RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 PELP1Q8IZL8 1130 aaKnown RBP15.34■□□□□ 0.05
TRPM1-202ENST00000397795 MYT1Q01538 1121 aa15.3■□□□□ 0.04
TRPM1-202ENST00000397795 ERICH6Q7L0X2 663 aa14.66□□□□□ -0.06
TRPM1-202ENST00000397795 CCER1Q8TC90 406 aaPredicted RBP14.56□□□□□ -0.08
TRPM1-202ENST00000397795 TTBK1Q5TCY1 1321 aaPredicted RBP14.42□□□□□ -0.1
TRPM1-202ENST00000397795 HRCP23327 699 aa14.36□□□□□ -0.11
TRPM1-202ENST00000397795 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
TRPM1-202ENST00000397795 YTHDC1Q96MU7 727 aaKnown RBP14.21□□□□□ -0.13
TRPM1-202ENST00000397795 PCGF6Q9BYE7 350 aa14.17□□□□□ -0.14
TRPM1-202ENST00000397795 ZEB1P37275 1124 aaPredicted RBP14.02□□□□□ -0.17
TRPM1-202ENST00000397795 NISCHQ9Y2I1 1504 aa13.92□□□□□ -0.18
TRPM1-202ENST00000397795 SUPT5HO00267 1087 aaKnown RBP13.87□□□□□ -0.19
TRPM1-202ENST00000397795 PPARGC1BQ86YN6 1023 aaKnown RBP13.86□□□□□ -0.19
TRPM1-202ENST00000397795 NEFLP07196 543 aa13.84□□□□□ -0.19
TRPM1-202ENST00000397795 DAXXQ9UER7 740 aaPredicted RBP13.67□□□□□ -0.22
TRPM1-202ENST00000397795 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
TRPM1-202ENST00000397795 RTL5Q5HYW3 569 aaPredicted RBP13.59□□□□□ -0.23
TRPM1-202ENST00000397795 TRIM26Q12899 539 aaPredicted RBP13.58□□□□□ -0.24
TRPM1-202ENST00000397795 GTF3C3Q9Y5Q9 886 aa13.53□□□□□ -0.24
TRPM1-202ENST00000397795 ACIN1Q9UKV3 1341 aaKnown RBP13.52□□□□□ -0.25
TRPM1-202ENST00000397795 DCAF8L2P0C7V8 631 aa13.48□□□□□ -0.25
TRPM1-202ENST00000397795 GLIPR1L2Q4G1C9 344 aa13.48□□□□□ -0.25
TRPM1-202ENST00000397795 APLP2Q06481 763 aa13.46□□□□□ -0.26
TRPM1-202ENST00000397795 SHROOM4Q9ULL8 1493 aa13.42□□□□□ -0.26
TRPM1-202ENST00000397795 ZNF316A6NFI3 1004 aaPredicted RBP13.3□□□□□ -0.28
TRPM1-202ENST00000397795 DIEXFQ68CQ4 756 aaKnown RBP13.27□□□□□ -0.29
TRPM1-202ENST00000397795 NEUROD1Q13562 356 aa13.24□□□□□ -0.29
TRPM1-202ENST00000397795 BCL11AQ9H165 835 aa13.24□□□□□ -0.29
TRPM1-202ENST00000397795 CHIC1Q5VXU3 224 aa13.22□□□□□ -0.29
TRPM1-202ENST00000397795 EIF5BO60841 1220 aaKnown RBP13.2□□□□□ -0.3
TRPM1-202ENST00000397795 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
TRPM1-202ENST00000397795 ANP32EQ9BTT0 268 aa13.1□□□□□ -0.31
TRPM1-202ENST00000397795 RANGAP1P46060 587 aaPredicted RBP13.1□□□□□ -0.31
TRPM1-202ENST00000397795 LOC105371045A0A1W2PR82 267 aa13.04□□□□□ -0.32
TRPM1-202ENST00000397795 MYT1LQ9UL68 1186 aa13.04□□□□□ -0.32
TRPM1-202ENST00000397795 DCAF1Q9Y4B6 1507 aa13.04□□□□□ -0.32
TRPM1-202ENST00000397795 CLSPNQ9HAW4 1339 aa13.04□□□□□ -0.32
TRPM1-202ENST00000397795 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
TRPM1-202ENST00000397795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.91□□□□□ -0.34
TRPM1-202ENST00000397795 CDK11AQ9UQ88 783 aaPredicted RBP12.87□□□□□ -0.35
TRPM1-202ENST00000397795 ANP32BQ92688 251 aaKnown RBP12.84□□□□□ -0.35
TRPM1-202ENST00000397795 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
TRPM1-202ENST00000397795 PRKCSHP14314 528 aaPredicted RBP12.83□□□□□ -0.36
TRPM1-202ENST00000397795 TNNT2P45379 298 aaPredicted RBP12.81□□□□□ -0.36
TRPM1-202ENST00000397795 CCDC180Q9P1Z9 1646 aa12.76□□□□□ -0.37
TRPM1-202ENST00000397795 ANP32AP39687 249 aaKnown RBP12.76□□□□□ -0.37
TRPM1-202ENST00000397795 CSRNP3Q8WYN3 585 aa12.73□□□□□ -0.37
TRPM1-202ENST00000397795 BCANQ96GW7 911 aa12.72□□□□□ -0.37
TRPM1-202ENST00000397795 MYO15BQ96JP2 1530 aa12.68□□□□□ -0.38
TRPM1-202ENST00000397795 CDK11BP21127 795 aaKnown RBP12.67□□□□□ -0.38
TRPM1-202ENST00000397795 TRIM44Q96DX7 344 aaPredicted RBP12.6□□□□□ -0.39
TRPM1-202ENST00000397795 MIER1Q8N108 512 aa12.58□□□□□ -0.4
TRPM1-202ENST00000397795 NCLP19338 710 aaKnown RBP12.57□□□□□ -0.4
TRPM1-202ENST00000397795 SUPT16HQ9Y5B9 1047 aaKnown RBP12.57□□□□□ -0.4
TRPM1-202ENST00000397795 FKBP8Q14318 412 aa12.55□□□□□ -0.4
TRPM1-202ENST00000397795 TSHZ2Q9NRE2 1034 aa12.55□□□□□ -0.4
TRPM1-202ENST00000397795 ZBTB47Q9UFB7 747 aaPredicted RBP12.55□□□□□ -0.4
TRPM1-202ENST00000397795 POLR3GLQ9BT43 218 aa12.52□□□□□ -0.41
TRPM1-202ENST00000397795 ERICH6BQ5W0A0 696 aa12.45□□□□□ -0.42
TRPM1-202ENST00000397795 DEKP35659 375 aaKnown RBP12.44□□□□□ -0.42
TRPM1-202ENST00000397795 ATP1B4Q9UN42 357 aaPredicted RBP12.43□□□□□ -0.42
TRPM1-202ENST00000397795 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
TRPM1-202ENST00000397795 NPM2Q86SE8 214 aaKnown RBP12.42□□□□□ -0.42
TRPM1-202ENST00000397795 RBM19Q9Y4C8 960 aaKnown RBP12.42□□□□□ -0.42
TRPM1-202ENST00000397795 NBR1Q14596 966 aa12.4□□□□□ -0.42
TRPM1-202ENST00000397795 ZNF326Q5BKZ1 582 aaKnown RBP12.4□□□□□ -0.42
TRPM1-202ENST00000397795 HSP90AA1P07900 732 aaKnown RBP12.37□□□□□ -0.43
TRPM1-202ENST00000397795 UBTFP17480 764 aaKnown RBP12.36□□□□□ -0.43
TRPM1-202ENST00000397795 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
TRPM1-202ENST00000397795 CNGB1Q14028 1251 aaPredicted RBP12.32□□□□□ -0.44
TRPM1-202ENST00000397795 NAP1L5Q96NT1 182 aaPredicted RBP12.32□□□□□ -0.44
TRPM1-202ENST00000397795 ANP32CO43423 234 aa12.31□□□□□ -0.44
TRPM1-202ENST00000397795 CANXP27824 592 aaKnown RBP12.3□□□□□ -0.44
TRPM1-202ENST00000397795 ITGAEP38570 1179 aa12.3□□□□□ -0.44
TRPM1-202ENST00000397795 RTN4Q9NQC3 1192 aaKnown RBP12.27□□□□□ -0.45
TRPM1-202ENST00000397795 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
TRPM1-202ENST00000397795 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
TRPM1-202ENST00000397795 NEFMP07197 916 aa12.26□□□□□ -0.45
TRPM1-202ENST00000397795 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
TRPM1-202ENST00000397795 CALRP27797 417 aaKnown RBP12.24□□□□□ -0.45
TRPM1-202ENST00000397795 ARXQ96QS3 562 aa12.23□□□□□ -0.45
TRPM1-202ENST00000397795 NOP58Q9Y2X3 529 aaKnown RBP12.22□□□□□ -0.45
TRPM1-202ENST00000397795 CCDC136Q96JN2 1154 aa12.21□□□□□ -0.46
TRPM1-202ENST00000397795 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.21□□□□□ -0.46
TRPM1-202ENST00000397795 SLC4A1APQ9BWU0 796 aaKnown RBP12.2□□□□□ -0.46
TRPM1-202ENST00000397795 DNTTIP2Q5QJE6 756 aaKnown RBP12.17□□□□□ -0.46
TRPM1-202ENST00000397795 TNNT3P45378 269 aaPredicted RBP12.17□□□□□ -0.46
TRPM1-202ENST00000397795 DDRGK1Q96HY6 314 aa12.17□□□□□ -0.46
TRPM1-202ENST00000397795 PTMSP20962 102 aa12.17□□□□□ -0.46
TRPM1-202ENST00000397795 FANCIQ9NVI1 1328 aa12.16□□□□□ -0.46
TRPM1-202ENST00000397795 PTMAP06454 111 aaKnown RBP12.13□□□□□ -0.47
TRPM1-202ENST00000397795 UBE2Q2Q8WVN8 375 aa12.13□□□□□ -0.47
TRPM1-202ENST00000397795 TRIM52Q96A61 297 aa12.12□□□□□ -0.47
TRPM1-202ENST00000397795 PKNOX2Q96KN3 472 aa12.12□□□□□ -0.47
TRPM1-202ENST00000397795 PPM1GO15355 546 aaPredicted RBP12.11□□□□□ -0.47
TRPM1-202ENST00000397795 GOLGA6L22H0YM25 854 aa12.11□□□□□ -0.47
TRPM1-202ENST00000397795 SALL2Q9Y467 1007 aaPredicted RBP12.1□□□□□ -0.47
TRPM1-202ENST00000397795 BECN1Q14457 450 aa12.09□□□□□ -0.47
TRPM1-202ENST00000397795 HNRNPUQ00839 825 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRPM1-202ENST00000397795 PPP4R2Q9NY27 417 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms