Protein–RNA interactions for Protein: Q00653

NFKB2, Nuclear factor NF-kappa-B p100 subunit, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB2Q00653 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
NFKB2Q00653 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB2Q00653 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
NFKB2Q00653 AC093827.2-201ENST00000512654 315 ntBASIC20.35■□□□□ 0.85
NFKB2Q00653 MIR4651-201ENST00000582622 73 ntBASIC20.35■□□□□ 0.85
NFKB2Q00653 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.35■□□□□ 0.85
NFKB2Q00653 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.35■□□□□ 0.85
NFKB2Q00653 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.35■□□□□ 0.85
NFKB2Q00653 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.35■□□□□ 0.85
NFKB2Q00653 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB2Q00653 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB2Q00653 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB2Q00653 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB2Q00653 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB2Q00653 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB2Q00653 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB2Q00653 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NFKB2Q00653 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NFKB2Q00653 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.34■□□□□ 0.85
NFKB2Q00653 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.34■□□□□ 0.85
NFKB2Q00653 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.34■□□□□ 0.85
NFKB2Q00653 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.34■□□□□ 0.85
NFKB2Q00653 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.34■□□□□ 0.85
NFKB2Q00653 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.34■□□□□ 0.85
NFKB2Q00653 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.34■□□□□ 0.85
NFKB2Q00653 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
NFKB2Q00653 AC007225.1-201ENST00000566331 1836 ntBASIC20.34■□□□□ 0.85
NFKB2Q00653 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
NFKB2Q00653 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NFKB2Q00653 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NFKB2Q00653 AC092667.1-201ENST00000434301 2586 ntBASIC20.34■□□□□ 0.85
NFKB2Q00653 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB2Q00653 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
NFKB2Q00653 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB2Q00653 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB2Q00653 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB2Q00653 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB2Q00653 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB2Q00653 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.33■□□□□ 0.85
NFKB2Q00653 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.33■□□□□ 0.85
NFKB2Q00653 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.33■□□□□ 0.85
NFKB2Q00653 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.33■□□□□ 0.85
NFKB2Q00653 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
NFKB2Q00653 AC011767.1-201ENST00000617410 1153 ntBASIC20.33■□□□□ 0.85
NFKB2Q00653 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NFKB2Q00653 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NFKB2Q00653 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
NFKB2Q00653 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NFKB2Q00653 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
NFKB2Q00653 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
NFKB2Q00653 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.32■□□□□ 0.84
NFKB2Q00653 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NFKB2Q00653 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NFKB2Q00653 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB2Q00653 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.32■□□□□ 0.84
NFKB2Q00653 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB2Q00653 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NFKB2Q00653 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.32■□□□□ 0.84
NFKB2Q00653 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
NFKB2Q00653 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NFKB2Q00653 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NFKB2Q00653 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
NFKB2Q00653 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NFKB2Q00653 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NFKB2Q00653 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
NFKB2Q00653 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.31■□□□□ 0.84
NFKB2Q00653 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
NFKB2Q00653 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.31■□□□□ 0.84
NFKB2Q00653 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.31■□□□□ 0.84
NFKB2Q00653 KRT18P6-201ENST00000555540 1265 ntBASIC20.31■□□□□ 0.84
NFKB2Q00653 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.31■□□□□ 0.84
NFKB2Q00653 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NFKB2Q00653 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.31■□□□□ 0.84
NFKB2Q00653 AC027702.1-201ENST00000563810 1770 ntBASIC20.31■□□□□ 0.84
NFKB2Q00653 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.31■□□□□ 0.84
NFKB2Q00653 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 AC011484.1-201ENST00000377652 1995 ntBASIC20.3■□□□□ 0.84
NFKB2Q00653 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NFKB2Q00653 AC061975.6-201ENST00000579045 1553 ntBASIC20.3■□□□□ 0.84
NFKB2Q00653 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.3■□□□□ 0.84
NFKB2Q00653 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms