RNA–Protein interactions for RNA: ENST00000440625.5

IFRD1-207, Transcript of interferon related developmental regulator 1, humanhuman

TSL 4

Gene IFRD1, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-207ENST00000440625 NISCHQ9Y2I1 1504 aa18.79■□□□□ 0.6
IFRD1-207ENST00000440625 AEBP2Q6ZN18 517 aaPredicted RBP17.23■□□□□ 0.35
IFRD1-207ENST00000440625 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.2
IFRD1-207ENST00000440625 CHIC1Q5VXU3 224 aa16.18■□□□□ 0.18
IFRD1-207ENST00000440625 ZCCHC6Q5VYS8 1495 aaKnown RBP15.81■□□□□ 0.12
IFRD1-207ENST00000440625 DCAF1Q9Y4B6 1507 aa15.54■□□□□ 0.08
IFRD1-207ENST00000440625 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
IFRD1-207ENST00000440625 SHROOM4Q9ULL8 1493 aa15.37■□□□□ 0.05
IFRD1-207ENST00000440625 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
IFRD1-207ENST00000440625 ABCC9O60706 1549 aa15.31■□□□□ 0.04
IFRD1-207ENST00000440625 NACADO15069 1562 aa15.15■□□□□ 0.02
IFRD1-207ENST00000440625 SCRIBQ14160 1630 aa14.98□□□□□ -0.01
IFRD1-207ENST00000440625 RB1CC1Q8TDY2 1594 aa14.96□□□□□ -0.01
IFRD1-207ENST00000440625 SENP3Q9H4L4 574 aaPredicted RBP14.87□□□□□ -0.03
IFRD1-207ENST00000440625 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
IFRD1-207ENST00000440625 UNC13AQ9UPW8 1703 aa14.68□□□□□ -0.06
IFRD1-207ENST00000440625 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
IFRD1-207ENST00000440625 CECR2Q9BXF3 1484 aa14.63□□□□□ -0.07
IFRD1-207ENST00000440625 BICRAQ9NZM4 1560 aa14.6□□□□□ -0.07
IFRD1-207ENST00000440625 PHF23Q9BUL5 403 aaPredicted RBP14.56□□□□□ -0.08
IFRD1-207ENST00000440625 MROH2BQ7Z745 1585 aa14.54□□□□□ -0.08
IFRD1-207ENST00000440625 PABPN1Q86U42 306 aaKnown RBP eCLIP14.48□□□□□ -0.09
IFRD1-207ENST00000440625 BAZ1AQ9NRL2 1556 aaPredicted RBP14.46□□□□□ -0.09
IFRD1-207ENST00000440625 SMARCA4P51532 1647 aa14.39□□□□□ -0.11
IFRD1-207ENST00000440625 WIZO95785 1651 aa14.39□□□□□ -0.11
IFRD1-207ENST00000440625 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
IFRD1-207ENST00000440625 TOP2AP11388 1531 aaKnown RBP14.24□□□□□ -0.13
IFRD1-207ENST00000440625 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
IFRD1-207ENST00000440625 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
IFRD1-207ENST00000440625 CCDC88BA6NC98 1476 aa14.13□□□□□ -0.15
IFRD1-207ENST00000440625 EIF4G1Q04637 1599 aaKnown RBP14.1□□□□□ -0.15
IFRD1-207ENST00000440625 NCAPD3P42695 1498 aa14.03□□□□□ -0.16
IFRD1-207ENST00000440625 BAZ1BQ9UIG0 1483 aaKnown RBP14.03□□□□□ -0.16
IFRD1-207ENST00000440625 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
IFRD1-207ENST00000440625 TRIM41Q8WV44 630 aa13.93□□□□□ -0.18
IFRD1-207ENST00000440625 FOXD1Q16676 465 aa13.87□□□□□ -0.19
IFRD1-207ENST00000440625 CC2D2AQ9P2K1 1620 aa13.85□□□□□ -0.19
IFRD1-207ENST00000440625 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
IFRD1-207ENST00000440625 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
IFRD1-207ENST00000440625 LOC105371045A0A1W2PR82 267 aa13.78□□□□□ -0.2
IFRD1-207ENST00000440625 CFTRP13569 1480 aa13.74□□□□□ -0.21
IFRD1-207ENST00000440625 WRNQ14191 1432 aaPredicted RBP eCLIP13.73□□□□□ -0.21
IFRD1-207ENST00000440625 SYNJ1O43426 1573 aa13.69□□□□□ -0.22
IFRD1-207ENST00000440625 FAM9AQ8IZU1 332 aaPredicted RBP13.68□□□□□ -0.22
IFRD1-207ENST00000440625 CADPSQ9ULU8 1353 aa13.66□□□□□ -0.22
IFRD1-207ENST00000440625 SOGA1O94964 1423 aa13.64□□□□□ -0.23
IFRD1-207ENST00000440625 TOP2BQ02880 1626 aa13.61□□□□□ -0.23
IFRD1-207ENST00000440625 RUSC2Q8N2Y8 1516 aa13.6□□□□□ -0.23
IFRD1-207ENST00000440625 BIVM-ERCC5R4GMW8 1640 aa13.6□□□□□ -0.23
IFRD1-207ENST00000440625 PRDM2Q13029 1718 aa13.59□□□□□ -0.23
IFRD1-207ENST00000440625 EEA1Q15075 1411 aa13.58□□□□□ -0.24
IFRD1-207ENST00000440625 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
IFRD1-207ENST00000440625 CUX1P39880 1505 aa13.57□□□□□ -0.24
IFRD1-207ENST00000440625 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
IFRD1-207ENST00000440625 NESP48681 1621 aa13.5□□□□□ -0.25
IFRD1-207ENST00000440625 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
IFRD1-207ENST00000440625 LAMC3Q9Y6N6 1575 aa13.47□□□□□ -0.25
IFRD1-207ENST00000440625 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
IFRD1-207ENST00000440625 TNIKQ9UKE5 1360 aa13.42□□□□□ -0.26
IFRD1-207ENST00000440625 KIF21BO75037 1637 aa13.41□□□□□ -0.26
IFRD1-207ENST00000440625 GOLGA3Q08378 1498 aa13.4□□□□□ -0.26
IFRD1-207ENST00000440625 CEP164Q9UPV0 1460 aa13.39□□□□□ -0.27
IFRD1-207ENST00000440625 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
IFRD1-207ENST00000440625 FGD5Q6ZNL6 1462 aa13.38□□□□□ -0.27
IFRD1-207ENST00000440625 TOPBP1Q92547 1522 aa13.37□□□□□ -0.27
IFRD1-207ENST00000440625 PRXQ9BXM0 1461 aa13.36□□□□□ -0.27
IFRD1-207ENST00000440625 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
IFRD1-207ENST00000440625 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
IFRD1-207ENST00000440625 URB2Q14146 1524 aaKnown RBP13.34□□□□□ -0.27
IFRD1-207ENST00000440625 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
IFRD1-207ENST00000440625 CEP162Q5TB80 1403 aa13.33□□□□□ -0.28
IFRD1-207ENST00000440625 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
IFRD1-207ENST00000440625 CUX2O14529 1486 aa13.3□□□□□ -0.28
IFRD1-207ENST00000440625 IGF1RP08069 1367 aa13.3□□□□□ -0.28
IFRD1-207ENST00000440625 ERICH3Q5RHP9 1530 aa13.29□□□□□ -0.28
IFRD1-207ENST00000440625 KIF21AQ7Z4S6 1674 aa13.29□□□□□ -0.28
IFRD1-207ENST00000440625 UBTFP17480 764 aaKnown RBP13.29□□□□□ -0.28
IFRD1-207ENST00000440625 RAD54L2Q9Y4B4 1467 aa13.29□□□□□ -0.28
IFRD1-207ENST00000440625 ABCA10Q8WWZ4 1543 aa13.29□□□□□ -0.28
IFRD1-207ENST00000440625 MSH5O43196 834 aa13.26□□□□□ -0.29
IFRD1-207ENST00000440625 WDR97A6NE52 1622 aa13.21□□□□□ -0.29
IFRD1-207ENST00000440625 PCGF6Q9BYE7 350 aa13.21□□□□□ -0.29
IFRD1-207ENST00000440625 MRC2Q9UBG0 1479 aa13.2□□□□□ -0.3
IFRD1-207ENST00000440625 CLIP1P30622 1438 aa13.2□□□□□ -0.3
IFRD1-207ENST00000440625 CARMIL1Q5VZK9 1371 aa13.2□□□□□ -0.3
IFRD1-207ENST00000440625 TRIM26Q12899 539 aaPredicted RBP13.19□□□□□ -0.3
IFRD1-207ENST00000440625 TARBP1Q13395 1621 aaKnown RBP13.17□□□□□ -0.3
IFRD1-207ENST00000440625 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
IFRD1-207ENST00000440625 WDR62O43379 1518 aa13.13□□□□□ -0.31
IFRD1-207ENST00000440625 TDRD9Q8NDG6 1382 aaKnown RBP13.13□□□□□ -0.31
IFRD1-207ENST00000440625 VPS8Q8N3P4 1428 aa13.11□□□□□ -0.31
IFRD1-207ENST00000440625 GAPVD1Q14C86 1478 aa13.1□□□□□ -0.31
IFRD1-207ENST00000440625 ARAP1Q96P48 1450 aa13.1□□□□□ -0.31
IFRD1-207ENST00000440625 CUL7Q14999 1698 aa13.09□□□□□ -0.31
IFRD1-207ENST00000440625 PPARGC1BQ86YN6 1023 aaKnown RBP13.08□□□□□ -0.32
IFRD1-207ENST00000440625 THOC2Q8NI27 1593 aaKnown RBP13.07□□□□□ -0.32
IFRD1-207ENST00000440625 ARHGAP35Q9NRY4 1499 aa13.07□□□□□ -0.32
IFRD1-207ENST00000440625 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
IFRD1-207ENST00000440625 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
IFRD1-207ENST00000440625 RANGAP1P46060 587 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms