RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 DCAF8L2P0C7V8 631 aa15.51■□□□□ 0.07
PTPRT-206ENST00000373198 PELP1Q8IZL8 1130 aaKnown RBP14.68□□□□□ -0.06
PTPRT-206ENST00000373198 EHMT2Q96KQ7 1210 aa14.65□□□□□ -0.06
PTPRT-206ENST00000373198 SUPT5HO00267 1087 aaKnown RBP14.38□□□□□ -0.11
PTPRT-206ENST00000373198 ERICH6Q7L0X2 663 aa14.3□□□□□ -0.12
PTPRT-206ENST00000373198 APLP2Q06481 763 aa14.19□□□□□ -0.14
PTPRT-206ENST00000373198 TTBK1Q5TCY1 1321 aaPredicted RBP14.15□□□□□ -0.14
PTPRT-206ENST00000373198 FAM9AQ8IZU1 332 aaPredicted RBP14.09□□□□□ -0.15
PTPRT-206ENST00000373198 MYT1Q01538 1121 aa14.06□□□□□ -0.16
PTPRT-206ENST00000373198 SHROOM4Q9ULL8 1493 aa14.02□□□□□ -0.16
PTPRT-206ENST00000373198 CCER1Q8TC90 406 aaPredicted RBP14.02□□□□□ -0.17
PTPRT-206ENST00000373198 RANGAP1P46060 587 aaPredicted RBP13.94□□□□□ -0.18
PTPRT-206ENST00000373198 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
PTPRT-206ENST00000373198 PCGF6Q9BYE7 350 aa13.79□□□□□ -0.2
PTPRT-206ENST00000373198 CENPBP07199 599 aaPredicted RBP13.73□□□□□ -0.21
PTPRT-206ENST00000373198 NEFLP07196 543 aa13.71□□□□□ -0.22
PTPRT-206ENST00000373198 YTHDC1Q96MU7 727 aaKnown RBP13.65□□□□□ -0.22
PTPRT-206ENST00000373198 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
PTPRT-206ENST00000373198 MYT1LQ9UL68 1186 aa13.57□□□□□ -0.24
PTPRT-206ENST00000373198 CHIC1Q5VXU3 224 aa13.55□□□□□ -0.24
PTPRT-206ENST00000373198 POLR3GLQ9BT43 218 aa13.52□□□□□ -0.25
PTPRT-206ENST00000373198 CNGB1Q14028 1251 aaPredicted RBP13.44□□□□□ -0.26
PTPRT-206ENST00000373198 SLC4A1APQ9BWU0 796 aaKnown RBP13.43□□□□□ -0.26
PTPRT-206ENST00000373198 UBTFP17480 764 aaKnown RBP13.35□□□□□ -0.27
PTPRT-206ENST00000373198 ZNF316A6NFI3 1004 aaPredicted RBP13.28□□□□□ -0.28
PTPRT-206ENST00000373198 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
PTPRT-206ENST00000373198 HNRNPUL2Q1KMD3 747 aaKnown RBP13.26□□□□□ -0.29
PTPRT-206ENST00000373198 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
PTPRT-206ENST00000373198 CLSPNQ9HAW4 1339 aa13.24□□□□□ -0.29
PTPRT-206ENST00000373198 PPARGC1BQ86YN6 1023 aaKnown RBP13.23□□□□□ -0.29
PTPRT-206ENST00000373198 ITGAEP38570 1179 aa13.19□□□□□ -0.3
PTPRT-206ENST00000373198 TRIM41Q8WV44 630 aa13.16□□□□□ -0.3
PTPRT-206ENST00000373198 RTL5Q5HYW3 569 aaPredicted RBP13.14□□□□□ -0.31
PTPRT-206ENST00000373198 BCL11AQ9H165 835 aa13.14□□□□□ -0.31
PTPRT-206ENST00000373198 SLC24A1O60721 1099 aa13.11□□□□□ -0.31
PTPRT-206ENST00000373198 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
PTPRT-206ENST00000373198 NISCHQ9Y2I1 1504 aa12.89□□□□□ -0.35
PTPRT-206ENST00000373198 BCANQ96GW7 911 aa12.85□□□□□ -0.35
PTPRT-206ENST00000373198 CANXP27824 592 aaKnown RBP12.8□□□□□ -0.36
PTPRT-206ENST00000373198 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
PTPRT-206ENST00000373198 HRCP23327 699 aa12.77□□□□□ -0.37
PTPRT-206ENST00000373198 ZNF326Q5BKZ1 582 aaKnown RBP12.73□□□□□ -0.37
PTPRT-206ENST00000373198 TRIM52Q96A61 297 aa12.7□□□□□ -0.38
PTPRT-206ENST00000373198 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
PTPRT-206ENST00000373198 FAM50AQ14320 339 aaKnown RBP12.68□□□□□ -0.38
PTPRT-206ENST00000373198 NEFMP07197 916 aa12.65□□□□□ -0.38
PTPRT-206ENST00000373198 NEUROD1Q13562 356 aa12.65□□□□□ -0.39
PTPRT-206ENST00000373198 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
PTPRT-206ENST00000373198 HSP90AA1P07900 732 aaKnown RBP12.59□□□□□ -0.39
PTPRT-206ENST00000373198 NPM2Q86SE8 214 aaKnown RBP12.58□□□□□ -0.4
PTPRT-206ENST00000373198 CDK11AQ9UQ88 783 aaPredicted RBP12.58□□□□□ -0.4
PTPRT-206ENST00000373198 A0A0G2JS52 829 aa12.57□□□□□ -0.4
PTPRT-206ENST00000373198 ANP32BQ92688 251 aaKnown RBP12.57□□□□□ -0.4
PTPRT-206ENST00000373198 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
PTPRT-206ENST00000373198 GTF3C3Q9Y5Q9 886 aa12.54□□□□□ -0.4
PTPRT-206ENST00000373198 CDK11BP21127 795 aaKnown RBP12.53□□□□□ -0.4
PTPRT-206ENST00000373198 GLIPR1L2Q4G1C9 344 aa12.49□□□□□ -0.41
PTPRT-206ENST00000373198 ANP32CO43423 234 aa12.49□□□□□ -0.41
PTPRT-206ENST00000373198 FBLN2P98095 1184 aa12.49□□□□□ -0.41
PTPRT-206ENST00000373198 SCAF1Q9H7N4 1312 aaKnown RBP12.48□□□□□ -0.41
PTPRT-206ENST00000373198 TULP1O00294 542 aaPredicted RBP12.48□□□□□ -0.41
PTPRT-206ENST00000373198 ARXQ96QS3 562 aa12.48□□□□□ -0.41
PTPRT-206ENST00000373198 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.41
PTPRT-206ENST00000373198 ESF1Q9H501 851 aaKnown RBP12.44□□□□□ -0.42
PTPRT-206ENST00000373198 LOC105371045A0A1W2PR82 267 aa12.41□□□□□ -0.42
PTPRT-206ENST00000373198 PLEKHG5O94827 1062 aa12.41□□□□□ -0.42
PTPRT-206ENST00000373198 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
PTPRT-206ENST00000373198 ARID3CA6NKF2 412 aa12.39□□□□□ -0.43
PTPRT-206ENST00000373198 NCBP3Q53F19 620 aaKnown RBP12.37□□□□□ -0.43
PTPRT-206ENST00000373198 NBR1Q14596 966 aa12.36□□□□□ -0.43
PTPRT-206ENST00000373198 CHGAP10645 457 aaKnown RBP12.34□□□□□ -0.43
PTPRT-206ENST00000373198 UPF2Q9HAU5 1272 aaKnown RBP12.32□□□□□ -0.44
PTPRT-206ENST00000373198 ZBTB7CA1YPR0 619 aa12.29□□□□□ -0.44
PTPRT-206ENST00000373198 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
PTPRT-206ENST00000373198 SALL2Q9Y467 1007 aaPredicted RBP12.25□□□□□ -0.45
PTPRT-206ENST00000373198 SENP3Q9H4L4 574 aaPredicted RBP12.25□□□□□ -0.45
PTPRT-206ENST00000373198 TPRNQ4KMQ1 711 aa12.23□□□□□ -0.45
PTPRT-206ENST00000373198 C14orf37Q86TY3 774 aa12.2□□□□□ -0.46
PTPRT-206ENST00000373198 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
PTPRT-206ENST00000373198 P3H3Q8IVL6 736 aa12.17□□□□□ -0.46
PTPRT-206ENST00000373198 AMER1Q5JTC6 1135 aaPredicted RBP12.14□□□□□ -0.47
PTPRT-206ENST00000373198 MYH16Q9H6N6 1097 aa12.14□□□□□ -0.47
PTPRT-206ENST00000373198 FKBP8Q14318 412 aa12.12□□□□□ -0.47
PTPRT-206ENST00000373198 NPHP1O15259 732 aa12.12□□□□□ -0.47
PTPRT-206ENST00000373198 CLSTN1O94985 981 aa12.11□□□□□ -0.47
PTPRT-206ENST00000373198 ACIN1Q9UKV3 1341 aaKnown RBP12.11□□□□□ -0.47
PTPRT-206ENST00000373198 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.11□□□□□ -0.47
PTPRT-206ENST00000373198 HAP1P54257 671 aaPredicted RBP12.1□□□□□ -0.47
PTPRT-206ENST00000373198 FAM9BQ8IZU0 186 aa12.1□□□□□ -0.47
PTPRT-206ENST00000373198 TNNT2P45379 298 aaPredicted RBP12.08□□□□□ -0.48
PTPRT-206ENST00000373198 ZRSR1Q15695 479 aaKnown RBP12.08□□□□□ -0.48
PTPRT-206ENST00000373198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTPRT-206ENST00000373198 NCLP19338 710 aaKnown RBP12.07□□□□□ -0.48
PTPRT-206ENST00000373198 PABPN1Q86U42 306 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTPRT-206ENST00000373198 PTMAP06454 111 aaKnown RBP12.05□□□□□ -0.48
PTPRT-206ENST00000373198 CCDC136Q96JN2 1154 aa12.03□□□□□ -0.48
PTPRT-206ENST00000373198 WDR43Q15061 677 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPRT-206ENST00000373198 HNRNPUQ00839 825 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTPRT-206ENST00000373198 PRM3Q9NNZ6 103 aa12.03□□□□□ -0.48
PTPRT-206ENST00000373198 DNTTIP2Q5QJE6 756 aaKnown RBP12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms