Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO1P00395 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO1P00395 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO1P00395 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO1P00395 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO1P00395 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-CO1P00395 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO1P00395 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-CO1P00395 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
MT-CO1P00395 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO1P00395 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-CO1P00395 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO1P00395 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MT-CO1P00395 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-CO1P00395 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-CO1P00395 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.07■□□□□ 0.96
MT-CO1P00395 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-CO1P00395 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MT-CO1P00395 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
MT-CO1P00395 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.07■□□□□ 0.96
MT-CO1P00395 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
MT-CO1P00395 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-CO1P00395 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
MT-CO1P00395 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.06■□□□□ 0.96
MT-CO1P00395 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-CO1P00395 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
MT-CO1P00395 AC010980.2-201ENST00000587099 1412 ntBASIC21.06■□□□□ 0.96
MT-CO1P00395 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-CO1P00395 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
MT-CO1P00395 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-CO1P00395 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-CO1P00395 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
MT-CO1P00395 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.06■□□□□ 0.96
MT-CO1P00395 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
MT-CO1P00395 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.06■□□□□ 0.96
MT-CO1P00395 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.06■□□□□ 0.96
MT-CO1P00395 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-CO1P00395 AC005229.4-201ENST00000610085 2198 ntBASIC21.06■□□□□ 0.96
MT-CO1P00395 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-CO1P00395 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MT-CO1P00395 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
MT-CO1P00395 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MT-CO1P00395 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.05■□□□□ 0.96
MT-CO1P00395 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.05■□□□□ 0.96
MT-CO1P00395 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
MT-CO1P00395 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MT-CO1P00395 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 MIPEPP3-201ENST00000412105 444 ntBASIC21.05■□□□□ 0.96
MT-CO1P00395 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.05■□□□□ 0.96
MT-CO1P00395 CDV3P1-201ENST00000471403 739 ntBASIC21.05■□□□□ 0.96
MT-CO1P00395 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.05■□□□□ 0.96
MT-CO1P00395 AC098934.4-201ENST00000564127 592 ntBASIC21.05■□□□□ 0.96
MT-CO1P00395 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.05■□□□□ 0.96
MT-CO1P00395 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MT-CO1P00395 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-CO1P00395 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
MT-CO1P00395 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-CO1P00395 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-CO1P00395 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.04■□□□□ 0.96
MT-CO1P00395 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.04■□□□□ 0.96
MT-CO1P00395 FAM21FP-204ENST00000608637 956 ntBASIC21.04■□□□□ 0.96
MT-CO1P00395 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.04■□□□□ 0.96
MT-CO1P00395 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
MT-CO1P00395 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.04■□□□□ 0.96
MT-CO1P00395 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-CO1P00395 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-CO1P00395 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MT-CO1P00395 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
MT-CO1P00395 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
MT-CO1P00395 AF106564.1-201ENST00000607058 2553 ntBASIC21.03■□□□□ 0.96
MT-CO1P00395 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
MT-CO1P00395 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-CO1P00395 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.03■□□□□ 0.96
MT-CO1P00395 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-CO1P00395 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-CO1P00395 AC007322.3-201ENST00000426526 701 ntBASIC21.03■□□□□ 0.96
MT-CO1P00395 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.03■□□□□ 0.96
MT-CO1P00395 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
MT-CO1P00395 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-CO1P00395 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-CO1P00395 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MT-CO1P00395 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.03■□□□□ 0.96
MT-CO1P00395 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-CO1P00395 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MT-CO1P00395 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MT-CO1P00395 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.02■□□□□ 0.96
MT-CO1P00395 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MT-CO1P00395 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
MT-CO1P00395 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms