RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 NISCHQ9Y2I1 1504 aa24.74■■□□□ 1.55
MRPL55-204ENST00000348259 ABCC9O60706 1549 aa22.48■■□□□ 1.19
MRPL55-204ENST00000348259 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
MRPL55-204ENST00000348259 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
MRPL55-204ENST00000348259 RB1CC1Q8TDY2 1594 aa21.34■■□□□ 1.01
MRPL55-204ENST00000348259 NACADO15069 1562 aa21.16■□□□□ 0.98
MRPL55-204ENST00000348259 UNC13AQ9UPW8 1703 aa20.99■□□□□ 0.95
MRPL55-204ENST00000348259 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
MRPL55-204ENST00000348259 BICRAQ9NZM4 1560 aa20.85■□□□□ 0.93
MRPL55-204ENST00000348259 PABPN1Q86U42 306 aaKnown RBP eCLIP20.81■□□□□ 0.92
MRPL55-204ENST00000348259 DCAF8L2P0C7V8 631 aa20.66■□□□□ 0.9
MRPL55-204ENST00000348259 SHROOM4Q9ULL8 1493 aa20.51■□□□□ 0.87
MRPL55-204ENST00000348259 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
MRPL55-204ENST00000348259 ZCCHC6Q5VYS8 1495 aaKnown RBP20.48■□□□□ 0.87
MRPL55-204ENST00000348259 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
MRPL55-204ENST00000348259 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
MRPL55-204ENST00000348259 EIF4G1Q04637 1599 aaKnown RBP20.28■□□□□ 0.84
MRPL55-204ENST00000348259 SCRIBQ14160 1630 aa20.26■□□□□ 0.83
MRPL55-204ENST00000348259 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
MRPL55-204ENST00000348259 CUX2O14529 1486 aa19.55■□□□□ 0.72
MRPL55-204ENST00000348259 NCAPD3P42695 1498 aa19.55■□□□□ 0.72
MRPL55-204ENST00000348259 ATAD2BQ9ULI0 1458 aa19.43■□□□□ 0.7
MRPL55-204ENST00000348259 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
MRPL55-204ENST00000348259 SMARCA4P51532 1647 aa19.37■□□□□ 0.69
MRPL55-204ENST00000348259 ERCC6Q03468 1493 aa19.36■□□□□ 0.69
MRPL55-204ENST00000348259 SMARCA2P51531 1590 aa19.34■□□□□ 0.69
MRPL55-204ENST00000348259 NESP48681 1621 aa19.29■□□□□ 0.68
MRPL55-204ENST00000348259 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
MRPL55-204ENST00000348259 THOC2Q8NI27 1593 aaKnown RBP19.24■□□□□ 0.67
MRPL55-204ENST00000348259 BAZ1AQ9NRL2 1556 aaPredicted RBP19.19■□□□□ 0.66
MRPL55-204ENST00000348259 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
MRPL55-204ENST00000348259 LAMC3Q9Y6N6 1575 aa19.15■□□□□ 0.66
MRPL55-204ENST00000348259 KIF21AQ7Z4S6 1674 aa19.08■□□□□ 0.65
MRPL55-204ENST00000348259 MROH2BQ7Z745 1585 aa19.05■□□□□ 0.64
MRPL55-204ENST00000348259 PDS5BQ9NTI5 1447 aa18.95■□□□□ 0.62
MRPL55-204ENST00000348259 WDR62O43379 1518 aa18.89■□□□□ 0.61
MRPL55-204ENST00000348259 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
MRPL55-204ENST00000348259 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
MRPL55-204ENST00000348259 WIZO95785 1651 aa18.8■□□□□ 0.6
MRPL55-204ENST00000348259 CEP164Q9UPV0 1460 aa18.69■□□□□ 0.58
MRPL55-204ENST00000348259 CFTRP13569 1480 aa18.66■□□□□ 0.58
MRPL55-204ENST00000348259 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
MRPL55-204ENST00000348259 TRIM41Q8WV44 630 aa18.65■□□□□ 0.58
MRPL55-204ENST00000348259 URB2Q14146 1524 aaKnown RBP18.58■□□□□ 0.56
MRPL55-204ENST00000348259 TOP2AP11388 1531 aaKnown RBP18.55■□□□□ 0.56
MRPL55-204ENST00000348259 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
MRPL55-204ENST00000348259 RSF1Q96T23 1441 aaPredicted RBP18.53■□□□□ 0.56
MRPL55-204ENST00000348259 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
MRPL55-204ENST00000348259 RIMBP3CA6NJZ7 1639 aa18.41■□□□□ 0.54
MRPL55-204ENST00000348259 RIMBP3BA6NNM3 1639 aa18.41■□□□□ 0.54
MRPL55-204ENST00000348259 RIMBP3Q9UFD9 1639 aa18.41■□□□□ 0.54
MRPL55-204ENST00000348259 ZNF608Q9ULD9 1512 aaPredicted RBP18.37■□□□□ 0.53
MRPL55-204ENST00000348259 IFT140Q96RY7 1462 aa18.35■□□□□ 0.53
MRPL55-204ENST00000348259 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
MRPL55-204ENST00000348259 ARHGEF11O15085 1522 aa18.31■□□□□ 0.52
MRPL55-204ENST00000348259 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
MRPL55-204ENST00000348259 EIF4G3O43432 1585 aaKnown RBP18.29■□□□□ 0.52
MRPL55-204ENST00000348259 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
MRPL55-204ENST00000348259 DNMBPQ6XZF7 1577 aa18.23■□□□□ 0.51
MRPL55-204ENST00000348259 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
MRPL55-204ENST00000348259 CHD1O14646 1710 aa18.21■□□□□ 0.51
MRPL55-204ENST00000348259 ARAP1Q96P48 1450 aa18.14■□□□□ 0.49
MRPL55-204ENST00000348259 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.498e-7■■■■■ 27.9
MRPL55-204ENST00000348259 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
MRPL55-204ENST00000348259 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
MRPL55-204ENST00000348259 WDR97A6NE52 1622 aa18.03■□□□□ 0.48
MRPL55-204ENST00000348259 CYB5RLQ6IPT4 315 aa18.03■□□□□ 0.48
MRPL55-204ENST00000348259 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
MRPL55-204ENST00000348259 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
MRPL55-204ENST00000348259 SOGA1O94964 1423 aa17.94■□□□□ 0.46
MRPL55-204ENST00000348259 FGD5Q6ZNL6 1462 aa17.94■□□□□ 0.46
MRPL55-204ENST00000348259 TDRD9Q8NDG6 1382 aaKnown RBP17.92■□□□□ 0.46
MRPL55-204ENST00000348259 CUX1P39880 1505 aa17.92■□□□□ 0.46
MRPL55-204ENST00000348259 MAGI1Q96QZ7 1491 aaPredicted RBP17.91■□□□□ 0.46
MRPL55-204ENST00000348259 SYNJ1O43426 1573 aa17.89■□□□□ 0.45
MRPL55-204ENST00000348259 FBLN2P98095 1184 aa17.86■□□□□ 0.45
MRPL55-204ENST00000348259 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
MRPL55-204ENST00000348259 GRIN2BQ13224 1484 aa17.85■□□□□ 0.45
MRPL55-204ENST00000348259 PBRM1Q86U86 1689 aa17.84■□□□□ 0.45
MRPL55-204ENST00000348259 TRHP20396 242 aaPredicted RBP17.84■□□□□ 0.45
MRPL55-204ENST00000348259 ABCA5Q8WWZ7 1642 aa17.8■□□□□ 0.44
MRPL55-204ENST00000348259 CHMP7Q8WUX9 453 aaPredicted RBP17.76■□□□□ 0.43
MRPL55-204ENST00000348259 ABCA10Q8WWZ4 1543 aa17.76■□□□□ 0.43
MRPL55-204ENST00000348259 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
MRPL55-204ENST00000348259 ERCC6L2Q5T890 1561 aa17.7■□□□□ 0.42
MRPL55-204ENST00000348259 ADAMTS12P58397 1594 aa17.66■□□□□ 0.42
MRPL55-204ENST00000348259 SHROOM2Q13796 1616 aa17.65■□□□□ 0.42
MRPL55-204ENST00000348259 GRIN2AQ12879 1464 aa17.65■□□□□ 0.42
MRPL55-204ENST00000348259 NUP160Q12769 1436 aa17.64■□□□□ 0.42
MRPL55-204ENST00000348259 CEP170Q5SW79 1584 aa17.64■□□□□ 0.41
MRPL55-204ENST00000348259 BIVM-ERCC5R4GMW8 1640 aa17.6■□□□□ 0.41
MRPL55-204ENST00000348259 KIF13AQ9H1H9 1805 aa17.56■□□□□ 0.4
MRPL55-204ENST00000348259 TOP2BQ02880 1626 aa17.56■□□□□ 0.4
MRPL55-204ENST00000348259 WRNQ14191 1432 aaPredicted RBP eCLIP17.54■□□□□ 0.4
MRPL55-204ENST00000348259 FHAD1B1AJZ9 1412 aa17.52■□□□□ 0.4
MRPL55-204ENST00000348259 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.39
MRPL55-204ENST00000348259 AEBP2Q6ZN18 517 aaPredicted RBP17.48■□□□□ 0.39
MRPL55-204ENST00000348259 RUSC2Q8N2Y8 1516 aa17.42■□□□□ 0.38
MRPL55-204ENST00000348259 PRG4Q92954 1404 aaPredicted RBP17.39■□□□□ 0.38
MRPL55-204ENST00000348259 MAPKBP1O60336 1514 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms