RNA–Protein interactions for RNA: ENST00000373193.7

PTPRT-205, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-205ENST00000373193 DCAF8L2P0C7V8 631 aa15.27■□□□□ 0.03
PTPRT-205ENST00000373193 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
PTPRT-205ENST00000373193 EHMT2Q96KQ7 1210 aa14.86□□□□□ -0.03
PTPRT-205ENST00000373193 ERICH6Q7L0X2 663 aa14.82□□□□□ -0.04
PTPRT-205ENST00000373193 SUPT5HO00267 1087 aaKnown RBP14.71□□□□□ -0.06
PTPRT-205ENST00000373193 MYT1Q01538 1121 aa14.63□□□□□ -0.07
PTPRT-205ENST00000373193 CCER1Q8TC90 406 aaPredicted RBP14.47□□□□□ -0.09
PTPRT-205ENST00000373193 TTBK1Q5TCY1 1321 aaPredicted RBP14.43□□□□□ -0.1
PTPRT-205ENST00000373193 CENPBP07199 599 aaPredicted RBP14.38□□□□□ -0.11
PTPRT-205ENST00000373193 PCGF6Q9BYE7 350 aa14.3□□□□□ -0.12
PTPRT-205ENST00000373193 YTHDC1Q96MU7 727 aaKnown RBP14.29□□□□□ -0.12
PTPRT-205ENST00000373193 SHROOM4Q9ULL8 1493 aa14.27□□□□□ -0.13
PTPRT-205ENST00000373193 APLP2Q06481 763 aa14.23□□□□□ -0.13
PTPRT-205ENST00000373193 NEFLP07196 543 aa14.15□□□□□ -0.14
PTPRT-205ENST00000373193 FAM9AQ8IZU1 332 aaPredicted RBP14.05□□□□□ -0.16
PTPRT-205ENST00000373193 RANGAP1P46060 587 aaPredicted RBP13.98□□□□□ -0.17
PTPRT-205ENST00000373193 DAXXQ9UER7 740 aaPredicted RBP13.95□□□□□ -0.18
PTPRT-205ENST00000373193 ZEB1P37275 1124 aaPredicted RBP13.89□□□□□ -0.19
PTPRT-205ENST00000373193 ATP1B4Q9UN42 357 aaPredicted RBP13.76□□□□□ -0.21
PTPRT-205ENST00000373193 RTL5Q5HYW3 569 aaPredicted RBP13.7□□□□□ -0.22
PTPRT-205ENST00000373193 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
PTPRT-205ENST00000373193 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
PTPRT-205ENST00000373193 CNGB1Q14028 1251 aaPredicted RBP13.63□□□□□ -0.23
PTPRT-205ENST00000373193 POLR3GLQ9BT43 218 aa13.62□□□□□ -0.23
PTPRT-205ENST00000373193 CLSPNQ9HAW4 1339 aa13.48□□□□□ -0.25
PTPRT-205ENST00000373193 HRCP23327 699 aa13.47□□□□□ -0.25
PTPRT-205ENST00000373193 UBTFP17480 764 aaKnown RBP13.46□□□□□ -0.25
PTPRT-205ENST00000373193 BCANQ96GW7 911 aa13.43□□□□□ -0.26
PTPRT-205ENST00000373193 TRIM41Q8WV44 630 aa13.4□□□□□ -0.26
PTPRT-205ENST00000373193 EIF5BO60841 1220 aaKnown RBP13.37□□□□□ -0.27
PTPRT-205ENST00000373193 ITGAEP38570 1179 aa13.36□□□□□ -0.27
PTPRT-205ENST00000373193 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
PTPRT-205ENST00000373193 CHIC1Q5VXU3 224 aa13.27□□□□□ -0.29
PTPRT-205ENST00000373193 TRIM26Q12899 539 aaPredicted RBP13.26□□□□□ -0.29
PTPRT-205ENST00000373193 BCL11AQ9H165 835 aa13.25□□□□□ -0.29
PTPRT-205ENST00000373193 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
PTPRT-205ENST00000373193 DIEXFQ68CQ4 756 aaKnown RBP13.2□□□□□ -0.3
PTPRT-205ENST00000373193 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
PTPRT-205ENST00000373193 HNRNPUL2Q1KMD3 747 aaKnown RBP13.19□□□□□ -0.3
PTPRT-205ENST00000373193 NISCHQ9Y2I1 1504 aa13.17□□□□□ -0.3
PTPRT-205ENST00000373193 CDK11AQ9UQ88 783 aaPredicted RBP13.15□□□□□ -0.3
PTPRT-205ENST00000373193 NPM2Q86SE8 214 aaKnown RBP13.1□□□□□ -0.31
PTPRT-205ENST00000373193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
PTPRT-205ENST00000373193 GLIPR1L2Q4G1C9 344 aa13.07□□□□□ -0.32
PTPRT-205ENST00000373193 ZBTB47Q9UFB7 747 aaPredicted RBP13□□□□□ -0.33
PTPRT-205ENST00000373193 ANP32AP39687 249 aaKnown RBP12.99□□□□□ -0.33
PTPRT-205ENST00000373193 ARXQ96QS3 562 aa12.99□□□□□ -0.33
PTPRT-205ENST00000373193 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
PTPRT-205ENST00000373193 CANXP27824 592 aaKnown RBP12.97□□□□□ -0.33
PTPRT-205ENST00000373193 NBR1Q14596 966 aa12.95□□□□□ -0.34
PTPRT-205ENST00000373193 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
PTPRT-205ENST00000373193 ANP32BQ92688 251 aaKnown RBP12.92□□□□□ -0.34
PTPRT-205ENST00000373193 NEUROD1Q13562 356 aa12.91□□□□□ -0.34
PTPRT-205ENST00000373193 ANP32CO43423 234 aa12.86□□□□□ -0.35
PTPRT-205ENST00000373193 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
PTPRT-205ENST00000373193 HSP90AA1P07900 732 aaKnown RBP12.83□□□□□ -0.36
PTPRT-205ENST00000373193 ACIN1Q9UKV3 1341 aaKnown RBP12.82□□□□□ -0.36
PTPRT-205ENST00000373193 FAM50AQ14320 339 aaKnown RBP12.8□□□□□ -0.36
PTPRT-205ENST00000373193 TRIM52Q96A61 297 aa12.77□□□□□ -0.36
PTPRT-205ENST00000373193 FKBP8Q14318 412 aa12.73□□□□□ -0.37
PTPRT-205ENST00000373193 AMER1Q5JTC6 1135 aaPredicted RBP12.68□□□□□ -0.38
PTPRT-205ENST00000373193 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
PTPRT-205ENST00000373193 UPF2Q9HAU5 1272 aaKnown RBP12.61□□□□□ -0.39
PTPRT-205ENST00000373193 TNNT2P45379 298 aaPredicted RBP12.6□□□□□ -0.39
PTPRT-205ENST00000373193 NEFMP07197 916 aa12.57□□□□□ -0.4
PTPRT-205ENST00000373193 IRX6P78412 446 aaPredicted RBP12.55□□□□□ -0.4
PTPRT-205ENST00000373193 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
PTPRT-205ENST00000373193 NAP1L5Q96NT1 182 aaPredicted RBP12.53□□□□□ -0.4
PTPRT-205ENST00000373193 TPRNQ4KMQ1 711 aa12.52□□□□□ -0.41
PTPRT-205ENST00000373193 CDK11BP21127 795 aaKnown RBP12.51□□□□□ -0.41
PTPRT-205ENST00000373193 HNRNPUQ00839 825 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPRT-205ENST00000373193 TRIM44Q96DX7 344 aaPredicted RBP12.5□□□□□ -0.41
PTPRT-205ENST00000373193 CCDC136Q96JN2 1154 aa12.5□□□□□ -0.41
PTPRT-205ENST00000373193 SCAF1Q9H7N4 1312 aaKnown RBP12.5□□□□□ -0.41
PTPRT-205ENST00000373193 FAM9BQ8IZU0 186 aa12.49□□□□□ -0.41
PTPRT-205ENST00000373193 PTMAP06454 111 aaKnown RBP12.44□□□□□ -0.42
PTPRT-205ENST00000373193 DNTTIP2Q5QJE6 756 aaKnown RBP12.44□□□□□ -0.42
PTPRT-205ENST00000373193 NCLP19338 710 aaKnown RBP12.42□□□□□ -0.42
PTPRT-205ENST00000373193 ARID4BQ4LE39 1312 aaPredicted RBP12.42□□□□□ -0.42
PTPRT-205ENST00000373193 TULP1O00294 542 aaPredicted RBP12.4□□□□□ -0.42
PTPRT-205ENST00000373193 ANP32EQ9BTT0 268 aa12.38□□□□□ -0.43
PTPRT-205ENST00000373193 LAS1LQ9Y4W2 734 aaKnown RBP12.38□□□□□ -0.43
PTPRT-205ENST00000373193 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.35□□□□□ -0.43
PTPRT-205ENST00000373193 DDX10Q13206 875 aaKnown RBP12.35□□□□□ -0.43
PTPRT-205ENST00000373193 ARID3CA6NKF2 412 aa12.35□□□□□ -0.43
PTPRT-205ENST00000373193 ARID3AQ99856 593 aa12.34□□□□□ -0.43
PTPRT-205ENST00000373193 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.43
PTPRT-205ENST00000373193 BECN1Q14457 450 aa12.31□□□□□ -0.44
PTPRT-205ENST00000373193 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
PTPRT-205ENST00000373193 SENP3-EIF4A1A0A087X0R7 540 aa12.3□□□□□ -0.44
PTPRT-205ENST00000373193 DDRGK1Q96HY6 314 aa12.3□□□□□ -0.44
PTPRT-205ENST00000373193 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
PTPRT-205ENST00000373193 TAOK2Q9UL54 1235 aa12.27□□□□□ -0.44
PTPRT-205ENST00000373193 GOLGA6L22H0YM25 854 aa12.27□□□□□ -0.45
PTPRT-205ENST00000373193 PLCB2Q00722 1185 aa12.26□□□□□ -0.45
PTPRT-205ENST00000373193 MYH16Q9H6N6 1097 aa12.26□□□□□ -0.45
PTPRT-205ENST00000373193 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
PTPRT-205ENST00000373193 ZRSR1Q15695 479 aaKnown RBP12.25□□□□□ -0.45
PTPRT-205ENST00000373193 TMC1Q8TDI8 760 aa12.23□□□□□ -0.45
PTPRT-205ENST00000373193 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms