Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
CYSTM1Q9H1C7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 AC020907.5-201ENST00000624372 1936 ntBASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CYSTM1Q9H1C7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 OXCT2P1-201ENST00000447263 1535 ntBASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 AC135776.1-201ENST00000319817 2481 ntBASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.06□□□□□ -0.48
CYSTM1Q9H1C7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CYSTM1Q9H1C7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms