RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
SLC46A1-201ENST00000578217 CHIC1Q5VXU3 224 aa22.33■■□□□ 1.17
SLC46A1-201ENST00000578217 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
SLC46A1-201ENST00000578217 SENP3Q9H4L4 574 aaPredicted RBP19.81■□□□□ 0.76
SLC46A1-201ENST00000578217 ABCC9O60706 1549 aa19.74■□□□□ 0.75
SLC46A1-201ENST00000578217 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
SLC46A1-201ENST00000578217 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
SLC46A1-201ENST00000578217 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
SLC46A1-201ENST00000578217 FOXD1Q16676 465 aa18.6■□□□□ 0.57
SLC46A1-201ENST00000578217 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
SLC46A1-201ENST00000578217 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
SLC46A1-201ENST00000578217 NACADO15069 1562 aa18.13■□□□□ 0.49
SLC46A1-201ENST00000578217 UNC13AQ9UPW8 1703 aa18.11■□□□□ 0.49
SLC46A1-201ENST00000578217 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
SLC46A1-201ENST00000578217 BICRAQ9NZM4 1560 aa18.04■□□□□ 0.48
SLC46A1-201ENST00000578217 DCAF8L2P0C7V8 631 aa18■□□□□ 0.47
SLC46A1-201ENST00000578217 POTEDQ86YR6 584 aa17.93■□□□□ 0.46
SLC46A1-201ENST00000578217 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
SLC46A1-201ENST00000578217 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
SLC46A1-201ENST00000578217 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
SLC46A1-201ENST00000578217 MYO15BQ96JP2 1530 aa17.67■□□□□ 0.42
SLC46A1-201ENST00000578217 EIF4G1Q04637 1599 aaKnown RBP17.57■□□□□ 0.4
SLC46A1-201ENST00000578217 SHROOM4Q9ULL8 1493 aa17.52■□□□□ 0.4
SLC46A1-201ENST00000578217 MSH5O43196 834 aa17.49■□□□□ 0.39
SLC46A1-201ENST00000578217 SCRIBQ14160 1630 aa17.43■□□□□ 0.38
SLC46A1-201ENST00000578217 PPP6R1Q9UPN7 881 aa17.39■□□□□ 0.37
SLC46A1-201ENST00000578217 ADRA2BP18089 450 aa17.33■□□□□ 0.36
SLC46A1-201ENST00000578217 ZCCHC6Q5VYS8 1495 aaKnown RBP17.31■□□□□ 0.36
SLC46A1-201ENST00000578217 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
SLC46A1-201ENST00000578217 PIAS4Q8N2W9 510 aaPredicted RBP17.2■□□□□ 0.34
SLC46A1-201ENST00000578217 CUX2O14529 1486 aa17.12■□□□□ 0.33
SLC46A1-201ENST00000578217 ERCC6Q03468 1493 aa16.98■□□□□ 0.31
SLC46A1-201ENST00000578217 TRIM41Q8WV44 630 aa16.85■□□□□ 0.29
SLC46A1-201ENST00000578217 NESP48681 1621 aa16.85■□□□□ 0.29
SLC46A1-201ENST00000578217 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
SLC46A1-201ENST00000578217 THOC2Q8NI27 1593 aaKnown RBP16.72■□□□□ 0.27
SLC46A1-201ENST00000578217 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
SLC46A1-201ENST00000578217 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
SLC46A1-201ENST00000578217 SMARCA2P51531 1590 aa16.59■□□□□ 0.25
SLC46A1-201ENST00000578217 KIF21AQ7Z4S6 1674 aa16.53■□□□□ 0.24
SLC46A1-201ENST00000578217 SMARCA4P51532 1647 aa16.52■□□□□ 0.24
SLC46A1-201ENST00000578217 BAZ1BQ9UIG0 1483 aaKnown RBP16.47■□□□□ 0.23
SLC46A1-201ENST00000578217 LAMC3Q9Y6N6 1575 aa16.46■□□□□ 0.23
SLC46A1-201ENST00000578217 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
SLC46A1-201ENST00000578217 BAZ1AQ9NRL2 1556 aaPredicted RBP16.34■□□□□ 0.21
SLC46A1-201ENST00000578217 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
SLC46A1-201ENST00000578217 MRC2Q9UBG0 1479 aa16.32■□□□□ 0.2
SLC46A1-201ENST00000578217 WDR62O43379 1518 aa16.31■□□□□ 0.2
SLC46A1-201ENST00000578217 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.2
SLC46A1-201ENST00000578217 CADPSQ9ULU8 1353 aa16.26■□□□□ 0.19
SLC46A1-201ENST00000578217 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
SLC46A1-201ENST00000578217 RIMBP3CA6NJZ7 1639 aa16.19■□□□□ 0.18
SLC46A1-201ENST00000578217 RIMBP3BA6NNM3 1639 aa16.19■□□□□ 0.18
SLC46A1-201ENST00000578217 RIMBP3Q9UFD9 1639 aa16.19■□□□□ 0.18
SLC46A1-201ENST00000578217 CEP164Q9UPV0 1460 aa16.12■□□□□ 0.17
SLC46A1-201ENST00000578217 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
SLC46A1-201ENST00000578217 ARHGEF11O15085 1522 aa16.07■□□□□ 0.16
SLC46A1-201ENST00000578217 URB2Q14146 1524 aaKnown RBP16.06■□□□□ 0.16
SLC46A1-201ENST00000578217 WIZO95785 1651 aa16.03■□□□□ 0.16
SLC46A1-201ENST00000578217 CYB5RLQ6IPT4 315 aa15.99■□□□□ 0.15
SLC46A1-201ENST00000578217 ZNF608Q9ULD9 1512 aaPredicted RBP15.99■□□□□ 0.15
SLC46A1-201ENST00000578217 CFTRP13569 1480 aa15.97■□□□□ 0.15
SLC46A1-201ENST00000578217 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
SLC46A1-201ENST00000578217 PPP4R3CPQ6ZMV5 832 aa15.93■□□□□ 0.14
SLC46A1-201ENST00000578217 ARAP1Q96P48 1450 aa15.91■□□□□ 0.14
SLC46A1-201ENST00000578217 IFT140Q96RY7 1462 aa15.82■□□□□ 0.12
SLC46A1-201ENST00000578217 CHD1O14646 1710 aa15.8■□□□□ 0.12
SLC46A1-201ENST00000578217 EIF4G3O43432 1585 aaKnown RBP15.79■□□□□ 0.12
SLC46A1-201ENST00000578217 SCAF1Q9H7N4 1312 aaKnown RBP15.77■□□□□ 0.12
SLC46A1-201ENST00000578217 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
SLC46A1-201ENST00000578217 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
SLC46A1-201ENST00000578217 AQRO60306 1485 aaKnown RBP eCLIP15.73■□□□□ 0.11
SLC46A1-201ENST00000578217 TOP2AP11388 1531 aaKnown RBP15.72■□□□□ 0.11
SLC46A1-201ENST00000578217 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
SLC46A1-201ENST00000578217 PRDM2Q13029 1718 aa15.7■□□□□ 0.1
SLC46A1-201ENST00000578217 FBLN2P98095 1184 aa15.68■□□□□ 0.1
SLC46A1-201ENST00000578217 DMRT2Q9Y5R5 561 aa15.67■□□□□ 0.1
SLC46A1-201ENST00000578217 TARBP1Q13395 1621 aaKnown RBP15.66■□□□□ 0.1
SLC46A1-201ENST00000578217 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
SLC46A1-201ENST00000578217 CLASP1Q7Z460 1538 aa15.59■□□□□ 0.09
SLC46A1-201ENST00000578217 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
SLC46A1-201ENST00000578217 RAD54L2Q9Y4B4 1467 aa15.56■□□□□ 0.08
SLC46A1-201ENST00000578217 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
SLC46A1-201ENST00000578217 TDRD9Q8NDG6 1382 aaKnown RBP15.55■□□□□ 0.08
SLC46A1-201ENST00000578217 ABCC8Q09428 1581 aa15.53■□□□□ 0.08
SLC46A1-201ENST00000578217 SNAPC4Q5SXM2 1469 aa15.52■□□□□ 0.08
SLC46A1-201ENST00000578217 KCNA4P22459 653 aa15.52■□□□□ 0.08
SLC46A1-201ENST00000578217 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
SLC46A1-201ENST00000578217 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
SLC46A1-201ENST00000578217 SYNJ1O43426 1573 aa15.44■□□□□ 0.06
SLC46A1-201ENST00000578217 SOGA1O94964 1423 aa15.43■□□□□ 0.06
SLC46A1-201ENST00000578217 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
SLC46A1-201ENST00000578217 CHMP7Q8WUX9 453 aaPredicted RBP15.43■□□□□ 0.06
SLC46A1-201ENST00000578217 ERCC6L2Q5T890 1561 aa15.41■□□□□ 0.06
SLC46A1-201ENST00000578217 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
SLC46A1-201ENST00000578217 ILDR1Q86SU0 546 aaPredicted RBP15.37■□□□□ 0.05
SLC46A1-201ENST00000578217 FGD5Q6ZNL6 1462 aa15.37■□□□□ 0.05
SLC46A1-201ENST00000578217 SYNJ2O15056 1496 aa15.36■□□□□ 0.05
SLC46A1-201ENST00000578217 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
SLC46A1-201ENST00000578217 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms