RNA–Protein interactions for RNA: ENST00000295030.5

PEX13-201, Transcript of peroxisomal biogenesis factor 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX13, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX13-201ENST00000295030 NISCHQ9Y2I1 1504 aa14.47□□□□□ -0.09
PEX13-201ENST00000295030 SHROOM4Q9ULL8 1493 aa12.64□□□□□ -0.39
PEX13-201ENST00000295030 DCAF8L2P0C7V8 631 aa12.48□□□□□ -0.41
PEX13-201ENST00000295030 CCDC180Q9P1Z9 1646 aa12.36□□□□□ -0.43
PEX13-201ENST00000295030 SUPT5HO00267 1087 aaKnown RBP12.17□□□□□ -0.46
PEX13-201ENST00000295030 ZCCHC6Q5VYS8 1495 aaKnown RBP12.17□□□□□ -0.46
PEX13-201ENST00000295030 ABCC9O60706 1549 aa11.94□□□□□ -0.5
PEX13-201ENST00000295030 SCRIBQ14160 1630 aa11.77□□□□□ -0.53
PEX13-201ENST00000295030 MYO15BQ96JP2 1530 aa11.77□□□□□ -0.53
PEX13-201ENST00000295030 DCAF1Q9Y4B6 1507 aa11.75□□□□□ -0.53
PEX13-201ENST00000295030 CECR2Q9BXF3 1484 aa11.6□□□□□ -0.55
PEX13-201ENST00000295030 CHIC1Q5VXU3 224 aa11.6□□□□□ -0.55
PEX13-201ENST00000295030 LOC105371045A0A1W2PR82 267 aa11.54□□□□□ -0.56
PEX13-201ENST00000295030 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
PEX13-201ENST00000295030 EHMT2Q96KQ7 1210 aa11.5□□□□□ -0.57
PEX13-201ENST00000295030 RSF1Q96T23 1441 aaPredicted RBP11.48□□□□□ -0.57
PEX13-201ENST00000295030 UNC13AQ9UPW8 1703 aa11.46□□□□□ -0.57
PEX13-201ENST00000295030 RB1CC1Q8TDY2 1594 aa11.44□□□□□ -0.58
PEX13-201ENST00000295030 MROH2BQ7Z745 1585 aa11.44□□□□□ -0.58
PEX13-201ENST00000295030 WIZO95785 1651 aa11.4□□□□□ -0.58
PEX13-201ENST00000295030 FAM9AQ8IZU1 332 aaPredicted RBP11.37□□□□□ -0.59
PEX13-201ENST00000295030 NACADO15069 1562 aa11.3□□□□□ -0.6
PEX13-201ENST00000295030 BICRAQ9NZM4 1560 aa11.25□□□□□ -0.61
PEX13-201ENST00000295030 PPARGC1BQ86YN6 1023 aaKnown RBP11.17□□□□□ -0.62
PEX13-201ENST00000295030 ABCC8Q09428 1581 aa11.14□□□□□ -0.63
PEX13-201ENST00000295030 PCGF6Q9BYE7 350 aa11.11□□□□□ -0.63
PEX13-201ENST00000295030 EIF4G1Q04637 1599 aaKnown RBP11.1□□□□□ -0.63
PEX13-201ENST00000295030 TRIM41Q8WV44 630 aa11.1□□□□□ -0.63
PEX13-201ENST00000295030 SMARCA4P51532 1647 aa11.07□□□□□ -0.64
PEX13-201ENST00000295030 CCDC88BA6NC98 1476 aa11.06□□□□□ -0.64
PEX13-201ENST00000295030 DNAJC5BQ9UF47 199 aa11.06□□□□□ -0.64
PEX13-201ENST00000295030 APLP2Q06481 763 aa11.05□□□□□ -0.64
PEX13-201ENST00000295030 RUSC2Q8N2Y8 1516 aa11.05□□□□□ -0.64
PEX13-201ENST00000295030 MYT1Q01538 1121 aa11.01□□□□□ -0.65
PEX13-201ENST00000295030 BAZ1AQ9NRL2 1556 aaPredicted RBP11.01□□□□□ -0.65
PEX13-201ENST00000295030 PELP1Q8IZL8 1130 aaKnown RBP11□□□□□ -0.65
PEX13-201ENST00000295030 SMARCA2P51531 1590 aa10.99□□□□□ -0.65
PEX13-201ENST00000295030 TTBK1Q5TCY1 1321 aaPredicted RBP10.98□□□□□ -0.65
PEX13-201ENST00000295030 SOGA1O94964 1423 aa10.96□□□□□ -0.65
PEX13-201ENST00000295030 TOP2AP11388 1531 aaKnown RBP10.9□□□□□ -0.66
PEX13-201ENST00000295030 PEG3Q9GZU2 1588 aa10.87□□□□□ -0.67
PEX13-201ENST00000295030 ATAD2BQ9ULI0 1458 aa10.87□□□□□ -0.67
PEX13-201ENST00000295030 RANGAP1P46060 587 aaPredicted RBP10.85□□□□□ -0.67
PEX13-201ENST00000295030 SYNJ1O43426 1573 aa10.82□□□□□ -0.68
PEX13-201ENST00000295030 UBTFP17480 764 aaKnown RBP10.76□□□□□ -0.69
PEX13-201ENST00000295030 BAZ1BQ9UIG0 1483 aaKnown RBP10.75□□□□□ -0.69
PEX13-201ENST00000295030 HRCP23327 699 aa10.73□□□□□ -0.69
PEX13-201ENST00000295030 NESP48681 1621 aa10.67□□□□□ -0.7
PEX13-201ENST00000295030 WRNQ14191 1432 aaPredicted RBP eCLIP10.67□□□□□ -0.7
PEX13-201ENST00000295030 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
PEX13-201ENST00000295030 RAPGEF2Q9Y4G8 1499 aa10.62□□□□□ -0.71
PEX13-201ENST00000295030 CSRNP3Q8WYN3 585 aa10.62□□□□□ -0.71
PEX13-201ENST00000295030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
PEX13-201ENST00000295030 TRIM26Q12899 539 aaPredicted RBP10.62□□□□□ -0.71
PEX13-201ENST00000295030 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
PEX13-201ENST00000295030 CUX1P39880 1505 aa10.6□□□□□ -0.71
PEX13-201ENST00000295030 CEP162Q5TB80 1403 aa10.59□□□□□ -0.71
PEX13-201ENST00000295030 NCAPD3P42695 1498 aa10.57□□□□□ -0.72
PEX13-201ENST00000295030 ATP1B4Q9UN42 357 aaPredicted RBP10.55□□□□□ -0.72
PEX13-201ENST00000295030 PRDM2Q13029 1718 aa10.54□□□□□ -0.72
PEX13-201ENST00000295030 FBLN2P98095 1184 aa10.53□□□□□ -0.72
PEX13-201ENST00000295030 EEA1Q15075 1411 aa10.51□□□□□ -0.73
PEX13-201ENST00000295030 CFTRP13569 1480 aa10.49□□□□□ -0.73
PEX13-201ENST00000295030 TOP2BQ02880 1626 aa10.49□□□□□ -0.73
PEX13-201ENST00000295030 RAD54L2Q9Y4B4 1467 aa10.48□□□□□ -0.73
PEX13-201ENST00000295030 HMGXB3Q12766 1538 aa10.48□□□□□ -0.73
PEX13-201ENST00000295030 KANK4Q5T7N3 995 aaPredicted RBP10.48□□□□□ -0.73
PEX13-201ENST00000295030 ZEB1P37275 1124 aaPredicted RBP10.46□□□□□ -0.74
PEX13-201ENST00000295030 P3H3Q8IVL6 736 aa10.46□□□□□ -0.74
PEX13-201ENST00000295030 PDS5BQ9NTI5 1447 aa10.45□□□□□ -0.74
PEX13-201ENST00000295030 BIVM-ERCC5R4GMW8 1640 aa10.44□□□□□ -0.74
PEX13-201ENST00000295030 HNRNPUL2Q1KMD3 747 aaKnown RBP10.44□□□□□ -0.74
PEX13-201ENST00000295030 TNIKQ9UKE5 1360 aa10.44□□□□□ -0.74
PEX13-201ENST00000295030 ARAP1Q96P48 1450 aa10.41□□□□□ -0.74
PEX13-201ENST00000295030 CADPSQ9ULU8 1353 aa10.41□□□□□ -0.74
PEX13-201ENST00000295030 CLIP1P30622 1438 aa10.4□□□□□ -0.75
PEX13-201ENST00000295030 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
PEX13-201ENST00000295030 GOLGA3Q08378 1498 aa10.39□□□□□ -0.75
PEX13-201ENST00000295030 CDK11AQ9UQ88 783 aaPredicted RBP10.39□□□□□ -0.75
PEX13-201ENST00000295030 KIF21BO75037 1637 aa10.39□□□□□ -0.75
PEX13-201ENST00000295030 IGF1RP08069 1367 aa10.37□□□□□ -0.75
PEX13-201ENST00000295030 PRXQ9BXM0 1461 aa10.37□□□□□ -0.75
PEX13-201ENST00000295030 TRHP20396 242 aaPredicted RBP10.37□□□□□ -0.75
PEX13-201ENST00000295030 CUX2O14529 1486 aa10.36□□□□□ -0.75
PEX13-201ENST00000295030 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
PEX13-201ENST00000295030 TDRD9Q8NDG6 1382 aaKnown RBP10.36□□□□□ -0.75
PEX13-201ENST00000295030 URB2Q14146 1524 aaKnown RBP10.34□□□□□ -0.75
PEX13-201ENST00000295030 SLC24A1O60721 1099 aa10.34□□□□□ -0.75
PEX13-201ENST00000295030 KIF27Q86VH2 1401 aa10.34□□□□□ -0.75
PEX13-201ENST00000295030 KIF21AQ7Z4S6 1674 aa10.33□□□□□ -0.76
PEX13-201ENST00000295030 CEP164Q9UPV0 1460 aa10.33□□□□□ -0.76
PEX13-201ENST00000295030 POLA1P09884 1462 aaPredicted RBP10.31□□□□□ -0.76
PEX13-201ENST00000295030 NPM1P06748 294 aaKnown RBP eCLIP10.31□□□□□ -0.76
PEX13-201ENST00000295030 MYT1LQ9UL68 1186 aa10.3□□□□□ -0.76
PEX13-201ENST00000295030 ARHGAP35Q9NRY4 1499 aa10.3□□□□□ -0.76
PEX13-201ENST00000295030 ARID3CA6NKF2 412 aa10.3□□□□□ -0.76
PEX13-201ENST00000295030 ITGAEP38570 1179 aa10.29□□□□□ -0.76
PEX13-201ENST00000295030 CHMP7Q8WUX9 453 aaPredicted RBP10.29□□□□□ -0.76
PEX13-201ENST00000295030 TOPBP1Q92547 1522 aa10.28□□□□□ -0.76
PEX13-201ENST00000295030 CCER1Q8TC90 406 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms