Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC2O95347 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
SMC2O95347 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.24■■□□□ 1.31
SMC2O95347 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.24■■□□□ 1.31
SMC2O95347 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.24■■□□□ 1.31
SMC2O95347 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC2O95347 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SMC2O95347 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SMC2O95347 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.24■■□□□ 1.31
SMC2O95347 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
SMC2O95347 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.24■■□□□ 1.31
SMC2O95347 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMC2O95347 AC061975.6-201ENST00000579045 1553 ntBASIC23.23■■□□□ 1.31
SMC2O95347 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMC2O95347 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
SMC2O95347 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.23■■□□□ 1.31
SMC2O95347 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMC2O95347 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMC2O95347 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.23■■□□□ 1.31
SMC2O95347 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.23■■□□□ 1.31
SMC2O95347 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMC2O95347 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SMC2O95347 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.23■■□□□ 1.31
SMC2O95347 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SMC2O95347 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC23.23■■□□□ 1.31
SMC2O95347 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC23.22■■□□□ 1.31
SMC2O95347 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC2O95347 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC2O95347 AC007225.1-201ENST00000566331 1836 ntBASIC23.22■■□□□ 1.31
SMC2O95347 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC2O95347 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC2O95347 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMC2O95347 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SMC2O95347 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC2O95347 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC23.22■■□□□ 1.31
SMC2O95347 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
SMC2O95347 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SMC2O95347 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SMC2O95347 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.21■■□□□ 1.31
SMC2O95347 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC23.21■■□□□ 1.31
SMC2O95347 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.21■■□□□ 1.31
SMC2O95347 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SMC2O95347 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC23.21■■□□□ 1.31
SMC2O95347 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SMC2O95347 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.21■■□□□ 1.31
SMC2O95347 AC142381.2-201ENST00000566120 298 ntBASIC23.21■■□□□ 1.31
SMC2O95347 AC008175.2-201ENST00000612840 297 ntBASIC23.21■■□□□ 1.31
SMC2O95347 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.21■■□□□ 1.31
SMC2O95347 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.21■■□□□ 1.31
SMC2O95347 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SMC2O95347 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.21■■□□□ 1.31
SMC2O95347 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SMC2O95347 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
SMC2O95347 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.31
SMC2O95347 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
SMC2O95347 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SMC2O95347 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.2■■□□□ 1.3
SMC2O95347 POU5F1P4-201ENST00000413175 1085 ntBASIC23.2■■□□□ 1.3
SMC2O95347 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.2■■□□□ 1.3
SMC2O95347 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
SMC2O95347 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.2■■□□□ 1.3
SMC2O95347 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SMC2O95347 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SMC2O95347 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SMC2O95347 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SMC2O95347 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SMC2O95347 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC2O95347 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC2O95347 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC2O95347 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMC2O95347 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SMC2O95347 AC079140.4-201ENST00000507448 529 ntBASIC23.19■■□□□ 1.3
SMC2O95347 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SMC2O95347 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.19■■□□□ 1.3
SMC2O95347 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.19■■□□□ 1.3
SMC2O95347 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC2O95347 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SMC2O95347 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms