RNA–Protein interactions for RNA: ENST00000573262.1

NME2-209, Transcript of NME/NM23 nucleoside diphosphate kinase 2, humanhuman

TSL 1 (best)

Gene NME2, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME2-209ENST00000573262 NISCHQ9Y2I1 1504 aa24.16■■□□□ 1.46
NME2-209ENST00000573262 ABCC9O60706 1549 aa21.78■■□□□ 1.08
NME2-209ENST00000573262 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
NME2-209ENST00000573262 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
NME2-209ENST00000573262 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.88
NME2-209ENST00000573262 DNAJC5BQ9UF47 199 aa20.5■□□□□ 0.87
NME2-209ENST00000573262 NACADO15069 1562 aa20.42■□□□□ 0.86
NME2-209ENST00000573262 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.85
NME2-209ENST00000573262 MYO15BQ96JP2 1530 aa20.09■□□□□ 0.81
NME2-209ENST00000573262 UNC13AQ9UPW8 1703 aa20.04■□□□□ 0.8
NME2-209ENST00000573262 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
NME2-209ENST00000573262 ZCCHC6Q5VYS8 1495 aaKnown RBP20.01■□□□□ 0.79
NME2-209ENST00000573262 DCAF1Q9Y4B6 1507 aa19.86■□□□□ 0.77
NME2-209ENST00000573262 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
NME2-209ENST00000573262 SHROOM4Q9ULL8 1493 aa19.62■□□□□ 0.73
NME2-209ENST00000573262 CECR2Q9BXF3 1484 aa19.57■□□□□ 0.72
NME2-209ENST00000573262 CC2D2AQ9P2K1 1620 aa19.57■□□□□ 0.72
NME2-209ENST00000573262 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
NME2-209ENST00000573262 NCAPD3P42695 1498 aa18.91■□□□□ 0.62
NME2-209ENST00000573262 ATAD2BQ9ULI0 1458 aa18.89■□□□□ 0.61
NME2-209ENST00000573262 SMARCA4P51532 1647 aa18.82■□□□□ 0.6
NME2-209ENST00000573262 ERCC6Q03468 1493 aa18.77■□□□□ 0.59
NME2-209ENST00000573262 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
NME2-209ENST00000573262 DNAJC5Q9H3Z4 198 aa18.73■□□□□ 0.59
NME2-209ENST00000573262 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
NME2-209ENST00000573262 NESP48681 1621 aa18.71■□□□□ 0.59
NME2-209ENST00000573262 HMGXB3Q12766 1538 aa18.71■□□□□ 0.59
NME2-209ENST00000573262 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
NME2-209ENST00000573262 MROH2BQ7Z745 1585 aa18.68■□□□□ 0.58
NME2-209ENST00000573262 CUX2O14529 1486 aa18.64■□□□□ 0.57
NME2-209ENST00000573262 PEG3Q9GZU2 1588 aa18.57■□□□□ 0.56
NME2-209ENST00000573262 LAMC3Q9Y6N6 1575 aa18.42■□□□□ 0.54
NME2-209ENST00000573262 WIZO95785 1651 aa18.41■□□□□ 0.54
NME2-209ENST00000573262 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
NME2-209ENST00000573262 CADPSQ9ULU8 1353 aa18.39■□□□□ 0.53
NME2-209ENST00000573262 THOC2Q8NI27 1593 aaKnown RBP18.38■□□□□ 0.53
NME2-209ENST00000573262 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
NME2-209ENST00000573262 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
NME2-209ENST00000573262 MRC2Q9UBG0 1479 aa18.24■□□□□ 0.51
NME2-209ENST00000573262 FANCD2Q9BXW9 1451 aa18.17■□□□□ 0.5
NME2-209ENST00000573262 CEP164Q9UPV0 1460 aa18.17■□□□□ 0.5
NME2-209ENST00000573262 WDR62O43379 1518 aa18.15■□□□□ 0.5
NME2-209ENST00000573262 TOP2AP11388 1531 aaKnown RBP18.15■□□□□ 0.5
NME2-209ENST00000573262 CFTRP13569 1480 aa18.14■□□□□ 0.5
NME2-209ENST00000573262 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
NME2-209ENST00000573262 TRIM41Q8WV44 630 aa18.03■□□□□ 0.48
NME2-209ENST00000573262 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.48
NME2-209ENST00000573262 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
NME2-209ENST00000573262 ZNF608Q9ULD9 1512 aaPredicted RBP17.85■□□□□ 0.45
NME2-209ENST00000573262 TOPBP1Q92547 1522 aa17.82■□□□□ 0.44
NME2-209ENST00000573262 IFT140Q96RY7 1462 aa17.8■□□□□ 0.44
NME2-209ENST00000573262 PRDM2Q13029 1718 aa17.76■□□□□ 0.43
NME2-209ENST00000573262 AQRO60306 1485 aaKnown RBP eCLIP17.71■□□□□ 0.431e-6■■□□□ 14.3
NME2-209ENST00000573262 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
NME2-209ENST00000573262 ABCC8Q09428 1581 aa17.7■□□□□ 0.42
NME2-209ENST00000573262 SUPT5HO00267 1087 aaKnown RBP17.66■□□□□ 0.42
NME2-209ENST00000573262 FBLN2P98095 1184 aa17.66■□□□□ 0.42
NME2-209ENST00000573262 RAD54L2Q9Y4B4 1467 aa17.65■□□□□ 0.42
NME2-209ENST00000573262 EIF4G3O43432 1585 aaKnown RBP17.65■□□□□ 0.42
NME2-209ENST00000573262 POLA1P09884 1462 aaPredicted RBP17.64■□□□□ 0.41
NME2-209ENST00000573262 TDRD9Q8NDG6 1382 aaKnown RBP17.63■□□□□ 0.41
NME2-209ENST00000573262 TARBP1Q13395 1621 aaKnown RBP17.61■□□□□ 0.41
NME2-209ENST00000573262 SOGA1O94964 1423 aa17.6■□□□□ 0.41
NME2-209ENST00000573262 RIMBP3CA6NJZ7 1639 aa17.59■□□□□ 0.41
NME2-209ENST00000573262 RIMBP3BA6NNM3 1639 aa17.59■□□□□ 0.41
NME2-209ENST00000573262 RIMBP3Q9UFD9 1639 aa17.59■□□□□ 0.41
NME2-209ENST00000573262 ARHGEF11O15085 1522 aa17.56■□□□□ 0.4
NME2-209ENST00000573262 CYB5RLQ6IPT4 315 aa17.55■□□□□ 0.4
NME2-209ENST00000573262 FGD5Q6ZNL6 1462 aa17.55■□□□□ 0.4
NME2-209ENST00000573262 CUX1P39880 1505 aa17.52■□□□□ 0.4
NME2-209ENST00000573262 CHD1O14646 1710 aa17.48■□□□□ 0.39
NME2-209ENST00000573262 SNAPC4Q5SXM2 1469 aa17.48■□□□□ 0.39
NME2-209ENST00000573262 CHMP7Q8WUX9 453 aaPredicted RBP17.47■□□□□ 0.39
NME2-209ENST00000573262 ARAP1Q96P48 1450 aa17.41■□□□□ 0.38
NME2-209ENST00000573262 GRIN2BQ13224 1484 aa17.4■□□□□ 0.38
NME2-209ENST00000573262 TRHP20396 242 aaPredicted RBP17.37■□□□□ 0.37
NME2-209ENST00000573262 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
NME2-209ENST00000573262 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
NME2-209ENST00000573262 SYNJ2O15056 1496 aa17.33■□□□□ 0.37
NME2-209ENST00000573262 WDR97A6NE52 1622 aa17.32■□□□□ 0.36
NME2-209ENST00000573262 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
NME2-209ENST00000573262 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
NME2-209ENST00000573262 SYNJ1O43426 1573 aa17.29■□□□□ 0.36
NME2-209ENST00000573262 WRNQ14191 1432 aaPredicted RBP eCLIP17.27■□□□□ 0.35
NME2-209ENST00000573262 ABCA5Q8WWZ7 1642 aa17.24■□□□□ 0.35
NME2-209ENST00000573262 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
NME2-209ENST00000573262 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
NME2-209ENST00000573262 TOP2BQ02880 1626 aa17.18■□□□□ 0.34
NME2-209ENST00000573262 BIVM-ERCC5R4GMW8 1640 aa17.14■□□□□ 0.33
NME2-209ENST00000573262 ERCC6L2Q5T890 1561 aa17.14■□□□□ 0.33
NME2-209ENST00000573262 ADAMTS12P58397 1594 aa17.13■□□□□ 0.33
NME2-209ENST00000573262 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
NME2-209ENST00000573262 CEP170Q5SW79 1584 aa17.11■□□□□ 0.33
NME2-209ENST00000573262 NUP160Q12769 1436 aa17.11■□□□□ 0.33
NME2-209ENST00000573262 ERICH3Q5RHP9 1530 aa17.05■□□□□ 0.32
NME2-209ENST00000573262 JPH4Q96JJ6 628 aa17.02■□□□□ 0.32
NME2-209ENST00000573262 PRG4Q92954 1404 aaPredicted RBP17.01■□□□□ 0.31
NME2-209ENST00000573262 SHROOM2Q13796 1616 aa16.96■□□□□ 0.3
NME2-209ENST00000573262 IGF1RP08069 1367 aa16.95■□□□□ 0.3
NME2-209ENST00000573262 KIF27Q86VH2 1401 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms