Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 DAPP1-203ENST00000512369 1440 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
NPIPA3F8WFD2 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
NPIPA3F8WFD2 THAP12P2-201ENST00000489193 2267 ntBASIC8.87□□□□□ -0.99
NPIPA3F8WFD2 SEC16B-201ENST00000308284 3985 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
NPIPA3F8WFD2 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
NPIPA3F8WFD2 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 LRRTM4-202ENST00000409093 2247 ntAPPRIS P3 TSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 ZFP57-201ENST00000376881 1359 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 SCMH1-201ENST00000326197 3275 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 VWA3B-213ENST00000477737 4454 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 MARF1-211ENST00000551742 5900 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 SSFA2-203ENST00000409136 3610 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 PRIMPOL-202ENST00000503752 2168 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AC002451.2-201ENST00000624998 2398 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 FBXO8-201ENST00000393674 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 GLI1-207ENST00000543426 3394 ntTSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 PSMC1P10-201ENST00000434820 1327 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 IDO1-207ENST00000522495 1709 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 HSPA8P8-201ENST00000419827 1942 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 MIR4290HG-201ENST00000426593 2720 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 TIAM2-210ENST00000528391 3349 ntTSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 PAK6-201ENST00000260404 3865 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 TRO-204ENST00000375041 3488 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 IFIT3-202ENST00000371818 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AL022100.1-201ENST00000636624 1678 ntTSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 MPDU1-204ENST00000423172 888 ntTSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AC130710.1-202ENST00000428280 853 ntTSL 3 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AC022400.1-201ENST00000434147 445 ntTSL 3 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 KCNMB2-AS1-204ENST00000437488 964 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 KIAA1456-202ENST00000447063 983 ntTSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AL020994.1-201ENST00000454387 578 ntTSL 4 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 GPN1-209ENST00000503738 984 ntTSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 ALDH1L1-AS1-201ENST00000512384 437 ntTSL 3 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AC209005.1-201ENST00000514043 464 ntTSL 3 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 BOLA3P1-201ENST00000530713 355 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AP003392.1-201ENST00000531087 523 ntTSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AL079307.2-201ENST00000557308 448 ntTSL 3 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 PABPN1-208ENST00000557702 778 ntTSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 TRIM16-214ENST00000579219 999 ntTSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AC020905.1-201ENST00000587777 575 ntTSL 4 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AC009303.2-209ENST00000588733 853 ntTSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 LINC00649-209ENST00000597626 612 ntTSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AC008013.3-201ENST00000605711 675 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AL354872.2-201ENST00000607679 466 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 MIR6848-201ENST00000611213 70 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 HIST1H4G-201ENST00000611444 297 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 TP53TG1_1.1-201ENST00000612852 152 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 ZFAS1-210ENST00000623640 732 ntTSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AL138828.1-206ENST00000625353 811 ntTSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 OR4K14-202ENST00000641793 1245 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AL450306.1-201ENST00000434097 2028 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AL158071.4-201ENST00000608358 4125 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 TBC1D7-221ENST00000607658 1649 ntTSL 3 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 CALCOCO2-203ENST00000416445 1438 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 LINC01964-201ENST00000567718 3137 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 FGF11-203ENST00000575082 2315 ntTSL 2 BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AC132154.1-201ENST00000623248 2134 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 AL359752.1-201ENST00000566949 1359 ntBASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 HIF1A-202ENST00000337138 3919 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
NPIPA3F8WFD2 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 PTPRVP-201ENST00000482597 3999 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 CSRP3-201ENST00000265968 1342 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 NIF3L1-202ENST00000409020 1680 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 CACNB2-209ENST00000396576 4464 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 DCTN1-226ENST00000628224 4485 ntTSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 CX3CR1-206ENST00000542107 3215 ntAPPRIS P1 TSL 4 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 JPX-201ENST00000414209 2194 ntTSL 2 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 SAMMSON-218ENST00000641601 1847 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 DNMBP-204ENST00000636706 5437 ntTSL 2 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 SLC25A14-201ENST00000218197 1616 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 DEFA3-201ENST00000327857 498 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 MRPL55-204ENST00000348259 661 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 IGKV1D-12-201ENST00000377032 371 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 IL31-201ENST00000377035 904 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 MIR629-201ENST00000385230 97 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 RNA5SP377-201ENST00000390852 112 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 RNA5SP376-201ENST00000390949 112 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 PTMA-202ENST00000409115 1221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 RN7SKP120-201ENST00000410761 341 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AC145543.1-201ENST00000424770 586 ntTSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AC104794.1-201ENST00000425235 312 ntTSL 3 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 SDHAP1-203ENST00000427149 706 ntTSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 MRPS14-202ENST00000476371 2115 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 MKRN1-211ENST00000480552 906 ntTSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 RN7SL344P-201ENST00000485522 296 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 RN7SL397P-201ENST00000487309 298 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AC008696.1-201ENST00000502593 615 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AC106795.2-202ENST00000507072 551 ntTSL 5 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 GAPDHP60-201ENST00000513846 995 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AC025437.6-201ENST00000518624 935 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AC104232.1-201ENST00000522106 875 ntTSL 3 BASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 TAGLN2P1-201ENST00000524097 587 ntBASIC8.85□□□□□ -0.99
NPIPA3F8WFD2 AP001767.1-201ENST00000530976 286 ntBASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms