Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 ADAT3-202ENST00000454697 983 ntTSL 315.44■□□□□ 0.061e-6■■□□□ 14.1
EWSR1Q01844 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.16■□□□□ 0.021e-6■■□□□ 14.1
EWSR1Q01844 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.011e-6■■□□□ 14.1
EWSR1Q01844 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.42□□□□□ -0.11e-6■■□□□ 14.1
EWSR1Q01844 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.87□□□□□ -0.191e-6■■□□□ 14.1
EWSR1Q01844 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.281e-6■■□□□ 14.1
EWSR1Q01844 TSC2-225ENST00000569110 1687 ntTSL 513.28□□□□□ -0.281e-6■■□□□ 14.1
EWSR1Q01844 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.331e-6■■□□□ 14.1
EWSR1Q01844 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.411e-6■■□□□ 14.1
EWSR1Q01844 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.77□□□□□ -0.521e-7■■□□□ 14.1
EWSR1Q01844 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.531e-6■■□□□ 14.1
EWSR1Q01844 SH3BP2-213ENST00000508385 876 ntTSL 311□□□□□ -0.651e-6■■□□□ 14.1
EWSR1Q01844 ARFGAP1-219ENST00000524192 980 ntTSL 210.77□□□□□ -0.691e-6■■□□□ 14.1
EWSR1Q01844 ARFGAP1-223ENST00000550188 572 ntTSL 59□□□□□ -0.971e-6■■□□□ 14.1
EWSR1Q01844 SH3BP2-224ENST00000513020 868 ntTSL 38.74□□□□□ -1.011e-6■■□□□ 14.1
EWSR1Q01844 CHMP6-202ENST00000571457 552 ntTSL 38.49□□□□□ -1.052e-12■■□□□ 14.1
EWSR1Q01844 MPC1-205ENST00000487218 918 ntTSL 54.72□□□□□ -1.651e-6■■□□□ 14.1
EWSR1Q01844 MPC1-204ENST00000475708 651 ntTSL 51.99□□□□□ -2.091e-6■■□□□ 14.1
EWSR1Q01844 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.096e-7■■□□□ 14.1
EWSR1Q01844 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.442e-6■■□□□ 14.1
EWSR1Q01844 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.462e-6■■□□□ 14.1
EWSR1Q01844 NUBP2-209ENST00000566090 708 ntTSL 215.98■□□□□ 0.154e-7■■□□□ 14.1
EWSR1Q01844 NUBP2-204ENST00000563821 2235 nt15.93■□□□□ 0.144e-7■■□□□ 14.1
EWSR1Q01844 NUBP2-210ENST00000566447 511 ntTSL 415.44■□□□□ 0.064e-7■■□□□ 14.1
EWSR1Q01844 MICALL2-209ENST00000479007 1855 ntTSL 216.22■□□□□ 0.191e-7■■□□□ 14.1
EWSR1Q01844 MICALL2-205ENST00000467783 639 ntTSL 313.12□□□□□ -0.311e-7■■□□□ 14.1
EWSR1Q01844 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.551e-6■■□□□ 14.1
EWSR1Q01844 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.014e-7■■□□□ 14.1
EWSR1Q01844 GATD1-212ENST00000530209 600 ntTSL 410.19□□□□□ -0.782e-6■■□□□ 14.1
EWSR1Q01844 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.28□□□□□ -0.287e-7■■□□□ 14.1
EWSR1Q01844 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.377e-7■■□□□ 14.1
EWSR1Q01844 PPP2R3B-206ENST00000477110 5802 ntTSL 1 (best)16.63■□□□□ 0.254e-6■■□□□ 14.1
EWSR1Q01844 PPP2R3B-209ENST00000484364 732 ntTSL 213.17□□□□□ -0.34e-6■■□□□ 14.1
EWSR1Q01844 PPP2R3B-207ENST00000477636 519 ntTSL 511.94□□□□□ -0.54e-6■■□□□ 14.1
EWSR1Q01844 PPP2R3B-204ENST00000468169 713 ntTSL 310.39□□□□□ -0.754e-6■■□□□ 14.1
EWSR1Q01844 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.23■□□□□ 0.993e-13■■□□□ 14
EWSR1Q01844 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC21.16■□□□□ 0.983e-13■■□□□ 14
EWSR1Q01844 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC20.77■□□□□ 0.923e-13■■□□□ 14
EWSR1Q01844 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC20.77■□□□□ 0.923e-13■■□□□ 14
EWSR1Q01844 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.53■□□□□ 0.723e-13■■□□□ 14
EWSR1Q01844 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.83□□□□□ -0.043e-13■■□□□ 14
EWSR1Q01844 AC008537.1-201ENST00000601627 575 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.821e-6■■□□□ 14
EWSR1Q01844 UBAC1-202ENST00000465873 882 ntTSL 211.93□□□□□ -0.52e-13■■□□□ 14
EWSR1Q01844 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.361e-6■■□□□ 14
EWSR1Q01844 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.361e-6■■□□□ 14
EWSR1Q01844 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.211e-6■■□□□ 14
EWSR1Q01844 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.86□□□□□ -0.031e-6■■□□□ 14
EWSR1Q01844 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.171e-6■■□□□ 14
EWSR1Q01844 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.171e-6■■□□□ 14
EWSR1Q01844 MED15-229ENST00000489651 3563 ntTSL 1 (best)10.15□□□□□ -0.795e-10■■□□□ 14
EWSR1Q01844 MED15-230ENST00000492381 3619 ntTSL 29.32□□□□□ -0.925e-10■■□□□ 14
EWSR1Q01844 MED15-226ENST00000478831 707 ntTSL 48.59□□□□□ -1.035e-10■■□□□ 14
EWSR1Q01844 TCF25-223ENST00000568870 263 ntTSL 210.68□□□□□ -0.72e-6■■□□□ 14
EWSR1Q01844 TCF25-219ENST00000566751 383 ntTSL 56.11□□□□□ -1.432e-6■■□□□ 14
EWSR1Q01844 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.292e-7■■□□□ 14
EWSR1Q01844 MED15-211ENST00000433831 3267 ntTSL 512.47□□□□□ -0.412e-7■■□□□ 14
EWSR1Q01844 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.36□□□□□ -0.432e-7■■□□□ 14
EWSR1Q01844 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.9□□□□□ -0.52e-7■■□□□ 14
EWSR1Q01844 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.62e-7■■□□□ 14
EWSR1Q01844 LINC01089-204ENST00000535643 1014 ntTSL 1 (best)10.09□□□□□ -0.793e-6■■□□□ 14
EWSR1Q01844 KMT5A-209ENST00000537270 352 ntTSL 512.85□□□□□ -0.358e-8■■□□□ 14
EWSR1Q01844 ORC4-211ENST00000490200 563 ntTSL 414.06□□□□□ -0.161e-6■■□□□ 13.9
EWSR1Q01844 ORC4-204ENST00000440042 552 ntTSL 313.94□□□□□ -0.181e-6■■□□□ 13.9
EWSR1Q01844 ORC4-206ENST00000461711 528 ntTSL 412.79□□□□□ -0.361e-6■■□□□ 13.9
EWSR1Q01844 FADS2-215ENST00000574708 385 ntTSL 3 BASIC10.83□□□□□ -0.682e-9■■□□□ 13.9
EWSR1Q01844 ORC4-205ENST00000457954 647 ntTSL 48.53□□□□□ -1.041e-6■■□□□ 13.9
EWSR1Q01844 ORC4-212ENST00000495601 611 ntTSL 27.7□□□□□ -1.181e-6■■□□□ 13.9
EWSR1Q01844 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.571e-6■■□□□ 13.9
EWSR1Q01844 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.73□□□□□ -1.651e-6■■□□□ 13.9
EWSR1Q01844 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.841e-6■■□□□ 13.9
EWSR1Q01844 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.48□□□□□ -1.851e-6■■□□□ 13.9
EWSR1Q01844 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.871e-6■■□□□ 13.9
EWSR1Q01844 ORC4-213ENST00000496670 645 ntTSL 52.21□□□□□ -2.061e-6■■□□□ 13.9
EWSR1Q01844 ORC4-203ENST00000416719 571 ntTSL 32.06□□□□□ -2.081e-6■■□□□ 13.9
EWSR1Q01844 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC16.98■□□□□ 0.312e-6■■□□□ 13.9
EWSR1Q01844 LINC01089-201ENST00000428029 1024 ntTSL 213.98□□□□□ -0.172e-6■■□□□ 13.9
EWSR1Q01844 LINC01089-210ENST00000543167 1059 ntTSL 212.92□□□□□ -0.342e-6■■□□□ 13.9
EWSR1Q01844 RHOF-206ENST00000545544 826 ntTSL 512.16□□□□□ -0.462e-6■■□□□ 13.9
EWSR1Q01844 RHOF-205ENST00000541657 1626 ntTSL 512.11□□□□□ -0.472e-6■■□□□ 13.9
EWSR1Q01844 LINC01089-208ENST00000541694 875 ntTSL 211.63□□□□□ -0.552e-6■■□□□ 13.9
EWSR1Q01844 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.63□□□□□ -0.552e-6■■□□□ 13.9
EWSR1Q01844 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.473e-7■■□□□ 13.9
EWSR1Q01844 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC9.94□□□□□ -0.823e-7■■□□□ 13.9
EWSR1Q01844 NFIC-207ENST00000589164 435 ntTSL 310.08□□□□□ -0.82e-6■■□□□ 13.9
EWSR1Q01844 SSBP3-201ENST00000326956 2913 ntTSL 212.73□□□□□ -0.372e-6■■□□□ 13.9
EWSR1Q01844 ANAPC2-207ENST00000495611 747 ntTSL 213.97□□□□□ -0.174e-7■■□□□ 13.8
EWSR1Q01844 ATP13A3-205ENST00000457986 490 ntTSL 318.17■□□□□ 0.52e-6■■□□□ 13.8
EWSR1Q01844 RBM14-208ENST00000496694 562 ntTSL 55.31□□□□□ -1.565e-12■■□□□ 13.8
EWSR1Q01844 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.852e-6■■□□□ 13.8
EWSR1Q01844 EEF1D-210ENST00000525223 610 ntTSL 311.55□□□□□ -0.568e-7■■□□□ 13.8
EWSR1Q01844 MED15-210ENST00000432052 598 ntTSL 415.64■□□□□ 0.092e-6■■□□□ 13.8
EWSR1Q01844 MED15-225ENST00000477824 571 ntTSL 515.31■□□□□ 0.042e-6■■□□□ 13.8
EWSR1Q01844 MED15-215ENST00000444094 551 ntTSL 414.48□□□□□ -0.092e-6■■□□□ 13.8
EWSR1Q01844 MED15-205ENST00000414658 717 ntTSL 313.66□□□□□ -0.222e-6■■□□□ 13.8
EWSR1Q01844 MED15-227ENST00000486656 577 ntTSL 413.66□□□□□ -0.222e-6■■□□□ 13.8
EWSR1Q01844 MED15-214ENST00000441501 840 ntTSL 312.43□□□□□ -0.422e-6■■□□□ 13.8
EWSR1Q01844 MED15-217ENST00000445987 590 ntTSL 411.84□□□□□ -0.512e-6■■□□□ 13.8
EWSR1Q01844 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.75□□□□□ -1.971e-6■■□□□ 13.8
EWSR1Q01844 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.38■□□□□ 0.212e-6■■□□□ 13.8
EWSR1Q01844 SEMA7A-204ENST00000567345 674 ntTSL 414.7□□□□□ -0.062e-6■■□□□ 13.8
Retrieved 100 of 7,101 protein–RNA pairs in 42.2 ms