRIN2BQ13224 1484 aa24.19■■□□□ 1.46
PEX13-205ENST00000472678 WDR97A6NE52 1622 aa24.19■■□□□ 1.46
PEX13-205ENST00000472678 MAGI1Q96QZ7 1491 aaPredicted RBP24.19■■□□□ 1.46
PEX13-205ENST00000472678 PBRM1Q86U86 1689 aa24.15■■□□□ 1.46
PEX13-205ENST00000472678 SYNJ2O15056 1496 aa24.13■■□□□ 1.45
PEX13-205ENST00000472678 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
PEX13-205ENST00000472678 GAPVD1Q14C86 1478 aa24.11■■□□□ 1.45
PEX13-205ENST00000472678 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
PEX13-205ENST00000472678 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
PEX13-205ENST00000472678 ERCC6L2Q5T890 1561 aa23.93■■□□□ 1.42
PEX13-205ENST00000472678 GRIN2AQ12879 1464 aa23.89■■□□□ 1.42
PEX13-205ENST00000472678 WRNQ14191 1432 aaPredicted RBP eCLIP23.88■■□□□ 1.41
PEX13-205ENST00000472678 ADAMTS12P58397 1594 aa23.86■■□□□ 1.41
PEX13-205ENST00000472678 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
PEX13-205ENST00000472678 BIVM-ERCC5R4GMW8 1640 aa23.82■■□□□ 1.4
PEX13-205ENST00000472678 TOP2BQ02880 1626 aa23.81■■□□□ 1.4
PEX13-205ENST00000472678 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
PEX13-205ENST00000472678 NUP160Q12769 1436 aa23.79■■□□□ 1.4
PEX13-205ENST00000472678 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
PEX13-205ENST00000472678 SHROOM2Q13796 1616 aa23.71■■□□□ 1.39
PEX13-205ENST00000472678 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
PEX13-205ENST00000472678 PRG4Q92954 1404 aaPredicted RBP23.65■■□□□ 1.38
PEX13-205ENST00000472678 JPH4Q96JJ6 628 aa23.62■■□□□ 1.37
PEX13-205ENST00000472678 KIF13AQ9H1H9 1805 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms