Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM17P0DL12 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SMIM17P0DL12 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM17P0DL12 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM17P0DL12 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM17P0DL12 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.27■□□□□ 0.04
SMIM17P0DL12 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SMIM17P0DL12 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.27■□□□□ 0.04
SMIM17P0DL12 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
SMIM17P0DL12 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SMIM17P0DL12 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.27■□□□□ 0.03
SMIM17P0DL12 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SMIM17P0DL12 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.26■□□□□ 0.03
SMIM17P0DL12 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.26■□□□□ 0.03
SMIM17P0DL12 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 SRD5A1P1-201ENST00000442297 786 ntBASIC15.26■□□□□ 0.03
SMIM17P0DL12 AC009299.2-201ENST00000482477 511 ntBASIC15.26■□□□□ 0.03
SMIM17P0DL12 MIR3181-201ENST00000578512 73 ntBASIC15.26■□□□□ 0.03
SMIM17P0DL12 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SMIM17P0DL12 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.26■□□□□ 0.03
SMIM17P0DL12 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.26■□□□□ 0.03
SMIM17P0DL12 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
SMIM17P0DL12 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SMIM17P0DL12 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC15.26■□□□□ 0.03
SMIM17P0DL12 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SMIM17P0DL12 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SMIM17P0DL12 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SMIM17P0DL12 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC15.24■□□□□ 0.03
SMIM17P0DL12 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SMIM17P0DL12 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.24■□□□□ 0.03
SMIM17P0DL12 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SMIM17P0DL12 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM17P0DL12 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 UNC93B8-201ENST00000511903 705 ntBASIC15.24■□□□□ 0.03
SMIM17P0DL12 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM17P0DL12 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM17P0DL12 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 AC020763.4-201ENST00000623414 4170 ntBASIC15.24■□□□□ 0.03
SMIM17P0DL12 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.24■□□□□ 0.03
SMIM17P0DL12 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMIM17P0DL12 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms