RNA–Protein interactions for RNA: ENST00000477737.5

VWA3B-213, Transcript of von Willebrand factor A domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VWA3B, Length 4,454 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-213ENST00000477737 NISCHQ9Y2I1 1504 aa21.62■■□□□ 1.05
VWA3B-213ENST00000477737 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
VWA3B-213ENST00000477737 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
VWA3B-213ENST00000477737 ABCC9O60706 1549 aa18.72■□□□□ 0.59
VWA3B-213ENST00000477737 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
VWA3B-213ENST00000477737 NACADO15069 1562 aa18.14■□□□□ 0.49
VWA3B-213ENST00000477737 ZCCHC6Q5VYS8 1495 aaKnown RBP17.97■□□□□ 0.47
VWA3B-213ENST00000477737 MYO15BQ96JP2 1530 aa17.97■□□□□ 0.47
VWA3B-213ENST00000477737 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
VWA3B-213ENST00000477737 PABPN1Q86U42 306 aaKnown RBP eCLIP17.62■□□□□ 0.41
VWA3B-213ENST00000477737 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
VWA3B-213ENST00000477737 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
VWA3B-213ENST00000477737 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
VWA3B-213ENST00000477737 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
VWA3B-213ENST00000477737 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
VWA3B-213ENST00000477737 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
VWA3B-213ENST00000477737 EIF4G1Q04637 1599 aaKnown RBP16.87■□□□□ 0.29
VWA3B-213ENST00000477737 SMARCA2P51531 1590 aa16.86■□□□□ 0.29
VWA3B-213ENST00000477737 SUPT5HO00267 1087 aaKnown RBP16.79■□□□□ 0.28
VWA3B-213ENST00000477737 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
VWA3B-213ENST00000477737 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
VWA3B-213ENST00000477737 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
VWA3B-213ENST00000477737 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
VWA3B-213ENST00000477737 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
VWA3B-213ENST00000477737 DNAJC5BQ9UF47 199 aa16.63■□□□□ 0.25
VWA3B-213ENST00000477737 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
VWA3B-213ENST00000477737 RSF1Q96T23 1441 aaPredicted RBP16.54■□□□□ 0.24
VWA3B-213ENST00000477737 MROH2BQ7Z745 1585 aa16.52■□□□□ 0.24
VWA3B-213ENST00000477737 ERCC6Q03468 1493 aa16.51■□□□□ 0.23
VWA3B-213ENST00000477737 PDS5BQ9NTI5 1447 aa16.47■□□□□ 0.23
VWA3B-213ENST00000477737 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
VWA3B-213ENST00000477737 TOP2AP11388 1531 aaKnown RBP16.39■□□□□ 0.21
VWA3B-213ENST00000477737 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
VWA3B-213ENST00000477737 WIZO95785 1651 aa16.27■□□□□ 0.2
VWA3B-213ENST00000477737 LAMC3Q9Y6N6 1575 aa16.23■□□□□ 0.19
VWA3B-213ENST00000477737 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
VWA3B-213ENST00000477737 ABCC8Q09428 1581 aa16.15■□□□□ 0.18
VWA3B-213ENST00000477737 CCDC88BA6NC98 1476 aa16.14■□□□□ 0.17
VWA3B-213ENST00000477737 FAM9AQ8IZU1 332 aaPredicted RBP16.13■□□□□ 0.17
VWA3B-213ENST00000477737 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
VWA3B-213ENST00000477737 CFTRP13569 1480 aa16.09■□□□□ 0.17
VWA3B-213ENST00000477737 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
VWA3B-213ENST00000477737 CUX2O14529 1486 aa16.04■□□□□ 0.16
VWA3B-213ENST00000477737 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
VWA3B-213ENST00000477737 NESP48681 1621 aa15.99■□□□□ 0.15
VWA3B-213ENST00000477737 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
VWA3B-213ENST00000477737 FBLN2P98095 1184 aa15.84■□□□□ 0.13
VWA3B-213ENST00000477737 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
VWA3B-213ENST00000477737 SOGA1O94964 1423 aa15.81■□□□□ 0.12
VWA3B-213ENST00000477737 CHMP7Q8WUX9 453 aaPredicted RBP15.8■□□□□ 0.12
VWA3B-213ENST00000477737 DNMBPQ6XZF7 1577 aa15.78■□□□□ 0.12
VWA3B-213ENST00000477737 TOPBP1Q92547 1522 aa15.74■□□□□ 0.11
VWA3B-213ENST00000477737 WDR62O43379 1518 aa15.73■□□□□ 0.11
VWA3B-213ENST00000477737 KIF27Q86VH2 1401 aa15.7■□□□□ 0.1
VWA3B-213ENST00000477737 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
VWA3B-213ENST00000477737 PRDM2Q13029 1718 aa15.69■□□□□ 0.1
VWA3B-213ENST00000477737 KIF21AQ7Z4S6 1674 aa15.68■□□□□ 0.1
VWA3B-213ENST00000477737 FGD5Q6ZNL6 1462 aa15.65■□□□□ 0.1
VWA3B-213ENST00000477737 URB2Q14146 1524 aaKnown RBP15.65■□□□□ 0.1
VWA3B-213ENST00000477737 THOC2Q8NI27 1593 aaKnown RBP15.6■□□□□ 0.09
VWA3B-213ENST00000477737 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
VWA3B-213ENST00000477737 EEA1Q15075 1411 aa15.6■□□□□ 0.09
VWA3B-213ENST00000477737 GRIN2BQ13224 1484 aa15.59■□□□□ 0.09
VWA3B-213ENST00000477737 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
VWA3B-213ENST00000477737 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
VWA3B-213ENST00000477737 WDR97A6NE52 1622 aa15.56■□□□□ 0.08
VWA3B-213ENST00000477737 UBTFP17480 764 aaKnown RBP15.53■□□□□ 0.08
VWA3B-213ENST00000477737 CUX1P39880 1505 aa15.52■□□□□ 0.07
VWA3B-213ENST00000477737 TOP2BQ02880 1626 aa15.51■□□□□ 0.07
VWA3B-213ENST00000477737 NPM1P06748 294 aaKnown RBP eCLIP15.51■□□□□ 0.07
VWA3B-213ENST00000477737 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
VWA3B-213ENST00000477737 CSRNP3Q8WYN3 585 aa15.5■□□□□ 0.07
VWA3B-213ENST00000477737 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
VWA3B-213ENST00000477737 MAGI1Q96QZ7 1491 aaPredicted RBP15.5■□□□□ 0.07
VWA3B-213ENST00000477737 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
VWA3B-213ENST00000477737 AQRO60306 1485 aaKnown RBP eCLIP15.48■□□□□ 0.07
VWA3B-213ENST00000477737 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
VWA3B-213ENST00000477737 CARMIL1Q5VZK9 1371 aa15.44■□□□□ 0.06
VWA3B-213ENST00000477737 BIVM-ERCC5R4GMW8 1640 aa15.4■□□□□ 0.06
VWA3B-213ENST00000477737 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
VWA3B-213ENST00000477737 SNAPC4Q5SXM2 1469 aa15.4■□□□□ 0.06
VWA3B-213ENST00000477737 CARMIL2Q6F5E8 1435 aa15.39■□□□□ 0.05
VWA3B-213ENST00000477737 APLP2Q06481 763 aa15.37■□□□□ 0.05
VWA3B-213ENST00000477737 ERICH3Q5RHP9 1530 aa15.37■□□□□ 0.05
VWA3B-213ENST00000477737 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
VWA3B-213ENST00000477737 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
VWA3B-213ENST00000477737 DNAJC5Q9H3Z4 198 aa15.34■□□□□ 0.05
VWA3B-213ENST00000477737 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
VWA3B-213ENST00000477737 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
VWA3B-213ENST00000477737 TTBK1Q5TCY1 1321 aaPredicted RBP15.3■□□□□ 0.04
VWA3B-213ENST00000477737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.29■□□□□ 0.04
VWA3B-213ENST00000477737 HNRNPUL2Q1KMD3 747 aaKnown RBP15.29■□□□□ 0.04
VWA3B-213ENST00000477737 EHMT2Q96KQ7 1210 aa15.29■□□□□ 0.04
VWA3B-213ENST00000477737 IGF1RP08069 1367 aa15.28■□□□□ 0.04
VWA3B-213ENST00000477737 RANGAP1P46060 587 aaPredicted RBP15.28■□□□□ 0.04
VWA3B-213ENST00000477737 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.04
VWA3B-213ENST00000477737 JPH4Q96JJ6 628 aa15.27■□□□□ 0.04
VWA3B-213ENST00000477737 ATP1B4Q9UN42 357 aaPredicted RBP15.27■□□□□ 0.03
VWA3B-213ENST00000477737 CUL7Q14999 1698 aa15.26■□□□□ 0.03
VWA3B-213ENST00000477737 GOLGA3Q08378 1498 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms