RNA–Protein interactions for RNA: ENST00000626176.2

UBE3A-211, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 3

Gene UBE3A, Length 445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-211ENST00000626176 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
UBE3A-211ENST00000626176 CHIC1Q5VXU3 224 aa22.7■■□□□ 1.22
UBE3A-211ENST00000626176 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
UBE3A-211ENST00000626176 PHF23Q9BUL5 403 aaPredicted RBP20.41■□□□□ 0.86
UBE3A-211ENST00000626176 FOXD1Q16676 465 aa19.4■□□□□ 0.7
UBE3A-211ENST00000626176 POTEDQ86YR6 584 aa18.79■□□□□ 0.6
UBE3A-211ENST00000626176 MSH5O43196 834 aa18.42■□□□□ 0.54
UBE3A-211ENST00000626176 PIAS4Q8N2W9 510 aaPredicted RBP18.04■□□□□ 0.48
UBE3A-211ENST00000626176 PLPPR3Q6T4P5 718 aa17.79■□□□□ 0.44
UBE3A-211ENST00000626176 PPP6R1Q9UPN7 881 aa17.7■□□□□ 0.42
UBE3A-211ENST00000626176 ADRA2BP18089 450 aa17.63■□□□□ 0.41
UBE3A-211ENST00000626176 DMRT2Q9Y5R5 561 aa16.39■□□□□ 0.21
UBE3A-211ENST00000626176 MAPK8IP2Q13387 824 aaPredicted RBP16.33■□□□□ 0.2
UBE3A-211ENST00000626176 SCAF1Q9H7N4 1312 aaKnown RBP16.22■□□□□ 0.19
UBE3A-211ENST00000626176 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
UBE3A-211ENST00000626176 DCAF8L1A6NGE4 600 aa15.77■□□□□ 0.12
UBE3A-211ENST00000626176 RNF39Q9H2S5 420 aa15.61■□□□□ 0.09
UBE3A-211ENST00000626176 HOXD11P31277 338 aaPredicted RBP15.58■□□□□ 0.08
UBE3A-211ENST00000626176 PPP4R3CPQ6ZMV5 832 aa15.5■□□□□ 0.07
UBE3A-211ENST00000626176 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
UBE3A-211ENST00000626176 CNKSR2Q8WXI2 1034 aa15.35■□□□□ 0.05
UBE3A-211ENST00000626176 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
UBE3A-211ENST00000626176 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
UBE3A-211ENST00000626176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.86□□□□□ -0.03
UBE3A-211ENST00000626176 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
UBE3A-211ENST00000626176 POTEHQ6S545 545 aa14.64□□□□□ -0.07
UBE3A-211ENST00000626176 NPM3O75607 178 aaKnown RBP14.54□□□□□ -0.08
UBE3A-211ENST00000626176 U3KPZ7 1027 aaPredicted RBP14.47□□□□□ -0.09
UBE3A-211ENST00000626176 CAPN15O75808 1086 aa14.45□□□□□ -0.1
UBE3A-211ENST00000626176 DSG3P32926 999 aa14.45□□□□□ -0.1
UBE3A-211ENST00000626176 SPINK5Q9NQ38 1064 aaPredicted RBP14.4□□□□□ -0.1
UBE3A-211ENST00000626176 APLP2Q06481 763 aa14.1□□□□□ -0.15
UBE3A-211ENST00000626176 TRHP20396 242 aaPredicted RBP14.08□□□□□ -0.16
UBE3A-211ENST00000626176 ZNF219Q9P2Y4 722 aaPredicted RBP14.06□□□□□ -0.16
UBE3A-211ENST00000626176 ABCB7O75027 752 aa14.05□□□□□ -0.16
UBE3A-211ENST00000626176 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
UBE3A-211ENST00000626176 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
UBE3A-211ENST00000626176 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
UBE3A-211ENST00000626176 RBM42Q9BTD8 480 aaKnown RBP13.86□□□□□ -0.19
UBE3A-211ENST00000626176 SAMD1Q6SPF0 538 aaPredicted RBP13.82□□□□□ -0.2
UBE3A-211ENST00000626176 KCNA4P22459 653 aa13.78□□□□□ -0.2
UBE3A-211ENST00000626176 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
UBE3A-211ENST00000626176 POLA2Q14181 598 aa13.58□□□□□ -0.24
UBE3A-211ENST00000626176 MYCNP04198 464 aaPredicted RBP13.5□□□□□ -0.25
UBE3A-211ENST00000626176 SP7Q8TDD2 431 aaPredicted RBP13.49□□□□□ -0.25
UBE3A-211ENST00000626176 AKT1S1Q96B36 256 aa13.4□□□□□ -0.26
UBE3A-211ENST00000626176 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
UBE3A-211ENST00000626176 PIP4P2Q8N4L2 257 aa13.27□□□□□ -0.29
UBE3A-211ENST00000626176 REM2Q8IYK8 340 aaPredicted RBP13.26□□□□□ -0.29
UBE3A-211ENST00000626176 HAX1O00165 279 aa13.19□□□□□ -0.3
UBE3A-211ENST00000626176 OSCARQ8IYS5 282 aa13.17□□□□□ -0.3
UBE3A-211ENST00000626176 ATF5Q9Y2D1 282 aaPredicted RBP13.16□□□□□ -0.3
UBE3A-211ENST00000626176 PITPNM1O00562 1244 aa13.13□□□□□ -0.31
UBE3A-211ENST00000626176 FXR2P51116 673 aaKnown RBP eCLIP13.11□□□□□ -0.31
UBE3A-211ENST00000626176 FOXD4L1Q9NU39 408 aa13.06□□□□□ -0.32
UBE3A-211ENST00000626176 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
UBE3A-211ENST00000626176 EVX2Q03828 476 aa12.92□□□□□ -0.34
UBE3A-211ENST00000626176 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
UBE3A-211ENST00000626176 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
UBE3A-211ENST00000626176 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
UBE3A-211ENST00000626176 PRKAR2AP13861 404 aaKnown RBP12.8□□□□□ -0.36
UBE3A-211ENST00000626176 FBLN2P98095 1184 aa12.77□□□□□ -0.37
UBE3A-211ENST00000626176 SPDYE1Q8NFV5 336 aaPredicted RBP12.74□□□□□ -0.37
UBE3A-211ENST00000626176 CLEC11AQ9Y240 323 aa12.74□□□□□ -0.37
UBE3A-211ENST00000626176 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
UBE3A-211ENST00000626176 ATXN8OSP0DMR3 200 aa12.71□□□□□ -0.37
UBE3A-211ENST00000626176 GABBR2O75899 941 aa12.65□□□□□ -0.38
UBE3A-211ENST00000626176 LHX8Q68G74 356 aa12.64□□□□□ -0.39
UBE3A-211ENST00000626176 ZBTB22O15209 634 aa12.63□□□□□ -0.39
UBE3A-211ENST00000626176 ZNF692Q9BU19 519 aaPredicted RBP12.59□□□□□ -0.39
UBE3A-211ENST00000626176 SSUH2Q9Y2M2 353 aa12.57□□□□□ -0.4
UBE3A-211ENST00000626176 MKRN4PQ13434 485 aaPredicted RBP12.53□□□□□ -0.4
UBE3A-211ENST00000626176 CHADLQ6NUI6 762 aa12.52□□□□□ -0.41
UBE3A-211ENST00000626176 PRR29P0C7W0 189 aa12.45□□□□□ -0.42
UBE3A-211ENST00000626176 PABPN1Q86U42 306 aaKnown RBP eCLIP12.37□□□□□ -0.43
UBE3A-211ENST00000626176 CD44P16070 742 aaKnown RBP12.36□□□□□ -0.43
UBE3A-211ENST00000626176 POTEIP0CG38 1075 aa12.34□□□□□ -0.43
UBE3A-211ENST00000626176 CLCN6P51797 869 aa12.34□□□□□ -0.43
UBE3A-211ENST00000626176 FARP1Q9Y4F1 1045 aaPredicted RBP12.29□□□□□ -0.44
UBE3A-211ENST00000626176 PLSCR2Q9NRY7 297 aa12.27□□□□□ -0.45
UBE3A-211ENST00000626176 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
UBE3A-211ENST00000626176 ZNF579Q8NAF0 562 aaKnown RBP12.14□□□□□ -0.47
UBE3A-211ENST00000626176 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
UBE3A-211ENST00000626176 GALR2O43603 387 aaPredicted RBP12.02□□□□□ -0.49
UBE3A-211ENST00000626176 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
UBE3A-211ENST00000626176 CREBZFQ9NS37 354 aa11.99□□□□□ -0.49
UBE3A-211ENST00000626176 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.49
UBE3A-211ENST00000626176 PAK3O75914 559 aaPredicted RBP11.95□□□□□ -0.5
UBE3A-211ENST00000626176 POTEMA6NI47 508 aa11.94□□□□□ -0.5
UBE3A-211ENST00000626176 POTEB2H3BUK9 544 aa11.93□□□□□ -0.5
UBE3A-211ENST00000626176 POTEGQ6S5H5 508 aa11.87□□□□□ -0.51
UBE3A-211ENST00000626176 PHF12Q96QT6 1004 aa11.87□□□□□ -0.51
UBE3A-211ENST00000626176 NPM1P06748 294 aaKnown RBP eCLIP11.81□□□□□ -0.52
UBE3A-211ENST00000626176 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
UBE3A-211ENST00000626176 PCDH10Q9P2E7 1040 aa11.8□□□□□ -0.52
UBE3A-211ENST00000626176 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
UBE3A-211ENST00000626176 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
UBE3A-211ENST00000626176 SLC39A7Q92504 469 aa11.74□□□□□ -0.53
UBE3A-211ENST00000626176 SPDYE4A6NLX3 237 aa11.72□□□□□ -0.53
UBE3A-211ENST00000626176 C7P10643 843 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms