RNA–Protein interactions for RNA: ENST00000469420.1

CBX6-203, Transcript of chromobox 6, humanhuman

TSL 2

Gene CBX6, Length 2,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-203ENST00000469420 NISCHQ9Y2I1 1504 aa36.11■■■■□ 3.37
CBX6-203ENST00000469420 CCDC180Q9P1Z9 1646 aa30.94■■■□□ 2.54
CBX6-203ENST00000469420 ZCCHC6Q5VYS8 1495 aaKnown RBP30.51■■■□□ 2.47
CBX6-203ENST00000469420 SHROOM4Q9ULL8 1493 aa30.42■■■□□ 2.46
CBX6-203ENST00000469420 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
CBX6-203ENST00000469420 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
CBX6-203ENST00000469420 SUPT5HO00267 1087 aaKnown RBP29.64■■■□□ 2.34
CBX6-203ENST00000469420 MYO15BQ96JP2 1530 aa28.91■■■□□ 2.22
CBX6-203ENST00000469420 SCRIBQ14160 1630 aa28.88■■■□□ 2.21
CBX6-203ENST00000469420 ABCC9O60706 1549 aa28.81■■■□□ 2.2
CBX6-203ENST00000469420 CHIC1Q5VXU3 224 aa28.79■■■□□ 2.2
CBX6-203ENST00000469420 NACADO15069 1562 aa28.59■■■□□ 2.17
CBX6-203ENST00000469420 RSF1Q96T23 1441 aaPredicted RBP28.42■■■□□ 2.14
CBX6-203ENST00000469420 CECR2Q9BXF3 1484 aa28.2■■■□□ 2.11
CBX6-203ENST00000469420 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
CBX6-203ENST00000469420 MROH2BQ7Z745 1585 aa28.08■■■□□ 2.09
CBX6-203ENST00000469420 UNC13AQ9UPW8 1703 aa27.99■■■□□ 2.07
CBX6-203ENST00000469420 WIZO95785 1651 aa27.96■■■□□ 2.07
CBX6-203ENST00000469420 LOC105371045A0A1W2PR82 267 aa27.91■■■□□ 2.06
CBX6-203ENST00000469420 PCGF6Q9BYE7 350 aa27.76■■■□□ 2.03
CBX6-203ENST00000469420 BAZ1AQ9NRL2 1556 aaPredicted RBP27.74■■■□□ 2.03
CBX6-203ENST00000469420 HRCP23327 699 aa27.71■■■□□ 2.03
CBX6-203ENST00000469420 TRIM41Q8WV44 630 aa27.63■■■□□ 2.01
CBX6-203ENST00000469420 SMARCA4P51532 1647 aa27.62■■■□□ 2.01
CBX6-203ENST00000469420 BICRAQ9NZM4 1560 aa27.56■■■□□ 2
CBX6-203ENST00000469420 EIF4G1Q04637 1599 aaKnown RBP27.51■■□□□ 1.99
CBX6-203ENST00000469420 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
CBX6-203ENST00000469420 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
CBX6-203ENST00000469420 FAM9AQ8IZU1 332 aaPredicted RBP27.39■■□□□ 1.98
CBX6-203ENST00000469420 SMARCA2P51531 1590 aa27.34■■□□□ 1.97
CBX6-203ENST00000469420 CCDC88BA6NC98 1476 aa27.31■■□□□ 1.96
CBX6-203ENST00000469420 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
CBX6-203ENST00000469420 ABCC8Q09428 1581 aa27.17■■□□□ 1.94
CBX6-203ENST00000469420 PPARGC1BQ86YN6 1023 aaKnown RBP27.16■■□□□ 1.94
CBX6-203ENST00000469420 EHMT2Q96KQ7 1210 aa27.16■■□□□ 1.94
CBX6-203ENST00000469420 PEG3Q9GZU2 1588 aa27.12■■□□□ 1.93
CBX6-203ENST00000469420 ATAD2BQ9ULI0 1458 aa26.93■■□□□ 1.9
CBX6-203ENST00000469420 BAZ1BQ9UIG0 1483 aaKnown RBP26.8■■□□□ 1.88
CBX6-203ENST00000469420 SOGA1O94964 1423 aa26.79■■□□□ 1.88
CBX6-203ENST00000469420 RUSC2Q8N2Y8 1516 aa26.73■■□□□ 1.87
CBX6-203ENST00000469420 SYNJ1O43426 1573 aa26.67■■□□□ 1.86
CBX6-203ENST00000469420 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
CBX6-203ENST00000469420 ZEB1P37275 1124 aaPredicted RBP26.6■■□□□ 1.85
CBX6-203ENST00000469420 EEA1Q15075 1411 aa26.54■■□□□ 1.84
CBX6-203ENST00000469420 CEP162Q5TB80 1403 aa26.53■■□□□ 1.84
CBX6-203ENST00000469420 CSRNP3Q8WYN3 585 aa26.51■■□□□ 1.83
CBX6-203ENST00000469420 HMGXB3Q12766 1538 aa26.46■■□□□ 1.83
CBX6-203ENST00000469420 TNIKQ9UKE5 1360 aa26.46■■□□□ 1.83
CBX6-203ENST00000469420 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
CBX6-203ENST00000469420 GOLGA3Q08378 1498 aa26.37■■□□□ 1.81
CBX6-203ENST00000469420 TOP2BQ02880 1626 aa26.35■■□□□ 1.81
CBX6-203ENST00000469420 UBTFP17480 764 aaKnown RBP26.33■■□□□ 1.8
CBX6-203ENST00000469420 KIF21BO75037 1637 aa26.31■■□□□ 1.8
CBX6-203ENST00000469420 BIVM-ERCC5R4GMW8 1640 aa26.31■■□□□ 1.8
CBX6-203ENST00000469420 TTBK1Q5TCY1 1321 aaPredicted RBP26.27■■□□□ 1.8
CBX6-203ENST00000469420 CEP164Q9UPV0 1460 aa26.24■■□□□ 1.79
CBX6-203ENST00000469420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.21■■□□□ 1.79
CBX6-203ENST00000469420 RAPGEF2Q9Y4G8 1499 aa26.17■■□□□ 1.78
CBX6-203ENST00000469420 CUX1P39880 1505 aa26.17■■□□□ 1.78
CBX6-203ENST00000469420 CFTRP13569 1480 aa26.15■■□□□ 1.78
CBX6-203ENST00000469420 CCER1Q8TC90 406 aaPredicted RBP26.12■■□□□ 1.77
CBX6-203ENST00000469420 PRDM2Q13029 1718 aa26.09■■□□□ 1.77
CBX6-203ENST00000469420 CLIP1P30622 1438 aa26.04■■□□□ 1.76
CBX6-203ENST00000469420 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
CBX6-203ENST00000469420 PRXQ9BXM0 1461 aa25.96■■□□□ 1.75
CBX6-203ENST00000469420 VPS8Q8N3P4 1428 aa25.93■■□□□ 1.74
CBX6-203ENST00000469420 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
CBX6-203ENST00000469420 RANGAP1P46060 587 aaPredicted RBP25.88■■□□□ 1.73
CBX6-203ENST00000469420 CADPSQ9ULU8 1353 aa25.87■■□□□ 1.73
CBX6-203ENST00000469420 KIF27Q86VH2 1401 aa25.83■■□□□ 1.73
CBX6-203ENST00000469420 ARAP1Q96P48 1450 aa25.76■■□□□ 1.71
CBX6-203ENST00000469420 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
CBX6-203ENST00000469420 APLP2Q06481 763 aa25.69■■□□□ 1.7
CBX6-203ENST00000469420 CUX2O14529 1486 aa25.69■■□□□ 1.7
CBX6-203ENST00000469420 HNRNPUL2Q1KMD3 747 aaKnown RBP25.68■■□□□ 1.7
CBX6-203ENST00000469420 FANCD2Q9BXW9 1451 aa25.65■■□□□ 1.7
CBX6-203ENST00000469420 NESP48681 1621 aa25.64■■□□□ 1.7
CBX6-203ENST00000469420 IGF1RP08069 1367 aa25.63■■□□□ 1.69
CBX6-203ENST00000469420 ARHGAP35Q9NRY4 1499 aa25.57■■□□□ 1.68
CBX6-203ENST00000469420 DIEXFQ68CQ4 756 aaKnown RBP25.54■■□□□ 1.68
CBX6-203ENST00000469420 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
CBX6-203ENST00000469420 RAD54L2Q9Y4B4 1467 aa25.49■■□□□ 1.67
CBX6-203ENST00000469420 KANK4Q5T7N3 995 aaPredicted RBP25.49■■□□□ 1.67
CBX6-203ENST00000469420 TOPBP1Q92547 1522 aa25.49■■□□□ 1.67
CBX6-203ENST00000469420 CARMIL1Q5VZK9 1371 aa25.48■■□□□ 1.67
CBX6-203ENST00000469420 DNAJC5BQ9UF47 199 aa25.46■■□□□ 1.67
CBX6-203ENST00000469420 POLA1P09884 1462 aaPredicted RBP25.46■■□□□ 1.67
CBX6-203ENST00000469420 SCAF1Q9H7N4 1312 aaKnown RBP25.45■■□□□ 1.67
CBX6-203ENST00000469420 ABCA10Q8WWZ4 1543 aa25.4■■□□□ 1.66
CBX6-203ENST00000469420 ZNF316A6NFI3 1004 aaPredicted RBP25.39■■□□□ 1.66
CBX6-203ENST00000469420 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.65
CBX6-203ENST00000469420 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
CBX6-203ENST00000469420 WDR97A6NE52 1622 aa25.34■■□□□ 1.65
CBX6-203ENST00000469420 RRBP1Q9P2E9 1410 aaKnown RBP25.31■■□□□ 1.64
CBX6-203ENST00000469420 KIF21AQ7Z4S6 1674 aa25.28■■□□□ 1.64
CBX6-203ENST00000469420 ACIN1Q9UKV3 1341 aaKnown RBP25.25■■□□□ 1.63
CBX6-203ENST00000469420 TIAM1Q13009 1591 aa25.24■■□□□ 1.63
CBX6-203ENST00000469420 CUL7Q14999 1698 aa25.24■■□□□ 1.63
CBX6-203ENST00000469420 NEUROD1Q13562 356 aa25.24■■□□□ 1.63
CBX6-203ENST00000469420 DHX57Q6P158 1386 aaKnown RBP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms