RNA–Protein interactions for RNA: ENST00000265968.7

CSRP3-201, Transcript of cysteine and glycine rich protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP3, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP3-201ENST00000265968 AEBP2Q6ZN18 517 aaPredicted RBP30.07■■■□□ 2.4
CSRP3-201ENST00000265968 CHIC1Q5VXU3 224 aa29.22■■■□□ 2.27
CSRP3-201ENST00000265968 PHF23Q9BUL5 403 aaPredicted RBP25.65■■□□□ 1.7
CSRP3-201ENST00000265968 SENP3Q9H4L4 574 aaPredicted RBP25.58■■□□□ 1.69
CSRP3-201ENST00000265968 FOXD1Q16676 465 aa23.73■■□□□ 1.39
CSRP3-201ENST00000265968 NISCHQ9Y2I1 1504 aa23.72■■□□□ 1.39
CSRP3-201ENST00000265968 PLPPR3Q6T4P5 718 aa23.65■■□□□ 1.38
CSRP3-201ENST00000265968 PPP6R1Q9UPN7 881 aa22.68■■□□□ 1.22
CSRP3-201ENST00000265968 ADRA2BP18089 450 aa22.63■■□□□ 1.21
CSRP3-201ENST00000265968 PIAS4Q8N2W9 510 aaPredicted RBP22.32■■□□□ 1.16
CSRP3-201ENST00000265968 MSH5O43196 834 aa21.99■■□□□ 1.11
CSRP3-201ENST00000265968 CCDC180Q9P1Z9 1646 aa21.22■□□□□ 0.99
CSRP3-201ENST00000265968 ABCC9O60706 1549 aa21.06■□□□□ 0.96
CSRP3-201ENST00000265968 PPP4R3CPQ6ZMV5 832 aa20.79■□□□□ 0.92
CSRP3-201ENST00000265968 SCAF1Q9H7N4 1312 aaKnown RBP20.75■□□□□ 0.91
CSRP3-201ENST00000265968 MAPK8IP2Q13387 824 aaPredicted RBP20.57■□□□□ 0.88
CSRP3-201ENST00000265968 DMRT2Q9Y5R5 561 aa20.39■□□□□ 0.85
CSRP3-201ENST00000265968 POTEDQ86YR6 584 aa20.31■□□□□ 0.84
CSRP3-201ENST00000265968 CNKSR2Q8WXI2 1034 aa20.27■□□□□ 0.84
CSRP3-201ENST00000265968 NCBP3Q53F19 620 aaKnown RBP20.21■□□□□ 0.83
CSRP3-201ENST00000265968 RB1CC1Q8TDY2 1594 aa20.1■□□□□ 0.81
CSRP3-201ENST00000265968 KCNA4P22459 653 aa20.09■□□□□ 0.81
CSRP3-201ENST00000265968 NACADO15069 1562 aa19.98■□□□□ 0.79
CSRP3-201ENST00000265968 DCAF8L2P0C7V8 631 aa19.98■□□□□ 0.79
CSRP3-201ENST00000265968 RNF216Q9NWF9 866 aaPredicted RBP19.94■□□□□ 0.78
CSRP3-201ENST00000265968 HOXD11P31277 338 aaPredicted RBP19.92■□□□□ 0.78
CSRP3-201ENST00000265968 NPM3O75607 178 aaKnown RBP19.9■□□□□ 0.78
CSRP3-201ENST00000265968 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
CSRP3-201ENST00000265968 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
CSRP3-201ENST00000265968 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
CSRP3-201ENST00000265968 PABPN1Q86U42 306 aaKnown RBP eCLIP19.62■□□□□ 0.73
CSRP3-201ENST00000265968 DCAF1Q9Y4B6 1507 aa19.57■□□□□ 0.72
CSRP3-201ENST00000265968 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
CSRP3-201ENST00000265968 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
CSRP3-201ENST00000265968 DCAF8L1A6NGE4 600 aa19.42■□□□□ 0.7
CSRP3-201ENST00000265968 SCRIBQ14160 1630 aa19.41■□□□□ 0.7
CSRP3-201ENST00000265968 SHROOM4Q9ULL8 1493 aa19.21■□□□□ 0.67
CSRP3-201ENST00000265968 SLC4A1APQ9BWU0 796 aaKnown RBP19.1■□□□□ 0.65
CSRP3-201ENST00000265968 EIF4G1Q04637 1599 aaKnown RBP19.02■□□□□ 0.64
CSRP3-201ENST00000265968 CC2D2AQ9P2K1 1620 aa19.02■□□□□ 0.64
CSRP3-201ENST00000265968 CECR2Q9BXF3 1484 aa18.92■□□□□ 0.62
CSRP3-201ENST00000265968 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.91■□□□□ 0.62
CSRP3-201ENST00000265968 SLC4A2P04920 1241 aa18.84■□□□□ 0.61
CSRP3-201ENST00000265968 RNF39Q9H2S5 420 aa18.82■□□□□ 0.6
CSRP3-201ENST00000265968 U3KPZ7 1027 aaPredicted RBP18.62■□□□□ 0.57
CSRP3-201ENST00000265968 C1QBPQ07021 282 aaKnown RBP18.59■□□□□ 0.57
CSRP3-201ENST00000265968 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
CSRP3-201ENST00000265968 SMARCA4P51532 1647 aa18.5■□□□□ 0.55
CSRP3-201ENST00000265968 ZBTB22O15209 634 aa18.49■□□□□ 0.55
CSRP3-201ENST00000265968 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
CSRP3-201ENST00000265968 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
CSRP3-201ENST00000265968 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
CSRP3-201ENST00000265968 CACNB1Q02641 598 aaPredicted RBP18.41■□□□□ 0.54
CSRP3-201ENST00000265968 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
CSRP3-201ENST00000265968 SMARCA2P51531 1590 aa18.39■□□□□ 0.53
CSRP3-201ENST00000265968 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
CSRP3-201ENST00000265968 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
CSRP3-201ENST00000265968 HMGXB3Q12766 1538 aa18.34■□□□□ 0.53
CSRP3-201ENST00000265968 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
CSRP3-201ENST00000265968 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
CSRP3-201ENST00000265968 BAZ1BQ9UIG0 1483 aaKnown RBP18.29■□□□□ 0.52
CSRP3-201ENST00000265968 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.51
CSRP3-201ENST00000265968 SAMD1Q6SPF0 538 aaPredicted RBP18.25■□□□□ 0.51
CSRP3-201ENST00000265968 CSRNP3Q8WYN3 585 aa18.23■□□□□ 0.51
CSRP3-201ENST00000265968 APLP2Q06481 763 aa18.21■□□□□ 0.51
CSRP3-201ENST00000265968 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
CSRP3-201ENST00000265968 NESP48681 1621 aa18.14■□□□□ 0.49
CSRP3-201ENST00000265968 WIZO95785 1651 aa18.12■□□□□ 0.49
CSRP3-201ENST00000265968 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
CSRP3-201ENST00000265968 CAPN15O75808 1086 aa18.04■□□□□ 0.48
CSRP3-201ENST00000265968 CUX2O14529 1486 aa18.02■□□□□ 0.47
CSRP3-201ENST00000265968 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
CSRP3-201ENST00000265968 ATXN8OSP0DMR3 200 aa17.98■□□□□ 0.47
CSRP3-201ENST00000265968 RSF1Q96T23 1441 aaPredicted RBP17.97■□□□□ 0.47
CSRP3-201ENST00000265968 ZNF219Q9P2Y4 722 aaPredicted RBP17.97■□□□□ 0.47
CSRP3-201ENST00000265968 KIF21AQ7Z4S6 1674 aa17.94■□□□□ 0.46
CSRP3-201ENST00000265968 THOC2Q8NI27 1593 aaKnown RBP17.92■□□□□ 0.46
CSRP3-201ENST00000265968 TRHP20396 242 aaPredicted RBP17.9■□□□□ 0.46
CSRP3-201ENST00000265968 ATF5Q9Y2D1 282 aaPredicted RBP17.89■□□□□ 0.45
CSRP3-201ENST00000265968 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
CSRP3-201ENST00000265968 PDS5BQ9NTI5 1447 aa17.88■□□□□ 0.45
CSRP3-201ENST00000265968 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
CSRP3-201ENST00000265968 DSG3P32926 999 aa17.83■□□□□ 0.44
CSRP3-201ENST00000265968 MRC2Q9UBG0 1479 aa17.75■□□□□ 0.43
CSRP3-201ENST00000265968 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
CSRP3-201ENST00000265968 CFTRP13569 1480 aa17.73■□□□□ 0.43
CSRP3-201ENST00000265968 FANCD2Q9BXW9 1451 aa17.73■□□□□ 0.43
CSRP3-201ENST00000265968 DNAJC5Q9H3Z4 198 aa17.72■□□□□ 0.43
CSRP3-201ENST00000265968 WDR62O43379 1518 aa17.7■□□□□ 0.42
CSRP3-201ENST00000265968 ABCB7O75027 752 aa17.67■□□□□ 0.42
CSRP3-201ENST00000265968 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
CSRP3-201ENST00000265968 PRDM2Q13029 1718 aa17.62■□□□□ 0.41
CSRP3-201ENST00000265968 POLA2Q14181 598 aa17.6■□□□□ 0.41
CSRP3-201ENST00000265968 URB2Q14146 1524 aaKnown RBP17.56■□□□□ 0.4
CSRP3-201ENST00000265968 TOPBP1Q92547 1522 aa17.41■□□□□ 0.38
CSRP3-201ENST00000265968 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
CSRP3-201ENST00000265968 DNMBPQ6XZF7 1577 aa17.37■□□□□ 0.37
CSRP3-201ENST00000265968 ZBTB12Q9Y330 459 aaPredicted RBP17.36■□□□□ 0.37
CSRP3-201ENST00000265968 IFT140Q96RY7 1462 aa17.35■□□□□ 0.37
CSRP3-201ENST00000265968 ABCC8Q09428 1581 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms