RNA–Protein interactions for RNA: ENST00000476927.5

IFRD1-213, Transcript of interferon related developmental regulator 1, humanhuman

TSL 3

Gene IFRD1, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-213ENST00000476927 NISCHQ9Y2I1 1504 aa42.66■■■■■ 4.42
IFRD1-213ENST00000476927 CCDC180Q9P1Z9 1646 aa38.19■■■■□ 3.7
IFRD1-213ENST00000476927 ABCC9O60706 1549 aa37.91■■■■□ 3.66
IFRD1-213ENST00000476927 RB1CC1Q8TDY2 1594 aa36.24■■■■□ 3.39
IFRD1-213ENST00000476927 NACADO15069 1562 aa36.09■■■■□ 3.37
IFRD1-213ENST00000476927 MYO15BQ96JP2 1530 aa35.78■■■■□ 3.32
IFRD1-213ENST00000476927 DCAF8L2P0C7V8 631 aa35.74■■■■□ 3.31
IFRD1-213ENST00000476927 DNAJC5BQ9UF47 199 aa35.47■■■■□ 3.27
IFRD1-213ENST00000476927 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
IFRD1-213ENST00000476927 DCAF1Q9Y4B6 1507 aa35.35■■■■□ 3.25
IFRD1-213ENST00000476927 UNC13AQ9UPW8 1703 aa35.34■■■■□ 3.25
IFRD1-213ENST00000476927 PABPN1Q86U42 306 aaKnown RBP eCLIP35.32■■■■□ 3.24
IFRD1-213ENST00000476927 BICRAQ9NZM4 1560 aa35.2■■■■□ 3.23
IFRD1-213ENST00000476927 SHROOM4Q9ULL8 1493 aa34.88■■■■□ 3.17
IFRD1-213ENST00000476927 SCRIBQ14160 1630 aa34.68■■■■□ 3.14
IFRD1-213ENST00000476927 EIF4G1Q04637 1599 aaKnown RBP34.3■■■■□ 3.08
IFRD1-213ENST00000476927 CC2D2AQ9P2K1 1620 aa34.29■■■■□ 3.08
IFRD1-213ENST00000476927 CECR2Q9BXF3 1484 aa34.19■■■■□ 3.06
IFRD1-213ENST00000476927 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
IFRD1-213ENST00000476927 ATAD2BQ9ULI0 1458 aa33.23■■■□□ 2.91
IFRD1-213ENST00000476927 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
IFRD1-213ENST00000476927 SMARCA2P51531 1590 aa33.14■■■□□ 2.9
IFRD1-213ENST00000476927 BAZ1AQ9NRL2 1556 aaPredicted RBP33.09■■■□□ 2.89
IFRD1-213ENST00000476927 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
IFRD1-213ENST00000476927 PEG3Q9GZU2 1588 aa32.98■■■□□ 2.87
IFRD1-213ENST00000476927 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
IFRD1-213ENST00000476927 MROH2BQ7Z745 1585 aa32.83■■■□□ 2.85
IFRD1-213ENST00000476927 CUX2O14529 1486 aa32.72■■■□□ 2.83
IFRD1-213ENST00000476927 ERCC6Q03468 1493 aa32.72■■■□□ 2.83
IFRD1-213ENST00000476927 NESP48681 1621 aa32.63■■■□□ 2.81
IFRD1-213ENST00000476927 LAMC3Q9Y6N6 1575 aa32.52■■■□□ 2.8
IFRD1-213ENST00000476927 DNAJC5Q9H3Z4 198 aa32.5■■■□□ 2.79
IFRD1-213ENST00000476927 WIZO95785 1651 aa32.37■■■□□ 2.77
IFRD1-213ENST00000476927 PDS5BQ9NTI5 1447 aa32.34■■■□□ 2.77
IFRD1-213ENST00000476927 CADPSQ9ULU8 1353 aa32.32■■■□□ 2.76
IFRD1-213ENST00000476927 THOC2Q8NI27 1593 aaKnown RBP32.3■■■□□ 2.76
IFRD1-213ENST00000476927 RSF1Q96T23 1441 aaPredicted RBP32.26■■■□□ 2.76
IFRD1-213ENST00000476927 KIF21AQ7Z4S6 1674 aa32.18■■■□□ 2.74
IFRD1-213ENST00000476927 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
IFRD1-213ENST00000476927 MRC2Q9UBG0 1479 aa32.01■■■□□ 2.71
IFRD1-213ENST00000476927 CFTRP13569 1480 aa32■■■□□ 2.71
IFRD1-213ENST00000476927 WDR62O43379 1518 aa31.95■■■□□ 2.7
IFRD1-213ENST00000476927 FANCD2Q9BXW9 1451 aa31.9■■■□□ 2.7
IFRD1-213ENST00000476927 CEP164Q9UPV0 1460 aa31.9■■■□□ 2.7
IFRD1-213ENST00000476927 CCDC88BA6NC98 1476 aa31.7■■■□□ 2.66
IFRD1-213ENST00000476927 URB2Q14146 1524 aaKnown RBP31.62■■■□□ 2.65
IFRD1-213ENST00000476927 PRDM2Q13029 1718 aa31.57■■■□□ 2.64
IFRD1-213ENST00000476927 ABCC8Q09428 1581 aa31.34■■■□□ 2.61
IFRD1-213ENST00000476927 TOPBP1Q92547 1522 aa31.32■■■□□ 2.6
IFRD1-213ENST00000476927 IFT140Q96RY7 1462 aa31.31■■■□□ 2.6
IFRD1-213ENST00000476927 OSCARQ8IYS5 282 aa31.23■■■□□ 2.59
IFRD1-213ENST00000476927 DNMBPQ6XZF7 1577 aa31.22■■■□□ 2.59
IFRD1-213ENST00000476927 ZNF608Q9ULD9 1512 aaPredicted RBP31.17■■■□□ 2.58
IFRD1-213ENST00000476927 TARBP1Q13395 1621 aaKnown RBP31.03■■■□□ 2.56
IFRD1-213ENST00000476927 POLA1P09884 1462 aaPredicted RBP31.01■■■□□ 2.56
IFRD1-213ENST00000476927 EIF4G3O43432 1585 aaKnown RBP30.99■■■□□ 2.55
IFRD1-213ENST00000476927 TRIM41Q8WV44 630 aa30.96■■■□□ 2.55
IFRD1-213ENST00000476927 AQRO60306 1485 aaKnown RBP eCLIP30.92■■■□□ 2.544e-9■■□□□ 12.6
IFRD1-213ENST00000476927 SOGA1O94964 1423 aa30.87■■■□□ 2.53
IFRD1-213ENST00000476927 RAD54L2Q9Y4B4 1467 aa30.85■■■□□ 2.53
IFRD1-213ENST00000476927 CUX1P39880 1505 aa30.83■■■□□ 2.53
IFRD1-213ENST00000476927 SUPT5HO00267 1087 aaKnown RBP30.82■■■□□ 2.52
IFRD1-213ENST00000476927 FGD5Q6ZNL6 1462 aa30.82■■■□□ 2.52
IFRD1-213ENST00000476927 WDR97A6NE52 1622 aa30.8■■■□□ 2.52
IFRD1-213ENST00000476927 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
IFRD1-213ENST00000476927 RIMBP3CA6NJZ7 1639 aa30.73■■■□□ 2.51
IFRD1-213ENST00000476927 RIMBP3BA6NNM3 1639 aa30.73■■■□□ 2.51
IFRD1-213ENST00000476927 RIMBP3Q9UFD9 1639 aa30.73■■■□□ 2.51
IFRD1-213ENST00000476927 ARHGEF11O15085 1522 aa30.69■■■□□ 2.5
IFRD1-213ENST00000476927 CHD1O14646 1710 aa30.67■■■□□ 2.5
IFRD1-213ENST00000476927 FBLN2P98095 1184 aa30.6■■■□□ 2.49
IFRD1-213ENST00000476927 GRIN2BQ13224 1484 aa30.6■■■□□ 2.49
IFRD1-213ENST00000476927 SNAPC4Q5SXM2 1469 aa30.6■■■□□ 2.49
IFRD1-213ENST00000476927 MAGI1Q96QZ7 1491 aaPredicted RBP30.6■■■□□ 2.49
IFRD1-213ENST00000476927 ABCA10Q8WWZ4 1543 aa30.54■■■□□ 2.48
IFRD1-213ENST00000476927 GAPVD1Q14C86 1478 aa30.5■■■□□ 2.47
IFRD1-213ENST00000476927 CHMP7Q8WUX9 453 aaPredicted RBP30.49■■■□□ 2.47
IFRD1-213ENST00000476927 SYNJ2O15056 1496 aa30.49■■■□□ 2.47
IFRD1-213ENST00000476927 CLASP1Q7Z460 1538 aa30.45■■■□□ 2.47
IFRD1-213ENST00000476927 WRNQ14191 1432 aaPredicted RBP eCLIP30.45■■■□□ 2.46
IFRD1-213ENST00000476927 ABCA5Q8WWZ7 1642 aa30.44■■■□□ 2.46
IFRD1-213ENST00000476927 SYNJ1O43426 1573 aa30.41■■■□□ 2.46
IFRD1-213ENST00000476927 CYB5RLQ6IPT4 315 aa30.41■■■□□ 2.46
IFRD1-213ENST00000476927 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
IFRD1-213ENST00000476927 ARAP1Q96P48 1450 aa30.4■■■□□ 2.46
IFRD1-213ENST00000476927 BIVM-ERCC5R4GMW8 1640 aa30.39■■■□□ 2.46
IFRD1-213ENST00000476927 PBRM1Q86U86 1689 aa30.38■■■□□ 2.45
IFRD1-213ENST00000476927 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
IFRD1-213ENST00000476927 ADAMTS12P58397 1594 aa30.18■■■□□ 2.42
IFRD1-213ENST00000476927 ERICH3Q5RHP9 1530 aa30.16■■■□□ 2.42
IFRD1-213ENST00000476927 FHAD1B1AJZ9 1412 aa30.15■■■□□ 2.42
IFRD1-213ENST00000476927 NUP160Q12769 1436 aa30.13■■■□□ 2.41
IFRD1-213ENST00000476927 CEP170Q5SW79 1584 aa30.05■■■□□ 2.4
IFRD1-213ENST00000476927 TRHP20396 242 aaPredicted RBP29.96■■■□□ 2.39
IFRD1-213ENST00000476927 SHROOM2Q13796 1616 aa29.96■■■□□ 2.39
IFRD1-213ENST00000476927 ERCC6L2Q5T890 1561 aa29.9■■■□□ 2.38
IFRD1-213ENST00000476927 IGF1RP08069 1367 aa29.84■■■□□ 2.37
IFRD1-213ENST00000476927 KIF27Q86VH2 1401 aa29.83■■■□□ 2.37
IFRD1-213ENST00000476927 JPH4Q96JJ6 628 aa29.79■■■□□ 2.36
IFRD1-213ENST00000476927 PRG4Q92954 1404 aaPredicted RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms