RNA–Protein interactions for RNA: ENST00000641601.1

SAMMSON-218, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,847 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-218ENST00000641601 NISCHQ9Y2I1 1504 aa20.99■□□□□ 0.95
SAMMSON-218ENST00000641601 AEBP2Q6ZN18 517 aaPredicted RBP18.05■□□□□ 0.48
SAMMSON-218ENST00000641601 CCDC180Q9P1Z9 1646 aa17.96■□□□□ 0.47
SAMMSON-218ENST00000641601 ZCCHC6Q5VYS8 1495 aaKnown RBP17.8■□□□□ 0.44
SAMMSON-218ENST00000641601 SHROOM4Q9ULL8 1493 aa17.68■□□□□ 0.42
SAMMSON-218ENST00000641601 SUPT5HO00267 1087 aaKnown RBP17.38■□□□□ 0.37
SAMMSON-218ENST00000641601 DCAF1Q9Y4B6 1507 aa17.35■□□□□ 0.37
SAMMSON-218ENST00000641601 ABCC9O60706 1549 aa17.3■□□□□ 0.36
SAMMSON-218ENST00000641601 DCAF8L2P0C7V8 631 aa17.07■□□□□ 0.32
SAMMSON-218ENST00000641601 CHIC1Q5VXU3 224 aa17.05■□□□□ 0.32
SAMMSON-218ENST00000641601 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
SAMMSON-218ENST00000641601 HRCP23327 699 aa16.68■□□□□ 0.26
SAMMSON-218ENST00000641601 SCRIBQ14160 1630 aa16.64■□□□□ 0.25
SAMMSON-218ENST00000641601 RSF1Q96T23 1441 aaPredicted RBP16.58■□□□□ 0.25
SAMMSON-218ENST00000641601 NACADO15069 1562 aa16.52■□□□□ 0.24
SAMMSON-218ENST00000641601 PCGF6Q9BYE7 350 aa16.51■□□□□ 0.23
SAMMSON-218ENST00000641601 RB1CC1Q8TDY2 1594 aa16.5■□□□□ 0.23
SAMMSON-218ENST00000641601 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
SAMMSON-218ENST00000641601 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
SAMMSON-218ENST00000641601 TRIM41Q8WV44 630 aa16.28■□□□□ 0.2
SAMMSON-218ENST00000641601 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
SAMMSON-218ENST00000641601 MROH2BQ7Z745 1585 aa16.27■□□□□ 0.19
SAMMSON-218ENST00000641601 CECR2Q9BXF3 1484 aa16.26■□□□□ 0.19
SAMMSON-218ENST00000641601 WIZO95785 1651 aa16.2■□□□□ 0.18
SAMMSON-218ENST00000641601 BAZ1AQ9NRL2 1556 aaPredicted RBP16.2■□□□□ 0.18
SAMMSON-218ENST00000641601 PPARGC1BQ86YN6 1023 aaKnown RBP16.16■□□□□ 0.18
SAMMSON-218ENST00000641601 EIF4G1Q04637 1599 aaKnown RBP16.12■□□□□ 0.17
SAMMSON-218ENST00000641601 UNC13AQ9UPW8 1703 aa16.09■□□□□ 0.17
SAMMSON-218ENST00000641601 ZEB1P37275 1124 aaPredicted RBP16.07■□□□□ 0.16
SAMMSON-218ENST00000641601 TOP2AP11388 1531 aaKnown RBP16.02■□□□□ 0.15
SAMMSON-218ENST00000641601 FAM9AQ8IZU1 332 aaPredicted RBP16.01■□□□□ 0.15
SAMMSON-218ENST00000641601 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
SAMMSON-218ENST00000641601 SMARCA4P51532 1647 aa16■□□□□ 0.15
SAMMSON-218ENST00000641601 SMARCA2P51531 1590 aa15.91■□□□□ 0.14
SAMMSON-218ENST00000641601 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
SAMMSON-218ENST00000641601 CCDC88BA6NC98 1476 aa15.87■□□□□ 0.13
SAMMSON-218ENST00000641601 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
SAMMSON-218ENST00000641601 WRNQ14191 1432 aaPredicted RBP eCLIP15.77■□□□□ 0.12
SAMMSON-218ENST00000641601 EHMT2Q96KQ7 1210 aa15.77■□□□□ 0.11
SAMMSON-218ENST00000641601 EEA1Q15075 1411 aa15.76■□□□□ 0.11
SAMMSON-218ENST00000641601 PEG3Q9GZU2 1588 aa15.76■□□□□ 0.11
SAMMSON-218ENST00000641601 TNIKQ9UKE5 1360 aa15.69■□□□□ 0.1
SAMMSON-218ENST00000641601 CEP162Q5TB80 1403 aa15.66■□□□□ 0.1
SAMMSON-218ENST00000641601 SOGA1O94964 1423 aa15.65■□□□□ 0.1
SAMMSON-218ENST00000641601 CSRNP3Q8WYN3 585 aa15.59■□□□□ 0.09
SAMMSON-218ENST00000641601 GOLGA3Q08378 1498 aa15.59■□□□□ 0.09
SAMMSON-218ENST00000641601 RUSC2Q8N2Y8 1516 aa15.56■□□□□ 0.08
SAMMSON-218ENST00000641601 KIF21BO75037 1637 aa15.55■□□□□ 0.08
SAMMSON-218ENST00000641601 CC2D2AQ9P2K1 1620 aa15.55■□□□□ 0.08
SAMMSON-218ENST00000641601 CCER1Q8TC90 406 aaPredicted RBP15.53■□□□□ 0.08
SAMMSON-218ENST00000641601 SYNJ1O43426 1573 aa15.52■□□□□ 0.07
SAMMSON-218ENST00000641601 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.07
SAMMSON-218ENST00000641601 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
SAMMSON-218ENST00000641601 CEP164Q9UPV0 1460 aa15.5■□□□□ 0.07
SAMMSON-218ENST00000641601 BAZ1BQ9UIG0 1483 aaKnown RBP15.47■□□□□ 0.07
SAMMSON-218ENST00000641601 UBTFP17480 764 aaKnown RBP15.45■□□□□ 0.06
SAMMSON-218ENST00000641601 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
SAMMSON-218ENST00000641601 BIVM-ERCC5R4GMW8 1640 aa15.38■□□□□ 0.05
SAMMSON-218ENST00000641601 CLIP1P30622 1438 aa15.36■□□□□ 0.05
SAMMSON-218ENST00000641601 SCAF1Q9H7N4 1312 aaKnown RBP15.35■□□□□ 0.05
SAMMSON-218ENST00000641601 VPS8Q8N3P4 1428 aa15.35■□□□□ 0.05
SAMMSON-218ENST00000641601 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
SAMMSON-218ENST00000641601 TTBK1Q5TCY1 1321 aaPredicted RBP15.31■□□□□ 0.04
SAMMSON-218ENST00000641601 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
SAMMSON-218ENST00000641601 RAPGEF2Q9Y4G8 1499 aa15.3■□□□□ 0.04
SAMMSON-218ENST00000641601 DIEXFQ68CQ4 756 aaKnown RBP15.29■□□□□ 0.04
SAMMSON-218ENST00000641601 PELP1Q8IZL8 1130 aaKnown RBP15.29■□□□□ 0.04
SAMMSON-218ENST00000641601 ERICH3Q5RHP9 1530 aa15.29■□□□□ 0.04
SAMMSON-218ENST00000641601 NCAPD3P42695 1498 aa15.24■□□□□ 0.03
SAMMSON-218ENST00000641601 ACIN1Q9UKV3 1341 aaKnown RBP15.24■□□□□ 0.03
SAMMSON-218ENST00000641601 PRXQ9BXM0 1461 aa15.22■□□□□ 0.03
SAMMSON-218ENST00000641601 ZNF316A6NFI3 1004 aaPredicted RBP15.2■□□□□ 0.02
SAMMSON-218ENST00000641601 APLP2Q06481 763 aa15.19■□□□□ 0.02
SAMMSON-218ENST00000641601 CENPBP07199 599 aaPredicted RBP15.18■□□□□ 0.02
SAMMSON-218ENST00000641601 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
SAMMSON-218ENST00000641601 CUX1P39880 1505 aa15.16■□□□□ 0.02
SAMMSON-218ENST00000641601 PRDM2Q13029 1718 aa15.15■□□□□ 0.02
SAMMSON-218ENST00000641601 NEUROD1Q13562 356 aa15.15■□□□□ 0.02
SAMMSON-218ENST00000641601 ARAP1Q96P48 1450 aa15.13■□□□□ 0.01
SAMMSON-218ENST00000641601 CFTRP13569 1480 aa15.12■□□□□ 0.01
SAMMSON-218ENST00000641601 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
SAMMSON-218ENST00000641601 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
SAMMSON-218ENST00000641601 CLSPNQ9HAW4 1339 aa15.09■□□□□ 0.01
SAMMSON-218ENST00000641601 RRBP1Q9P2E9 1410 aaKnown RBP15.02■□□□□ -0
SAMMSON-218ENST00000641601 GTF3C3Q9Y5Q9 886 aa15.01□□□□□ -0.01
SAMMSON-218ENST00000641601 CUX2O14529 1486 aa14.99□□□□□ -0.01
SAMMSON-218ENST00000641601 ARHGAP35Q9NRY4 1499 aa14.99□□□□□ -0.01
SAMMSON-218ENST00000641601 RANGAP1P46060 587 aaPredicted RBP14.98□□□□□ -0.01
SAMMSON-218ENST00000641601 DHX57Q6P158 1386 aaKnown RBP14.98□□□□□ -0.01
SAMMSON-218ENST00000641601 NESP48681 1621 aa14.98□□□□□ -0.01
SAMMSON-218ENST00000641601 MAP3K1Q13233 1512 aa14.96□□□□□ -0.01
SAMMSON-218ENST00000641601 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
SAMMSON-218ENST00000641601 MIER1Q8N108 512 aa14.92□□□□□ -0.02
SAMMSON-218ENST00000641601 IGF1RP08069 1367 aa14.9□□□□□ -0.02
SAMMSON-218ENST00000641601 CADPSQ9ULU8 1353 aa14.9□□□□□ -0.02
SAMMSON-218ENST00000641601 CCNB3Q8WWL7 1395 aa14.89□□□□□ -0.03
SAMMSON-218ENST00000641601 TIAM1Q13009 1591 aa14.89□□□□□ -0.03
SAMMSON-218ENST00000641601 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
SAMMSON-218ENST00000641601 FGD5Q6ZNL6 1462 aa14.86□□□□□ -0.03
SAMMSON-218ENST00000641601 CARMIL1Q5VZK9 1371 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms