RNA–Protein interactions for RNA: ENST00000260404.8

PAK6-201, Transcript of p21 (RAC1) activated kinase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PAK6, Length 3,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK6-201ENST00000260404 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
PAK6-201ENST00000260404 DCAF8L2P0C7V8 631 aa18.09■□□□□ 0.49
PAK6-201ENST00000260404 SHROOM4Q9ULL8 1493 aa17.53■□□□□ 0.4
PAK6-201ENST00000260404 SUPT5HO00267 1087 aaKnown RBP17.28■□□□□ 0.36
PAK6-201ENST00000260404 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
PAK6-201ENST00000260404 ABCC9O60706 1549 aa16.25■□□□□ 0.19
PAK6-201ENST00000260404 FAM9AQ8IZU1 332 aaPredicted RBP16.23■□□□□ 0.19
PAK6-201ENST00000260404 PCGF6Q9BYE7 350 aa15.99■□□□□ 0.15
PAK6-201ENST00000260404 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
PAK6-201ENST00000260404 TTBK1Q5TCY1 1321 aaPredicted RBP15.87■□□□□ 0.13
PAK6-201ENST00000260404 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
PAK6-201ENST00000260404 ZCCHC6Q5VYS8 1495 aaKnown RBP15.84■□□□□ 0.13
PAK6-201ENST00000260404 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
PAK6-201ENST00000260404 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.12
PAK6-201ENST00000260404 RANGAP1P46060 587 aaPredicted RBP15.76■□□□□ 0.11
PAK6-201ENST00000260404 PPARGC1BQ86YN6 1023 aaKnown RBP15.71■□□□□ 0.11
PAK6-201ENST00000260404 CCDC180Q9P1Z9 1646 aa15.65■□□□□ 0.1
PAK6-201ENST00000260404 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
PAK6-201ENST00000260404 UBTFP17480 764 aaKnown RBP15.43■□□□□ 0.06
PAK6-201ENST00000260404 HRCP23327 699 aa15.31■□□□□ 0.04
PAK6-201ENST00000260404 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
PAK6-201ENST00000260404 RSF1Q96T23 1441 aaPredicted RBP15.21■□□□□ 0.03
PAK6-201ENST00000260404 ATP1B4Q9UN42 357 aaPredicted RBP15.21■□□□□ 0.03
PAK6-201ENST00000260404 MYO15BQ96JP2 1530 aa15.2■□□□□ 0.02
PAK6-201ENST00000260404 APLP2Q06481 763 aa15.18■□□□□ 0.02
PAK6-201ENST00000260404 CCER1Q8TC90 406 aaPredicted RBP15.15■□□□□ 0.02
PAK6-201ENST00000260404 TRIM26Q12899 539 aaPredicted RBP15.11■□□□□ 0.01
PAK6-201ENST00000260404 RB1CC1Q8TDY2 1594 aa15.02■□□□□ -0
PAK6-201ENST00000260404 DCAF1Q9Y4B6 1507 aa15.02□□□□□ -0.01
PAK6-201ENST00000260404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.02□□□□□ -0.01
PAK6-201ENST00000260404 NACADO15069 1562 aa15□□□□□ -0.01
PAK6-201ENST00000260404 ITGAEP38570 1179 aa14.95□□□□□ -0.02
PAK6-201ENST00000260404 MROH2BQ7Z745 1585 aa14.95□□□□□ -0.02
PAK6-201ENST00000260404 HNRNPUL2Q1KMD3 747 aaKnown RBP14.93□□□□□ -0.02
PAK6-201ENST00000260404 YTHDC1Q96MU7 727 aaKnown RBP14.92□□□□□ -0.02
PAK6-201ENST00000260404 CSRNP3Q8WYN3 585 aa14.87□□□□□ -0.03
PAK6-201ENST00000260404 P3H3Q8IVL6 736 aa14.83□□□□□ -0.04
PAK6-201ENST00000260404 ZEB1P37275 1124 aaPredicted RBP14.78□□□□□ -0.04
PAK6-201ENST00000260404 WIZO95785 1651 aa14.75□□□□□ -0.05
PAK6-201ENST00000260404 ARID3CA6NKF2 412 aa14.74□□□□□ -0.05
PAK6-201ENST00000260404 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
PAK6-201ENST00000260404 FBLN2P98095 1184 aa14.66□□□□□ -0.06
PAK6-201ENST00000260404 ABCC8Q09428 1581 aa14.66□□□□□ -0.06
PAK6-201ENST00000260404 CCDC88BA6NC98 1476 aa14.65□□□□□ -0.06
PAK6-201ENST00000260404 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
PAK6-201ENST00000260404 SOGA1O94964 1423 aa14.63□□□□□ -0.07
PAK6-201ENST00000260404 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
PAK6-201ENST00000260404 WRNQ14191 1432 aaPredicted RBP eCLIP14.56□□□□□ -0.08
PAK6-201ENST00000260404 FAM50AQ14320 339 aaKnown RBP14.54□□□□□ -0.08
PAK6-201ENST00000260404 CENPBP07199 599 aaPredicted RBP14.51□□□□□ -0.09
PAK6-201ENST00000260404 DIEXFQ68CQ4 756 aaKnown RBP14.51□□□□□ -0.09
PAK6-201ENST00000260404 RUSC2Q8N2Y8 1516 aa14.47□□□□□ -0.09
PAK6-201ENST00000260404 CNGB1Q14028 1251 aaPredicted RBP14.46□□□□□ -0.1
PAK6-201ENST00000260404 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
PAK6-201ENST00000260404 ATAD2BQ9ULI0 1458 aa14.43□□□□□ -0.1
PAK6-201ENST00000260404 SMARCA4P51532 1647 aa14.43□□□□□ -0.1
PAK6-201ENST00000260404 CEP162Q5TB80 1403 aa14.41□□□□□ -0.1
PAK6-201ENST00000260404 MYT1Q01538 1121 aa14.39□□□□□ -0.11
PAK6-201ENST00000260404 NEUROD1Q13562 356 aa14.37□□□□□ -0.11
PAK6-201ENST00000260404 TOP2AP11388 1531 aaKnown RBP14.37□□□□□ -0.11
PAK6-201ENST00000260404 CLIP1P30622 1438 aa14.36□□□□□ -0.11
PAK6-201ENST00000260404 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
PAK6-201ENST00000260404 SCAF1Q9H7N4 1312 aaKnown RBP14.3□□□□□ -0.12
PAK6-201ENST00000260404 SMARCA2P51531 1590 aa14.27□□□□□ -0.13
PAK6-201ENST00000260404 GOLGA3Q08378 1498 aa14.26□□□□□ -0.13
PAK6-201ENST00000260404 MYT1LQ9UL68 1186 aa14.25□□□□□ -0.13
PAK6-201ENST00000260404 TNIKQ9UKE5 1360 aa14.25□□□□□ -0.13
PAK6-201ENST00000260404 BICRAQ9NZM4 1560 aa14.25□□□□□ -0.13
PAK6-201ENST00000260404 TDRD9Q8NDG6 1382 aaKnown RBP14.25□□□□□ -0.13
PAK6-201ENST00000260404 TRIM52Q96A61 297 aa14.24□□□□□ -0.13
PAK6-201ENST00000260404 POLR3GLQ9BT43 218 aa14.24□□□□□ -0.13
PAK6-201ENST00000260404 CUX2O14529 1486 aa14.24□□□□□ -0.13
PAK6-201ENST00000260404 ZNF777Q9ULD5 760 aaPredicted RBP14.23□□□□□ -0.13
PAK6-201ENST00000260404 CHIC2Q9UKJ5 165 aa14.23□□□□□ -0.13
PAK6-201ENST00000260404 KANK4Q5T7N3 995 aaPredicted RBP14.22□□□□□ -0.13
PAK6-201ENST00000260404 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
PAK6-201ENST00000260404 ZNF316A6NFI3 1004 aaPredicted RBP14.18□□□□□ -0.14
PAK6-201ENST00000260404 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
PAK6-201ENST00000260404 CADPSQ9ULU8 1353 aa14.18□□□□□ -0.14
PAK6-201ENST00000260404 RAPGEF2Q9Y4G8 1499 aa14.17□□□□□ -0.14
PAK6-201ENST00000260404 CHMP7Q8WUX9 453 aaPredicted RBP14.16□□□□□ -0.14
PAK6-201ENST00000260404 CEP164Q9UPV0 1460 aa14.16□□□□□ -0.14
PAK6-201ENST00000260404 EIF4G1Q04637 1599 aaKnown RBP14.16□□□□□ -0.14
PAK6-201ENST00000260404 EEA1Q15075 1411 aa14.15□□□□□ -0.14
PAK6-201ENST00000260404 HIRIP3Q9BW71 556 aaPredicted RBP14.15□□□□□ -0.14
PAK6-201ENST00000260404 BCANQ96GW7 911 aa14.15□□□□□ -0.15
PAK6-201ENST00000260404 CARMIL1Q5VZK9 1371 aa14.14□□□□□ -0.15
PAK6-201ENST00000260404 ZNF326Q5BKZ1 582 aaKnown RBP14.11□□□□□ -0.15
PAK6-201ENST00000260404 NESP48681 1621 aa14.1□□□□□ -0.15
PAK6-201ENST00000260404 UNC13AQ9UPW8 1703 aa14.08□□□□□ -0.16
PAK6-201ENST00000260404 MIER1Q8N108 512 aa14.08□□□□□ -0.16
PAK6-201ENST00000260404 RRP7BPQ9NSQ0 103 aa14.06□□□□□ -0.16
PAK6-201ENST00000260404 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
PAK6-201ENST00000260404 RAD54L2Q9Y4B4 1467 aa14.04□□□□□ -0.16
PAK6-201ENST00000260404 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
PAK6-201ENST00000260404 MTUS2Q5JR59 1369 aa14.03□□□□□ -0.16
PAK6-201ENST00000260404 SYNJ1O43426 1573 aa14.02□□□□□ -0.17
PAK6-201ENST00000260404 FANCD2Q9BXW9 1451 aa14.01□□□□□ -0.17
PAK6-201ENST00000260404 KCNH8Q96L42 1107 aa13.98□□□□□ -0.17
PAK6-201ENST00000260404 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms