RNA–Protein interactions for RNA: ENST00000557308.1

AL079307.2-201, humanhuman

TSL 3 BASIC

Gene AL079307.2, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL079307.2-201ENST00000557308 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
AL079307.2-201ENST00000557308 CCDC180Q9P1Z9 1646 aa21.13■□□□□ 0.97
AL079307.2-201ENST00000557308 ABCC9O60706 1549 aa20.92■□□□□ 0.94
AL079307.2-201ENST00000557308 RB1CC1Q8TDY2 1594 aa20.01■□□□□ 0.79
AL079307.2-201ENST00000557308 NACADO15069 1562 aa19.95■□□□□ 0.78
AL079307.2-201ENST00000557308 DCAF8L2P0C7V8 631 aa19.91■□□□□ 0.78
AL079307.2-201ENST00000557308 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
AL079307.2-201ENST00000557308 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
AL079307.2-201ENST00000557308 DCAF1Q9Y4B6 1507 aa19.63■□□□□ 0.73
AL079307.2-201ENST00000557308 PABPN1Q86U42 306 aaKnown RBP eCLIP19.53■□□□□ 0.72
AL079307.2-201ENST00000557308 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
AL079307.2-201ENST00000557308 BICRAQ9NZM4 1560 aa19.41■□□□□ 0.7
AL079307.2-201ENST00000557308 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
AL079307.2-201ENST00000557308 SCRIBQ14160 1630 aa19.29■□□□□ 0.68
AL079307.2-201ENST00000557308 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
AL079307.2-201ENST00000557308 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
AL079307.2-201ENST00000557308 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
AL079307.2-201ENST00000557308 CECR2Q9BXF3 1484 aa18.83■□□□□ 0.6
AL079307.2-201ENST00000557308 NCAPD3P42695 1498 aa18.45■□□□□ 0.54
AL079307.2-201ENST00000557308 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
AL079307.2-201ENST00000557308 ATAD2BQ9ULI0 1458 aa18.42■□□□□ 0.54
AL079307.2-201ENST00000557308 BAZ1AQ9NRL2 1556 aaPredicted RBP18.4■□□□□ 0.54
AL079307.2-201ENST00000557308 SMARCA2P51531 1590 aa18.37■□□□□ 0.53
AL079307.2-201ENST00000557308 HMGXB3Q12766 1538 aa18.32■□□□□ 0.52
AL079307.2-201ENST00000557308 MROH2BQ7Z745 1585 aa18.28■□□□□ 0.52
AL079307.2-201ENST00000557308 PEG3Q9GZU2 1588 aa18.26■□□□□ 0.51
AL079307.2-201ENST00000557308 BAZ1BQ9UIG0 1483 aaKnown RBP18.25■□□□□ 0.51
AL079307.2-201ENST00000557308 ERCC6Q03468 1493 aa18.05■□□□□ 0.48
AL079307.2-201ENST00000557308 NESP48681 1621 aa18.04■□□□□ 0.48
AL079307.2-201ENST00000557308 WIZO95785 1651 aa18.03■□□□□ 0.48
AL079307.2-201ENST00000557308 RSF1Q96T23 1441 aaPredicted RBP18.03■□□□□ 0.48
AL079307.2-201ENST00000557308 LAMC3Q9Y6N6 1575 aa17.95■□□□□ 0.46
AL079307.2-201ENST00000557308 CUX2O14529 1486 aa17.93■□□□□ 0.46
AL079307.2-201ENST00000557308 CADPSQ9ULU8 1353 aa17.9■□□□□ 0.46
AL079307.2-201ENST00000557308 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
AL079307.2-201ENST00000557308 PDS5BQ9NTI5 1447 aa17.87■□□□□ 0.45
AL079307.2-201ENST00000557308 THOC2Q8NI27 1593 aaKnown RBP17.79■□□□□ 0.44
AL079307.2-201ENST00000557308 KIF21AQ7Z4S6 1674 aa17.75■□□□□ 0.43
AL079307.2-201ENST00000557308 CFTRP13569 1480 aa17.75■□□□□ 0.43
AL079307.2-201ENST00000557308 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
AL079307.2-201ENST00000557308 FANCD2Q9BXW9 1451 aa17.68■□□□□ 0.42
AL079307.2-201ENST00000557308 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
AL079307.2-201ENST00000557308 CCDC88BA6NC98 1476 aa17.67■□□□□ 0.42
AL079307.2-201ENST00000557308 WDR62O43379 1518 aa17.63■□□□□ 0.41
AL079307.2-201ENST00000557308 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
AL079307.2-201ENST00000557308 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
AL079307.2-201ENST00000557308 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
AL079307.2-201ENST00000557308 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
AL079307.2-201ENST00000557308 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
AL079307.2-201ENST00000557308 ABCC8Q09428 1581 aa17.35■□□□□ 0.37
AL079307.2-201ENST00000557308 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
AL079307.2-201ENST00000557308 IFT140Q96RY7 1462 aa17.31■□□□□ 0.36
AL079307.2-201ENST00000557308 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
AL079307.2-201ENST00000557308 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
AL079307.2-201ENST00000557308 TARBP1Q13395 1621 aaKnown RBP17.17■□□□□ 0.34
AL079307.2-201ENST00000557308 CUX1P39880 1505 aa17.16■□□□□ 0.34
AL079307.2-201ENST00000557308 OSCARQ8IYS5 282 aa17.15■□□□□ 0.34
AL079307.2-201ENST00000557308 EIF4G3O43432 1585 aaKnown RBP17.15■□□□□ 0.34
AL079307.2-201ENST00000557308 SOGA1O94964 1423 aa17.14■□□□□ 0.33
AL079307.2-201ENST00000557308 FGD5Q6ZNL6 1462 aa17.14■□□□□ 0.33
AL079307.2-201ENST00000557308 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
AL079307.2-201ENST00000557308 AQRO60306 1485 aaKnown RBP eCLIP17.13■□□□□ 0.33
AL079307.2-201ENST00000557308 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.32
AL079307.2-201ENST00000557308 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
AL079307.2-201ENST00000557308 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
AL079307.2-201ENST00000557308 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
AL079307.2-201ENST00000557308 FBLN2P98095 1184 aa16.97■□□□□ 0.31
AL079307.2-201ENST00000557308 GRIN2BQ13224 1484 aa16.97■□□□□ 0.31
AL079307.2-201ENST00000557308 SNAPC4Q5SXM2 1469 aa16.97■□□□□ 0.31
AL079307.2-201ENST00000557308 TRIM41Q8WV44 630 aa16.96■□□□□ 0.31
AL079307.2-201ENST00000557308 TOP2BQ02880 1626 aa16.95■□□□□ 0.3
AL079307.2-201ENST00000557308 GAPVD1Q14C86 1478 aa16.94■□□□□ 0.3
AL079307.2-201ENST00000557308 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
AL079307.2-201ENST00000557308 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
AL079307.2-201ENST00000557308 BIVM-ERCC5R4GMW8 1640 aa16.92■□□□□ 0.3
AL079307.2-201ENST00000557308 CHD1O14646 1710 aa16.91■□□□□ 0.3
AL079307.2-201ENST00000557308 ABCA5Q8WWZ7 1642 aa16.89■□□□□ 0.29
AL079307.2-201ENST00000557308 CHMP7Q8WUX9 453 aaPredicted RBP16.89■□□□□ 0.29
AL079307.2-201ENST00000557308 SYNJ2O15056 1496 aa16.88■□□□□ 0.29
AL079307.2-201ENST00000557308 ARHGEF11O15085 1522 aa16.87■□□□□ 0.29
AL079307.2-201ENST00000557308 RIMBP3CA6NJZ7 1639 aa16.85■□□□□ 0.29
AL079307.2-201ENST00000557308 RIMBP3BA6NNM3 1639 aa16.85■□□□□ 0.29
AL079307.2-201ENST00000557308 RIMBP3Q9UFD9 1639 aa16.85■□□□□ 0.29
AL079307.2-201ENST00000557308 PBRM1Q86U86 1689 aa16.84■□□□□ 0.29
AL079307.2-201ENST00000557308 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
AL079307.2-201ENST00000557308 ADAMTS12P58397 1594 aa16.76■□□□□ 0.27
AL079307.2-201ENST00000557308 GRIN2AQ12879 1464 aa16.75■□□□□ 0.27
AL079307.2-201ENST00000557308 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
AL079307.2-201ENST00000557308 FHAD1B1AJZ9 1412 aa16.74■□□□□ 0.27
AL079307.2-201ENST00000557308 CYB5RLQ6IPT4 315 aa16.74■□□□□ 0.27
AL079307.2-201ENST00000557308 ARAP1Q96P48 1450 aa16.73■□□□□ 0.27
AL079307.2-201ENST00000557308 NUP160Q12769 1436 aa16.7■□□□□ 0.26
AL079307.2-201ENST00000557308 KIF27Q86VH2 1401 aa16.67■□□□□ 0.26
AL079307.2-201ENST00000557308 CEP170Q5SW79 1584 aa16.65■□□□□ 0.26
AL079307.2-201ENST00000557308 IGF1RP08069 1367 aa16.62■□□□□ 0.25
AL079307.2-201ENST00000557308 ERCC6L2Q5T890 1561 aa16.55■□□□□ 0.24
AL079307.2-201ENST00000557308 SHROOM2Q13796 1616 aa16.54■□□□□ 0.24
AL079307.2-201ENST00000557308 CUL7Q14999 1698 aa16.53■□□□□ 0.24
AL079307.2-201ENST00000557308 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
AL079307.2-201ENST00000557308 RUSC2Q8N2Y8 1516 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms