RNA–Protein interactions for RNA: ENST00000537986.1

CCDC189-203, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-203ENST00000537986 NISCHQ9Y2I1 1504 aa28.1■■■□□ 2.09
CCDC189-203ENST00000537986 CCDC180Q9P1Z9 1646 aa25.33■■□□□ 1.65
CCDC189-203ENST00000537986 ABCC9O60706 1549 aa25.28■■□□□ 1.64
CCDC189-203ENST00000537986 RB1CC1Q8TDY2 1594 aa24.09■■□□□ 1.45
CCDC189-203ENST00000537986 NACADO15069 1562 aa23.88■■□□□ 1.41
CCDC189-203ENST00000537986 DCAF8L2P0C7V8 631 aa23.78■■□□□ 1.4
CCDC189-203ENST00000537986 UNC13AQ9UPW8 1703 aa23.62■■□□□ 1.37
CCDC189-203ENST00000537986 DNAJC5BQ9UF47 199 aa23.56■■□□□ 1.36
CCDC189-203ENST00000537986 PABPN1Q86U42 306 aaKnown RBP eCLIP23.48■■□□□ 1.35
CCDC189-203ENST00000537986 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
CCDC189-203ENST00000537986 BICRAQ9NZM4 1560 aa23.31■■□□□ 1.32
CCDC189-203ENST00000537986 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
CCDC189-203ENST00000537986 DCAF1Q9Y4B6 1507 aa23.19■■□□□ 1.3
CCDC189-203ENST00000537986 SCRIBQ14160 1630 aa23.1■■□□□ 1.29
CCDC189-203ENST00000537986 SHROOM4Q9ULL8 1493 aa23.02■■□□□ 1.28
CCDC189-203ENST00000537986 CC2D2AQ9P2K1 1620 aa22.85■■□□□ 1.25
CCDC189-203ENST00000537986 EIF4G1Q04637 1599 aaKnown RBP22.79■■□□□ 1.24
CCDC189-203ENST00000537986 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
CCDC189-203ENST00000537986 SMARCA4P51532 1647 aa21.98■■□□□ 1.11
CCDC189-203ENST00000537986 NCAPD3P42695 1498 aa21.96■■□□□ 1.11
CCDC189-203ENST00000537986 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
CCDC189-203ENST00000537986 ATAD2BQ9ULI0 1458 aa21.93■■□□□ 1.1
CCDC189-203ENST00000537986 HMGXB3Q12766 1538 aa21.89■■□□□ 1.09
CCDC189-203ENST00000537986 ERCC6Q03468 1493 aa21.89■■□□□ 1.09
CCDC189-203ENST00000537986 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
CCDC189-203ENST00000537986 BAZ1BQ9UIG0 1483 aaKnown RBP21.79■■□□□ 1.08
CCDC189-203ENST00000537986 CUX2O14529 1486 aa21.77■■□□□ 1.08
CCDC189-203ENST00000537986 PEG3Q9GZU2 1588 aa21.71■■□□□ 1.07
CCDC189-203ENST00000537986 NESP48681 1621 aa21.69■■□□□ 1.06
CCDC189-203ENST00000537986 DNAJC5Q9H3Z4 198 aa21.68■■□□□ 1.06
CCDC189-203ENST00000537986 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
CCDC189-203ENST00000537986 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
CCDC189-203ENST00000537986 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
CCDC189-203ENST00000537986 THOC2Q8NI27 1593 aaKnown RBP21.52■■□□□ 1.04
CCDC189-203ENST00000537986 WIZO95785 1651 aa21.47■■□□□ 1.03
CCDC189-203ENST00000537986 PDS5BQ9NTI5 1447 aa21.42■■□□□ 1.02
CCDC189-203ENST00000537986 CADPSQ9ULU8 1353 aa21.32■■□□□ 1
CCDC189-203ENST00000537986 MRC2Q9UBG0 1479 aa21.25■□□□□ 0.99
CCDC189-203ENST00000537986 WDR62O43379 1518 aa21.19■□□□□ 0.98
CCDC189-203ENST00000537986 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
CCDC189-203ENST00000537986 TOP2AP11388 1531 aaKnown RBP21.18■□□□□ 0.98
CCDC189-203ENST00000537986 RSF1Q96T23 1441 aaPredicted RBP21.16■□□□□ 0.98
CCDC189-203ENST00000537986 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
CCDC189-203ENST00000537986 PRDM2Q13029 1718 aa21.08■□□□□ 0.97
CCDC189-203ENST00000537986 CFTRP13569 1480 aa21.07■□□□□ 0.96
CCDC189-203ENST00000537986 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
CCDC189-203ENST00000537986 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
CCDC189-203ENST00000537986 TRIM41Q8WV44 630 aa20.85■□□□□ 0.93
CCDC189-203ENST00000537986 OSCARQ8IYS5 282 aa20.74■□□□□ 0.91
CCDC189-203ENST00000537986 IFT140Q96RY7 1462 aa20.73■□□□□ 0.91
CCDC189-203ENST00000537986 TOPBP1Q92547 1522 aa20.73■□□□□ 0.91
CCDC189-203ENST00000537986 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
CCDC189-203ENST00000537986 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
CCDC189-203ENST00000537986 ZNF608Q9ULD9 1512 aaPredicted RBP20.68■□□□□ 0.9
CCDC189-203ENST00000537986 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
CCDC189-203ENST00000537986 RIMBP3CA6NJZ7 1639 aa20.57■□□□□ 0.88
CCDC189-203ENST00000537986 RIMBP3BA6NNM3 1639 aa20.57■□□□□ 0.88
CCDC189-203ENST00000537986 RIMBP3Q9UFD9 1639 aa20.57■□□□□ 0.88
CCDC189-203ENST00000537986 CHD1O14646 1710 aa20.56■□□□□ 0.88
CCDC189-203ENST00000537986 TARBP1Q13395 1621 aaKnown RBP20.55■□□□□ 0.88
CCDC189-203ENST00000537986 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
CCDC189-203ENST00000537986 AQRO60306 1485 aaKnown RBP eCLIP20.49■□□□□ 0.873e-7■■■■■ 36.6
CCDC189-203ENST00000537986 ARHGEF11O15085 1522 aa20.47■□□□□ 0.87
CCDC189-203ENST00000537986 RAD54L2Q9Y4B4 1467 aa20.43■□□□□ 0.86
CCDC189-203ENST00000537986 FBLN2P98095 1184 aa20.42■□□□□ 0.86
CCDC189-203ENST00000537986 SOGA1O94964 1423 aa20.4■□□□□ 0.86
CCDC189-203ENST00000537986 FGD5Q6ZNL6 1462 aa20.4■□□□□ 0.86
CCDC189-203ENST00000537986 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
CCDC189-203ENST00000537986 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
CCDC189-203ENST00000537986 CUX1P39880 1505 aa20.36■□□□□ 0.85
CCDC189-203ENST00000537986 SNAPC4Q5SXM2 1469 aa20.33■□□□□ 0.85
CCDC189-203ENST00000537986 PBRM1Q86U86 1689 aa20.3■□□□□ 0.84
CCDC189-203ENST00000537986 SUPT5HO00267 1087 aaKnown RBP20.3■□□□□ 0.84
CCDC189-203ENST00000537986 CYB5RLQ6IPT4 315 aa20.28■□□□□ 0.84
CCDC189-203ENST00000537986 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
CCDC189-203ENST00000537986 MAGI1Q96QZ7 1491 aaPredicted RBP20.26■□□□□ 0.83
CCDC189-203ENST00000537986 GRIN2BQ13224 1484 aa20.24■□□□□ 0.83
CCDC189-203ENST00000537986 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
CCDC189-203ENST00000537986 CHMP7Q8WUX9 453 aaPredicted RBP20.23■□□□□ 0.83
CCDC189-203ENST00000537986 CLASP1Q7Z460 1538 aa20.2■□□□□ 0.82
CCDC189-203ENST00000537986 SYNJ2O15056 1496 aa20.18■□□□□ 0.82
CCDC189-203ENST00000537986 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
CCDC189-203ENST00000537986 ABCA5Q8WWZ7 1642 aa20.16■□□□□ 0.82
CCDC189-203ENST00000537986 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
CCDC189-203ENST00000537986 TRHP20396 242 aaPredicted RBP20.13■□□□□ 0.81
CCDC189-203ENST00000537986 BIVM-ERCC5R4GMW8 1640 aa20.09■□□□□ 0.81
CCDC189-203ENST00000537986 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.8
CCDC189-203ENST00000537986 TOP2BQ02880 1626 aa20.07■□□□□ 0.8
CCDC189-203ENST00000537986 ADAMTS12P58397 1594 aa20.03■□□□□ 0.8
CCDC189-203ENST00000537986 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
CCDC189-203ENST00000537986 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
CCDC189-203ENST00000537986 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
CCDC189-203ENST00000537986 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
CCDC189-203ENST00000537986 ERCC6L2Q5T890 1561 aa19.89■□□□□ 0.77
CCDC189-203ENST00000537986 NUP160Q12769 1436 aa19.87■□□□□ 0.77
CCDC189-203ENST00000537986 SHROOM2Q13796 1616 aa19.86■□□□□ 0.77
CCDC189-203ENST00000537986 RUSC2Q8N2Y8 1516 aa19.75■□□□□ 0.75
CCDC189-203ENST00000537986 PRG4Q92954 1404 aaPredicted RBP19.73■□□□□ 0.75
CCDC189-203ENST00000537986 CUL7Q14999 1698 aa19.7■□□□□ 0.74
CCDC189-203ENST00000537986 JPH4Q96JJ6 628 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms