Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.77■□□□□ 0.59
CLDN22Q8N7P3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN22Q8N7P3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLDN22Q8N7P3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CLDN22Q8N7P3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CLDN22Q8N7P3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 AC105265.2-201ENST00000467189 838 ntBASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLDN22Q8N7P3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN22Q8N7P3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 AL162377.1-201ENST00000618844 1793 ntBASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 AP004607.4-201ENST00000530158 1459 ntBASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN22Q8N7P3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 TPRG1LP1-201ENST00000598702 760 ntBASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 AL354811.1-201ENST00000610286 706 ntBASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN22Q8N7P3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 AL391422.3-201ENST00000603791 2761 ntBASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CLDN22Q8N7P3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN22Q8N7P3 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms