RNA–Protein interactions for RNA: ENST00000513846.1

GAPDHP60-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase pseudogene 60, humanhuman

BASIC

Gene GAPDHP60, Length 995 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP60-201ENST00000513846 NISCHQ9Y2I1 1504 aa24.03■■□□□ 1.44
GAPDHP60-201ENST00000513846 CCDC180Q9P1Z9 1646 aa21.47■■□□□ 1.03
GAPDHP60-201ENST00000513846 ABCC9O60706 1549 aa21.16■□□□□ 0.98
GAPDHP60-201ENST00000513846 RB1CC1Q8TDY2 1594 aa20.21■□□□□ 0.83
GAPDHP60-201ENST00000513846 NACADO15069 1562 aa20.13■□□□□ 0.81
GAPDHP60-201ENST00000513846 ZCCHC6Q5VYS8 1495 aaKnown RBP20.02■□□□□ 0.8
GAPDHP60-201ENST00000513846 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
GAPDHP60-201ENST00000513846 UNC13AQ9UPW8 1703 aa20■□□□□ 0.79
GAPDHP60-201ENST00000513846 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
GAPDHP60-201ENST00000513846 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
GAPDHP60-201ENST00000513846 BICRAQ9NZM4 1560 aa19.76■□□□□ 0.75
GAPDHP60-201ENST00000513846 PABPN1Q86U42 306 aaKnown RBP eCLIP19.7■□□□□ 0.74
GAPDHP60-201ENST00000513846 SCRIBQ14160 1630 aa19.65■□□□□ 0.74
GAPDHP60-201ENST00000513846 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
GAPDHP60-201ENST00000513846 SHROOM4Q9ULL8 1493 aa19.32■□□□□ 0.68
GAPDHP60-201ENST00000513846 EIF4G1Q04637 1599 aaKnown RBP19.18■□□□□ 0.66
GAPDHP60-201ENST00000513846 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
GAPDHP60-201ENST00000513846 CECR2Q9BXF3 1484 aa18.97■□□□□ 0.63
GAPDHP60-201ENST00000513846 SMARCA4P51532 1647 aa18.74■□□□□ 0.59
GAPDHP60-201ENST00000513846 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
GAPDHP60-201ENST00000513846 BAZ1AQ9NRL2 1556 aaPredicted RBP18.6■□□□□ 0.57
GAPDHP60-201ENST00000513846 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
GAPDHP60-201ENST00000513846 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
GAPDHP60-201ENST00000513846 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
GAPDHP60-201ENST00000513846 HMGXB3Q12766 1538 aa18.52■□□□□ 0.56
GAPDHP60-201ENST00000513846 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
GAPDHP60-201ENST00000513846 WIZO95785 1651 aa18.43■□□□□ 0.54
GAPDHP60-201ENST00000513846 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
GAPDHP60-201ENST00000513846 NESP48681 1621 aa18.32■□□□□ 0.52
GAPDHP60-201ENST00000513846 RSF1Q96T23 1441 aaPredicted RBP18.24■□□□□ 0.51
GAPDHP60-201ENST00000513846 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
GAPDHP60-201ENST00000513846 ERCC6Q03468 1493 aa18.16■□□□□ 0.5
GAPDHP60-201ENST00000513846 LAMC3Q9Y6N6 1575 aa18.14■□□□□ 0.49
GAPDHP60-201ENST00000513846 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
GAPDHP60-201ENST00000513846 THOC2Q8NI27 1593 aaKnown RBP18.1■□□□□ 0.49
GAPDHP60-201ENST00000513846 CUX2O14529 1486 aa18.01■□□□□ 0.47
GAPDHP60-201ENST00000513846 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
GAPDHP60-201ENST00000513846 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
GAPDHP60-201ENST00000513846 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
GAPDHP60-201ENST00000513846 CCDC88BA6NC98 1476 aa17.9■□□□□ 0.46
GAPDHP60-201ENST00000513846 CFTRP13569 1480 aa17.9■□□□□ 0.46
GAPDHP60-201ENST00000513846 FANCD2Q9BXW9 1451 aa17.85■□□□□ 0.45
GAPDHP60-201ENST00000513846 MRC2Q9UBG0 1479 aa17.85■□□□□ 0.45
GAPDHP60-201ENST00000513846 WDR62O43379 1518 aa17.84■□□□□ 0.45
GAPDHP60-201ENST00000513846 CEP164Q9UPV0 1460 aa17.84■□□□□ 0.45
GAPDHP60-201ENST00000513846 URB2Q14146 1524 aaKnown RBP17.76■□□□□ 0.43
GAPDHP60-201ENST00000513846 SUPT5HO00267 1087 aaKnown RBP17.61■□□□□ 0.41
GAPDHP60-201ENST00000513846 DNAJC5Q9H3Z4 198 aa17.6■□□□□ 0.41
GAPDHP60-201ENST00000513846 TOPBP1Q92547 1522 aa17.58■□□□□ 0.41
GAPDHP60-201ENST00000513846 DNMBPQ6XZF7 1577 aa17.55■□□□□ 0.4
GAPDHP60-201ENST00000513846 ZNF608Q9ULD9 1512 aaPredicted RBP17.5■□□□□ 0.39
GAPDHP60-201ENST00000513846 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
GAPDHP60-201ENST00000513846 CUX1P39880 1505 aa17.45■□□□□ 0.38
GAPDHP60-201ENST00000513846 EIF4G3O43432 1585 aaKnown RBP17.45■□□□□ 0.38
GAPDHP60-201ENST00000513846 IFT140Q96RY7 1462 aa17.44■□□□□ 0.38
GAPDHP60-201ENST00000513846 POLA1P09884 1462 aaPredicted RBP17.43■□□□□ 0.38
GAPDHP60-201ENST00000513846 ABCC8Q09428 1581 aa17.41■□□□□ 0.38
GAPDHP60-201ENST00000513846 RAD54L2Q9Y4B4 1467 aa17.38■□□□□ 0.37
GAPDHP60-201ENST00000513846 FGD5Q6ZNL6 1462 aa17.37■□□□□ 0.37
GAPDHP60-201ENST00000513846 WDR97A6NE52 1622 aa17.35■□□□□ 0.37
GAPDHP60-201ENST00000513846 AQRO60306 1485 aaKnown RBP eCLIP17.32■□□□□ 0.36
GAPDHP60-201ENST00000513846 CHD1O14646 1710 aa17.3■□□□□ 0.36
GAPDHP60-201ENST00000513846 SYNJ1O43426 1573 aa17.28■□□□□ 0.36
GAPDHP60-201ENST00000513846 SOGA1O94964 1423 aa17.27■□□□□ 0.35
GAPDHP60-201ENST00000513846 BIVM-ERCC5R4GMW8 1640 aa17.26■□□□□ 0.35
GAPDHP60-201ENST00000513846 TDRD9Q8NDG6 1382 aaKnown RBP17.23■□□□□ 0.35
GAPDHP60-201ENST00000513846 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
GAPDHP60-201ENST00000513846 TOP2BQ02880 1626 aa17.21■□□□□ 0.35
GAPDHP60-201ENST00000513846 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
GAPDHP60-201ENST00000513846 SNAPC4Q5SXM2 1469 aa17.18■□□□□ 0.34
GAPDHP60-201ENST00000513846 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
GAPDHP60-201ENST00000513846 ABCA10Q8WWZ4 1543 aa17.15■□□□□ 0.34
GAPDHP60-201ENST00000513846 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
GAPDHP60-201ENST00000513846 RIMBP3CA6NJZ7 1639 aa17.13■□□□□ 0.33
GAPDHP60-201ENST00000513846 RIMBP3BA6NNM3 1639 aa17.13■□□□□ 0.33
GAPDHP60-201ENST00000513846 RIMBP3Q9UFD9 1639 aa17.13■□□□□ 0.33
GAPDHP60-201ENST00000513846 GRIN2BQ13224 1484 aa17.1■□□□□ 0.33
GAPDHP60-201ENST00000513846 GAPVD1Q14C86 1478 aa17.09■□□□□ 0.33
GAPDHP60-201ENST00000513846 MAGI1Q96QZ7 1491 aaPredicted RBP17.06■□□□□ 0.32
GAPDHP60-201ENST00000513846 ARHGEF11O15085 1522 aa17.05■□□□□ 0.32
GAPDHP60-201ENST00000513846 ADAMTS12P58397 1594 aa17.04■□□□□ 0.32
GAPDHP60-201ENST00000513846 FBLN2P98095 1184 aa17.04■□□□□ 0.32
GAPDHP60-201ENST00000513846 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
GAPDHP60-201ENST00000513846 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
GAPDHP60-201ENST00000513846 TRIM41Q8WV44 630 aa17.01■□□□□ 0.31
GAPDHP60-201ENST00000513846 CEP170Q5SW79 1584 aa16.94■□□□□ 0.3
GAPDHP60-201ENST00000513846 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
GAPDHP60-201ENST00000513846 ERICH3Q5RHP9 1530 aa16.92■□□□□ 0.3
GAPDHP60-201ENST00000513846 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
GAPDHP60-201ENST00000513846 GRIN2AQ12879 1464 aa16.92■□□□□ 0.3
GAPDHP60-201ENST00000513846 ERCC6L2Q5T890 1561 aa16.88■□□□□ 0.29
GAPDHP60-201ENST00000513846 FHAD1B1AJZ9 1412 aa16.86■□□□□ 0.29
GAPDHP60-201ENST00000513846 NUP160Q12769 1436 aa16.84■□□□□ 0.29
GAPDHP60-201ENST00000513846 SHROOM2Q13796 1616 aa16.81■□□□□ 0.28
GAPDHP60-201ENST00000513846 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
GAPDHP60-201ENST00000513846 CUL7Q14999 1698 aa16.78■□□□□ 0.28
GAPDHP60-201ENST00000513846 CYB5RLQ6IPT4 315 aa16.78■□□□□ 0.28
GAPDHP60-201ENST00000513846 KIF27Q86VH2 1401 aa16.76■□□□□ 0.27
GAPDHP60-201ENST00000513846 IGF1RP08069 1367 aa16.75■□□□□ 0.27
GAPDHP60-201ENST00000513846 CARMIL1Q5VZK9 1371 aa16.63■□□□□ 0.25
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