RNA–Protein interactions for RNA: ENST00000427149.5

SDHAP1-203, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 5 BASIC

Gene SDHAP1, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-203ENST00000427149 NISCHQ9Y2I1 1504 aa24.12■■□□□ 1.45
SDHAP1-203ENST00000427149 CCDC180Q9P1Z9 1646 aa21.59■■□□□ 1.05
SDHAP1-203ENST00000427149 ABCC9O60706 1549 aa21.44■■□□□ 1.02
SDHAP1-203ENST00000427149 RB1CC1Q8TDY2 1594 aa20.46■□□□□ 0.87
SDHAP1-203ENST00000427149 NACADO15069 1562 aa20.35■□□□□ 0.85
SDHAP1-203ENST00000427149 MYO15BQ96JP2 1530 aa20.14■□□□□ 0.81
SDHAP1-203ENST00000427149 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.81
SDHAP1-203ENST00000427149 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
SDHAP1-203ENST00000427149 UNC13AQ9UPW8 1703 aa20.03■□□□□ 0.8
SDHAP1-203ENST00000427149 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
SDHAP1-203ENST00000427149 DCAF1Q9Y4B6 1507 aa19.95■□□□□ 0.78
SDHAP1-203ENST00000427149 PABPN1Q86U42 306 aaKnown RBP eCLIP19.94■□□□□ 0.78
SDHAP1-203ENST00000427149 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
SDHAP1-203ENST00000427149 SCRIBQ14160 1630 aa19.69■□□□□ 0.74
SDHAP1-203ENST00000427149 SHROOM4Q9ULL8 1493 aa19.64■□□□□ 0.73
SDHAP1-203ENST00000427149 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
SDHAP1-203ENST00000427149 CC2D2AQ9P2K1 1620 aa19.39■□□□□ 0.69
SDHAP1-203ENST00000427149 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
SDHAP1-203ENST00000427149 SMARCA4P51532 1647 aa18.8■□□□□ 0.6
SDHAP1-203ENST00000427149 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
SDHAP1-203ENST00000427149 ATAD2BQ9ULI0 1458 aa18.77■□□□□ 0.59
SDHAP1-203ENST00000427149 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
SDHAP1-203ENST00000427149 BAZ1AQ9NRL2 1556 aaPredicted RBP18.7■□□□□ 0.58
SDHAP1-203ENST00000427149 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
SDHAP1-203ENST00000427149 PEG3Q9GZU2 1588 aa18.63■□□□□ 0.57
SDHAP1-203ENST00000427149 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
SDHAP1-203ENST00000427149 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.56
SDHAP1-203ENST00000427149 NESP48681 1621 aa18.48■□□□□ 0.55
SDHAP1-203ENST00000427149 ERCC6Q03468 1493 aa18.47■□□□□ 0.55
SDHAP1-203ENST00000427149 CUX2O14529 1486 aa18.42■□□□□ 0.54
SDHAP1-203ENST00000427149 WIZO95785 1651 aa18.37■□□□□ 0.53
SDHAP1-203ENST00000427149 LAMC3Q9Y6N6 1575 aa18.34■□□□□ 0.53
SDHAP1-203ENST00000427149 THOC2Q8NI27 1593 aaKnown RBP18.3■□□□□ 0.52
SDHAP1-203ENST00000427149 RSF1Q96T23 1441 aaPredicted RBP18.25■□□□□ 0.51
SDHAP1-203ENST00000427149 KIF21AQ7Z4S6 1674 aa18.25■□□□□ 0.51
SDHAP1-203ENST00000427149 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
SDHAP1-203ENST00000427149 PDS5BQ9NTI5 1447 aa18.2■□□□□ 0.5
SDHAP1-203ENST00000427149 DNAJC5Q9H3Z4 198 aa18.19■□□□□ 0.5
SDHAP1-203ENST00000427149 TOP2AP11388 1531 aaKnown RBP18.17■□□□□ 0.5
SDHAP1-203ENST00000427149 MRC2Q9UBG0 1479 aa18.08■□□□□ 0.49
SDHAP1-203ENST00000427149 CFTRP13569 1480 aa18.07■□□□□ 0.48
SDHAP1-203ENST00000427149 WDR62O43379 1518 aa18.06■□□□□ 0.48
SDHAP1-203ENST00000427149 CEP164Q9UPV0 1460 aa18.03■□□□□ 0.48
SDHAP1-203ENST00000427149 FANCD2Q9BXW9 1451 aa18.02■□□□□ 0.48
SDHAP1-203ENST00000427149 CCDC88BA6NC98 1476 aa17.93■□□□□ 0.46
SDHAP1-203ENST00000427149 URB2Q14146 1524 aaKnown RBP17.9■□□□□ 0.46
SDHAP1-203ENST00000427149 PRDM2Q13029 1718 aa17.89■□□□□ 0.46
SDHAP1-203ENST00000427149 TOPBP1Q92547 1522 aa17.71■□□□□ 0.43
SDHAP1-203ENST00000427149 IFT140Q96RY7 1462 aa17.66■□□□□ 0.42
SDHAP1-203ENST00000427149 DNMBPQ6XZF7 1577 aa17.66■□□□□ 0.42
SDHAP1-203ENST00000427149 ZNF608Q9ULD9 1512 aaPredicted RBP17.65■□□□□ 0.42
SDHAP1-203ENST00000427149 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
SDHAP1-203ENST00000427149 EIF4G3O43432 1585 aaKnown RBP17.57■□□□□ 0.4
SDHAP1-203ENST00000427149 TARBP1Q13395 1621 aaKnown RBP17.57■□□□□ 0.4
SDHAP1-203ENST00000427149 POLA1P09884 1462 aaPredicted RBP17.55■□□□□ 0.4
SDHAP1-203ENST00000427149 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
SDHAP1-203ENST00000427149 CUX1P39880 1505 aa17.47■□□□□ 0.39
SDHAP1-203ENST00000427149 AQRO60306 1485 aaKnown RBP eCLIP17.47■□□□□ 0.39
SDHAP1-203ENST00000427149 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
SDHAP1-203ENST00000427149 FGD5Q6ZNL6 1462 aa17.44■□□□□ 0.38
SDHAP1-203ENST00000427149 SUPT5HO00267 1087 aaKnown RBP17.44■□□□□ 0.38
SDHAP1-203ENST00000427149 TRIM41Q8WV44 630 aa17.43■□□□□ 0.38
SDHAP1-203ENST00000427149 SOGA1O94964 1423 aa17.4■□□□□ 0.38
SDHAP1-203ENST00000427149 CHD1O14646 1710 aa17.39■□□□□ 0.37
SDHAP1-203ENST00000427149 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
SDHAP1-203ENST00000427149 RIMBP3CA6NJZ7 1639 aa17.37■□□□□ 0.37
SDHAP1-203ENST00000427149 RIMBP3BA6NNM3 1639 aa17.37■□□□□ 0.37
SDHAP1-203ENST00000427149 RIMBP3Q9UFD9 1639 aa17.37■□□□□ 0.37
SDHAP1-203ENST00000427149 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
SDHAP1-203ENST00000427149 ARHGEF11O15085 1522 aa17.34■□□□□ 0.37
SDHAP1-203ENST00000427149 SNAPC4Q5SXM2 1469 aa17.32■□□□□ 0.36
SDHAP1-203ENST00000427149 GRIN2BQ13224 1484 aa17.27■□□□□ 0.36
SDHAP1-203ENST00000427149 MAGI1Q96QZ7 1491 aaPredicted RBP17.26■□□□□ 0.35
SDHAP1-203ENST00000427149 ABCA10Q8WWZ4 1543 aa17.26■□□□□ 0.35
SDHAP1-203ENST00000427149 ABCA5Q8WWZ7 1642 aa17.25■□□□□ 0.35
SDHAP1-203ENST00000427149 PBRM1Q86U86 1689 aa17.24■□□□□ 0.35
SDHAP1-203ENST00000427149 FBLN2P98095 1184 aa17.24■□□□□ 0.35
SDHAP1-203ENST00000427149 CLASP1Q7Z460 1538 aa17.23■□□□□ 0.35
SDHAP1-203ENST00000427149 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
SDHAP1-203ENST00000427149 GAPVD1Q14C86 1478 aa17.23■□□□□ 0.35
SDHAP1-203ENST00000427149 SYNJ1O43426 1573 aa17.23■□□□□ 0.35
SDHAP1-203ENST00000427149 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
SDHAP1-203ENST00000427149 SYNJ2O15056 1496 aa17.21■□□□□ 0.35
SDHAP1-203ENST00000427149 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
SDHAP1-203ENST00000427149 ARAP1Q96P48 1450 aa17.19■□□□□ 0.34
SDHAP1-203ENST00000427149 CHMP7Q8WUX9 453 aaPredicted RBP17.14■□□□□ 0.33
SDHAP1-203ENST00000427149 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
SDHAP1-203ENST00000427149 CYB5RLQ6IPT4 315 aa17.1■□□□□ 0.33
SDHAP1-203ENST00000427149 GRIN2AQ12879 1464 aa17.07■□□□□ 0.32
SDHAP1-203ENST00000427149 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
SDHAP1-203ENST00000427149 CEP170Q5SW79 1584 aa17.03■□□□□ 0.32
SDHAP1-203ENST00000427149 NUP160Q12769 1436 aa17.02■□□□□ 0.31
SDHAP1-203ENST00000427149 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
SDHAP1-203ENST00000427149 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
SDHAP1-203ENST00000427149 SHROOM2Q13796 1616 aa16.94■□□□□ 0.3
SDHAP1-203ENST00000427149 RUSC2Q8N2Y8 1516 aa16.88■□□□□ 0.29
SDHAP1-203ENST00000427149 TRHP20396 242 aaPredicted RBP16.83■□□□□ 0.28
SDHAP1-203ENST00000427149 KIF27Q86VH2 1401 aa16.83■□□□□ 0.28
SDHAP1-203ENST00000427149 IGF1RP08069 1367 aa16.82■□□□□ 0.28
SDHAP1-203ENST00000427149 CUL7Q14999 1698 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms