Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 NUDCD3-210ENST00000493613 613 ntTSL 311.21□□□□□ -0.619e-6■■■■□ 23
MATR3P43243 HERC4-207ENST00000460168 2215 ntTSL 211.17□□□□□ -0.629e-6■■■■□ 23
MATR3P43243 RNASET2-208ENST00000496851 881 ntTSL 510.92□□□□□ -0.669e-6■■■■□ 23
MATR3P43243 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC10.6□□□□□ -0.719e-6■■■■□ 23
MATR3P43243 MCFD2-207ENST00000409913 3975 ntTSL 1 (best) BASIC10.5□□□□□ -0.739e-6■■■■□ 23
MATR3P43243 VPS13B-206ENST00000496144 5625 ntTSL 59.52□□□□□ -0.899e-6■■■■□ 23
MATR3P43243 ADAM10-214ENST00000559053 541 ntTSL 49.51□□□□□ -0.899e-6■■■■□ 23
MATR3P43243 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.999e-6■■■■□ 23
MATR3P43243 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.029e-6■■■■□ 23
MATR3P43243 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.039e-6■■■■□ 23
MATR3P43243 KIAA0753-202ENST00000542826 1572 ntTSL 28.25□□□□□ -1.099e-6■■■■□ 23
MATR3P43243 SNX13-208ENST00000482558 1139 ntTSL 28.15□□□□□ -1.17e-6■■■■□ 23
MATR3P43243 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.219e-6■■■■□ 23
MATR3P43243 HSD17B12-210ENST00000534053 583 ntTSL 27.46□□□□□ -1.229e-6■■■■□ 23
MATR3P43243 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.43□□□□□ -1.229e-6■■■■□ 23
MATR3P43243 KIAA0753-209ENST00000575027 753 ntTSL 47.41□□□□□ -1.229e-6■■■■□ 23
MATR3P43243 CHSY1-205ENST00000561143 819 ntTSL 27.19□□□□□ -1.269e-6■■■■□ 23
MATR3P43243 ADAM10-211ENST00000497846 647 ntTSL 47.19□□□□□ -1.269e-6■■■■□ 23
MATR3P43243 HERC4-206ENST00000427635 6391 ntTSL 26.93□□□□□ -1.39e-6■■■■□ 23
MATR3P43243 HERC4-209ENST00000473533 3593 ntTSL 1 (best)6.74□□□□□ -1.339e-6■■■■□ 23
MATR3P43243 VPS13B-211ENST00000522802 570 ntTSL 36.73□□□□□ -1.339e-6■■■■□ 23
MATR3P43243 ADAM10-210ENST00000482945 2333 ntTSL 26.25□□□□□ -1.419e-6■■■■□ 23
MATR3P43243 N4BP2L2-209ENST00000503296 2315 ntTSL 25.91□□□□□ -1.469e-6■■■■□ 23
MATR3P43243 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.89□□□□□ -1.479e-6■■■■□ 23
MATR3P43243 ADAM10-208ENST00000475898 674 ntTSL 45.52□□□□□ -1.539e-6■■■■□ 23
MATR3P43243 HSD17B12-209ENST00000533802 511 ntTSL 35.51□□□□□ -1.539e-6■■■■□ 23
MATR3P43243 KIAA0753-204ENST00000570790 3403 ntTSL 25.27□□□□□ -1.579e-6■■■■□ 23
MATR3P43243 UBE3A-206ENST00000604860 571 ntTSL 55.07□□□□□ -1.69e-6■■■■□ 23
MATR3P43243 UBE3A-211ENST00000626176 445 ntTSL 34.88□□□□□ -1.639e-6■■■■□ 23
MATR3P43243 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.649e-6■■■■□ 23
MATR3P43243 COPB2-210ENST00000512309 565 ntTSL 54.75□□□□□ -1.653e-6■■■■□ 23
MATR3P43243 HSD17B12-208ENST00000533090 2507 ntTSL 24.56□□□□□ -1.689e-6■■■■□ 23
MATR3P43243 ADAM10-206ENST00000462061 436 ntTSL 34.16□□□□□ -1.749e-6■■■■□ 23
MATR3P43243 SHPRH-205ENST00000433355 11660 ntTSL 1 (best)4.03□□□□□ -1.769e-6■■■■□ 23
MATR3P43243 ADAM10-202ENST00000396136 2418 ntTSL 1 (best)3.93□□□□□ -1.789e-6■■■■□ 23
MATR3P43243 ADAM10-207ENST00000470269 1693 ntTSL 1 (best)3.75□□□□□ -1.819e-6■■■■□ 23
MATR3P43243 N4BP2L2-203ENST00000380121 2807 ntTSL 1 (best)3.42□□□□□ -1.869e-6■■■■□ 23
MATR3P43243 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.18□□□□□ -1.99e-6■■■■□ 23
MATR3P43243 ADAM10-209ENST00000481164 750 ntTSL 32.91□□□□□ -1.949e-6■■■■□ 23
MATR3P43243 KIAA0753-210ENST00000576281 508 ntAPPRIS ALT2 TSL 52.74□□□□□ -1.979e-6■■■■□ 23
MATR3P43243 TBL1XR1-222ENST00000631253 4186 ntTSL 52.65□□□□□ -1.999e-6■■■■□ 23
MATR3P43243 SND1-204ENST00000465900 630 ntTSL 46.71□□□□□ -1.349e-7■■■■□ 23
MATR3P43243 PHF14-214ENST00000521747 2479 ntTSL 225.07■■□□□ 1.61e-6■■■■□ 23
MATR3P43243 PHF14-202ENST00000423760 2627 ntTSL 223.98■■□□□ 1.438e-7■■■■□ 23
MATR3P43243 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.912e-6■■■■□ 23
MATR3P43243 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.412e-6■■■■□ 23
MATR3P43243 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.368e-7■■■■□ 23
MATR3P43243 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.56■□□□□ 0.241e-6■■■■□ 23
MATR3P43243 PHF14-208ENST00000481418 792 ntTSL 38.07□□□□□ -1.126e-7■■■■□ 23
MATR3P43243 PHF14-204ENST00000470665 1005 ntTSL 23.74□□□□□ -1.815e-7■■■■□ 23
MATR3P43243 AF127936.2-202ENST00000454128 816 ntTSL 510.46□□□□□ -0.739e-7■■■■□ 23
MATR3P43243 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.91□□□□□ -0.989e-7■■■■□ 23
MATR3P43243 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.351e-6■■■■□ 23
MATR3P43243 LRRD1-202ENST00000422722 3511 ntTSL 213.7□□□□□ -0.221e-6■■■■□ 23
MATR3P43243 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC7.38□□□□□ -1.231e-6■■■■□ 23
MATR3P43243 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.265e-7■■■■□ 22.9
MATR3P43243 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.08■□□□□ 0.485e-7■■■■□ 22.9
MATR3P43243 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.165e-7■■■■□ 22.9
MATR3P43243 ARID4B-205ENST00000421364 5151 ntTSL 1 (best)14.45□□□□□ -0.15e-7■■■■□ 22.9
MATR3P43243 ARID4B-212ENST00000491632 3823 ntTSL 1 (best)12.93□□□□□ -0.345e-7■■■■□ 22.9
MATR3P43243 ACTN1-213ENST00000554508 585 ntTSL 49.53□□□□□ -0.881e-6■■■■□ 22.9
MATR3P43243 CCDC26-203ENST00000523151 1496 ntTSL 1 (best)9.26□□□□□ -0.936e-7■■■■□ 22.9
MATR3P43243 CCDC26-202ENST00000520048 904 ntTSL 39.21□□□□□ -0.946e-7■■■■□ 22.9
MATR3P43243 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.49□□□□□ -1.376e-7■■■■□ 22.9
MATR3P43243 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.936e-6■■■■□ 22.9
MATR3P43243 CHCHD6-207ENST00000514908 713 ntTSL 320.78■□□□□ 0.926e-6■■■■□ 22.9
MATR3P43243 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.96e-6■■■■□ 22.9
MATR3P43243 CHCHD6-202ENST00000503119 1148 ntTSL 1 (best)20.53■□□□□ 0.886e-6■■■■□ 22.9
MATR3P43243 CHCHD6-206ENST00000513253 690 ntTSL 312.34□□□□□ -0.436e-6■■■■□ 22.9
MATR3P43243 LEPR-206ENST00000462765 2117 ntTSL 1 (best)18.77■□□□□ 0.62e-7■■■■□ 22.9
MATR3P43243 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC14.16□□□□□ -0.142e-7■■■■□ 22.9
MATR3P43243 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.555e-7■■■■□ 22.9
MATR3P43243 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.455e-7■■■■□ 22.9
MATR3P43243 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.325e-7■■■■□ 22.9
MATR3P43243 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.295e-7■■■■□ 22.9
MATR3P43243 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC12.6□□□□□ -0.395e-7■■■■□ 22.9
MATR3P43243 CUX1-204ENST00000393824 2331 ntTSL 2 BASIC12.18□□□□□ -0.465e-7■■■■□ 22.9
MATR3P43243 CUX1-212ENST00000547394 2878 ntTSL 2 BASIC12.16□□□□□ -0.465e-7■■■■□ 22.9
MATR3P43243 CUX1-205ENST00000425244 2776 ntTSL 2 BASIC11.76□□□□□ -0.535e-7■■■■□ 22.9
MATR3P43243 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC11.66□□□□□ -0.545e-7■■■■□ 22.9
MATR3P43243 CUX1-203ENST00000360264 13762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.595e-7■■■■□ 22.9
MATR3P43243 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.655e-7■■■■□ 22.9
MATR3P43243 CUX1-206ENST00000437600 3031 ntTSL 1 (best) BASIC10.5□□□□□ -0.735e-7■■■■□ 22.9
MATR3P43243 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.811e-6■■■■□ 22.9
MATR3P43243 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.591e-6■■■■□ 22.9
MATR3P43243 HSF2-203ENST00000465214 642 ntTSL 23.67□□□□□ -1.821e-6■■■■□ 22.9
MATR3P43243 RSRC1-214ENST00000496268 1039 ntTSL 310.15□□□□□ -0.781e-6■■■■□ 22.9
MATR3P43243 BACH1-208ENST00000468059 663 ntTSL 34.98□□□□□ -1.619e-7■■■■□ 22.9
MATR3P43243 BACH1-203ENST00000422809 850 ntTSL 54.98□□□□□ -1.619e-7■■■■□ 22.9
MATR3P43243 CHD4-214ENST00000545942 1317 ntTSL 1 (best)24.84■■□□□ 1.572e-6■■■■□ 22.9
MATR3P43243 CHD4-213ENST00000545584 553 ntTSL 421.76■■□□□ 1.072e-6■■■■□ 22.9
MATR3P43243 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.52e-6■■■■□ 22.9
MATR3P43243 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.332e-6■■■■□ 22.9
MATR3P43243 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC14.93□□□□□ -0.022e-6■■■■□ 22.9
MATR3P43243 CENPC-201ENST00000273853 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.548e-7■■■■□ 22.9
MATR3P43243 CENPC-203ENST00000506882 3436 ntTSL 1 (best)11.41□□□□□ -0.588e-7■■■■□ 22.9
MATR3P43243 AC020687.1-201ENST00000560439 448 ntTSL 3 BASIC9.78□□□□□ -0.846e-7■■■■□ 22.9
MATR3P43243 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.92■■■□□ 2.063e-6■■■■□ 22.9
MATR3P43243 PCM1-209ENST00000518930 575 ntTSL 326.58■■□□□ 1.854e-7■■■■□ 22.9
MATR3P43243 MPP6-206ENST00000432190 982 ntTSL 325.98■■□□□ 1.753e-6■■■■□ 22.9
Retrieved 100 of 16,209 protein–RNA pairs in 96.9 ms