RNA–Protein interactions for RNA: ENST00000543426.5

GLI1-207, Transcript of GLI family zinc finger 1, humanhuman

TSL 5 BASIC

Gene GLI1, Length 3,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-207ENST00000543426 NISCHQ9Y2I1 1504 aa21.18■□□□□ 0.98
GLI1-207ENST00000543426 CCDC180Q9P1Z9 1646 aa18.11■□□□□ 0.49
GLI1-207ENST00000543426 SHROOM4Q9ULL8 1493 aa17.93■□□□□ 0.46
GLI1-207ENST00000543426 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
GLI1-207ENST00000543426 DCAF8L2P0C7V8 631 aa17.58■□□□□ 0.4
GLI1-207ENST00000543426 SUPT5HO00267 1087 aaKnown RBP17.53■□□□□ 0.4
GLI1-207ENST00000543426 DCAF1Q9Y4B6 1507 aa17.4■□□□□ 0.38
GLI1-207ENST00000543426 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
GLI1-207ENST00000543426 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
GLI1-207ENST00000543426 SCRIBQ14160 1630 aa16.92■□□□□ 0.3
GLI1-207ENST00000543426 ABCC9O60706 1549 aa16.87■□□□□ 0.29
GLI1-207ENST00000543426 NACADO15069 1562 aa16.77■□□□□ 0.27
GLI1-207ENST00000543426 RSF1Q96T23 1441 aaPredicted RBP16.69■□□□□ 0.26
GLI1-207ENST00000543426 RB1CC1Q8TDY2 1594 aa16.52■□□□□ 0.24
GLI1-207ENST00000543426 CECR2Q9BXF3 1484 aa16.5■□□□□ 0.23
GLI1-207ENST00000543426 MROH2BQ7Z745 1585 aa16.44■□□□□ 0.22
GLI1-207ENST00000543426 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
GLI1-207ENST00000543426 TRIM41Q8WV44 630 aa16.36■□□□□ 0.21
GLI1-207ENST00000543426 WIZO95785 1651 aa16.35■□□□□ 0.21
GLI1-207ENST00000543426 PCGF6Q9BYE7 350 aa16.31■□□□□ 0.2
GLI1-207ENST00000543426 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
GLI1-207ENST00000543426 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
GLI1-207ENST00000543426 HRCP23327 699 aa16.23■□□□□ 0.19
GLI1-207ENST00000543426 FAM9AQ8IZU1 332 aaPredicted RBP16.19■□□□□ 0.18
GLI1-207ENST00000543426 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
GLI1-207ENST00000543426 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
GLI1-207ENST00000543426 EIF4G1Q04637 1599 aaKnown RBP16.07■□□□□ 0.16
GLI1-207ENST00000543426 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
GLI1-207ENST00000543426 PABPN1Q86U42 306 aaKnown RBP eCLIP16.05■□□□□ 0.16
GLI1-207ENST00000543426 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
GLI1-207ENST00000543426 BICRAQ9NZM4 1560 aa16.03■□□□□ 0.16
GLI1-207ENST00000543426 CCDC88BA6NC98 1476 aa16.02■□□□□ 0.16
GLI1-207ENST00000543426 SMARCA2P51531 1590 aa16.01■□□□□ 0.15
GLI1-207ENST00000543426 ABCC8Q09428 1581 aa15.94■□□□□ 0.14
GLI1-207ENST00000543426 PPARGC1BQ86YN6 1023 aaKnown RBP15.87■□□□□ 0.13
GLI1-207ENST00000543426 PEG3Q9GZU2 1588 aa15.86■□□□□ 0.13
GLI1-207ENST00000543426 ATAD2BQ9ULI0 1458 aa15.77■□□□□ 0.11
GLI1-207ENST00000543426 SOGA1O94964 1423 aa15.75■□□□□ 0.11
GLI1-207ENST00000543426 BAZ1BQ9UIG0 1483 aaKnown RBP15.74■□□□□ 0.11
GLI1-207ENST00000543426 WRNQ14191 1432 aaPredicted RBP eCLIP15.71■□□□□ 0.11
GLI1-207ENST00000543426 EEA1Q15075 1411 aa15.7■□□□□ 0.1
GLI1-207ENST00000543426 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
GLI1-207ENST00000543426 CSRNP3Q8WYN3 585 aa15.67■□□□□ 0.1
GLI1-207ENST00000543426 RUSC2Q8N2Y8 1516 aa15.66■□□□□ 0.1
GLI1-207ENST00000543426 CEP162Q5TB80 1403 aa15.64■□□□□ 0.09
GLI1-207ENST00000543426 TNIKQ9UKE5 1360 aa15.63■□□□□ 0.09
GLI1-207ENST00000543426 SYNJ1O43426 1573 aa15.62■□□□□ 0.09
GLI1-207ENST00000543426 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
GLI1-207ENST00000543426 GOLGA3Q08378 1498 aa15.58■□□□□ 0.09
GLI1-207ENST00000543426 CEP164Q9UPV0 1460 aa15.51■□□□□ 0.07
GLI1-207ENST00000543426 TTBK1Q5TCY1 1321 aaPredicted RBP15.5■□□□□ 0.07
GLI1-207ENST00000543426 HMGXB3Q12766 1538 aa15.5■□□□□ 0.07
GLI1-207ENST00000543426 NCAPD3P42695 1498 aa15.49■□□□□ 0.07
GLI1-207ENST00000543426 KIF21BO75037 1637 aa15.49■□□□□ 0.07
GLI1-207ENST00000543426 TOP2BQ02880 1626 aa15.46■□□□□ 0.07
GLI1-207ENST00000543426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
GLI1-207ENST00000543426 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
GLI1-207ENST00000543426 CCER1Q8TC90 406 aaPredicted RBP15.41■□□□□ 0.06
GLI1-207ENST00000543426 CLIP1P30622 1438 aa15.39■□□□□ 0.05
GLI1-207ENST00000543426 RAPGEF2Q9Y4G8 1499 aa15.38■□□□□ 0.05
GLI1-207ENST00000543426 CFTRP13569 1480 aa15.33■□□□□ 0.04
GLI1-207ENST00000543426 CUX1P39880 1505 aa15.32■□□□□ 0.04
GLI1-207ENST00000543426 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
GLI1-207ENST00000543426 VPS8Q8N3P4 1428 aa15.3■□□□□ 0.04
GLI1-207ENST00000543426 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
GLI1-207ENST00000543426 APLP2Q06481 763 aa15.26■□□□□ 0.03
GLI1-207ENST00000543426 PRXQ9BXM0 1461 aa15.26■□□□□ 0.03
GLI1-207ENST00000543426 KIF27Q86VH2 1401 aa15.24■□□□□ 0.03
GLI1-207ENST00000543426 PRDM2Q13029 1718 aa15.24■□□□□ 0.03
GLI1-207ENST00000543426 CADPSQ9ULU8 1353 aa15.19■□□□□ 0.02
GLI1-207ENST00000543426 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
GLI1-207ENST00000543426 HNRNPUL2Q1KMD3 747 aaKnown RBP15.16■□□□□ 0.02
GLI1-207ENST00000543426 PELP1Q8IZL8 1130 aaKnown RBP15.15■□□□□ 0.02
GLI1-207ENST00000543426 ARAP1Q96P48 1450 aa15.14■□□□□ 0.01
GLI1-207ENST00000543426 CUX2O14529 1486 aa15.12■□□□□ 0.01
GLI1-207ENST00000543426 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0.01
GLI1-207ENST00000543426 IGF1RP08069 1367 aa15.06■□□□□ 0
GLI1-207ENST00000543426 FANCD2Q9BXW9 1451 aa15.05■□□□□ -0
GLI1-207ENST00000543426 ARHGAP35Q9NRY4 1499 aa15.03■□□□□ -0
GLI1-207ENST00000543426 KANK4Q5T7N3 995 aaPredicted RBP15.02□□□□□ -0.01
GLI1-207ENST00000543426 CARMIL1Q5VZK9 1371 aa15.01□□□□□ -0.01
GLI1-207ENST00000543426 DIEXFQ68CQ4 756 aaKnown RBP15.01□□□□□ -0.01
GLI1-207ENST00000543426 DNMBPQ6XZF7 1577 aa14.97□□□□□ -0.01
GLI1-207ENST00000543426 NESP48681 1621 aa14.95□□□□□ -0.02
GLI1-207ENST00000543426 ZNF316A6NFI3 1004 aaPredicted RBP14.94□□□□□ -0.02
GLI1-207ENST00000543426 TOPBP1Q92547 1522 aa14.93□□□□□ -0.02
GLI1-207ENST00000543426 RAD54L2Q9Y4B4 1467 aa14.92□□□□□ -0.02
GLI1-207ENST00000543426 POLA1P09884 1462 aaPredicted RBP14.92□□□□□ -0.02
GLI1-207ENST00000543426 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
GLI1-207ENST00000543426 ABCA10Q8WWZ4 1543 aa14.9□□□□□ -0.02
GLI1-207ENST00000543426 CCNB3Q8WWL7 1395 aa14.88□□□□□ -0.03
GLI1-207ENST00000543426 LAMC3Q9Y6N6 1575 aa14.87□□□□□ -0.03
GLI1-207ENST00000543426 TIAM1Q13009 1591 aa14.87□□□□□ -0.03
GLI1-207ENST00000543426 DHX57Q6P158 1386 aaKnown RBP14.85□□□□□ -0.03
GLI1-207ENST00000543426 MAP3K1Q13233 1512 aa14.84□□□□□ -0.03
GLI1-207ENST00000543426 FHAD1B1AJZ9 1412 aa14.84□□□□□ -0.03
GLI1-207ENST00000543426 CLSPNQ9HAW4 1339 aa14.84□□□□□ -0.03
GLI1-207ENST00000543426 SCAF1Q9H7N4 1312 aaKnown RBP14.83□□□□□ -0.04
GLI1-207ENST00000543426 P3H3Q8IVL6 736 aa14.83□□□□□ -0.04
GLI1-207ENST00000543426 CUL7Q14999 1698 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms