Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 AF106564.1-201ENST00000607058 2553 ntBASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HLA-DRB4X5D2U9 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 NAA20-201ENST00000310450 920 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 AC026271.2-201ENST00000428091 497 ntBASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
HLA-DRB4X5D2U9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 NTF6G-201ENST00000591094 616 ntBASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
HLA-DRB4X5D2U9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DRB4X5D2U9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DRB4X5D2U9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DRB4X5D2U9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
HLA-DRB4X5D2U9 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
HLA-DRB4X5D2U9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 KRT18P61-201ENST00000585825 1298 ntBASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 MIR5787-201ENST00000611784 55 ntBASIC15.44■□□□□ 0.06
HLA-DRB4X5D2U9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms