Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SOD1P00441 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SOD1P00441 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.52■□□□□ 0.88
SOD1P00441 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SOD1P00441 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.52■□□□□ 0.88
SOD1P00441 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.52■□□□□ 0.88
SOD1P00441 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.52■□□□□ 0.88
SOD1P00441 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.52■□□□□ 0.88
SOD1P00441 AL355802.2-201ENST00000402069 882 ntBASIC20.52■□□□□ 0.88
SOD1P00441 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SOD1P00441 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.52■□□□□ 0.88
SOD1P00441 AL138781.1-201ENST00000566567 1274 ntBASIC20.52■□□□□ 0.88
SOD1P00441 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.52■□□□□ 0.88
SOD1P00441 AC008694.1-202ENST00000636953 945 ntBASIC20.52■□□□□ 0.88
SOD1P00441 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SOD1P00441 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SOD1P00441 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SOD1P00441 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SOD1P00441 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SOD1P00441 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
SOD1P00441 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOD1P00441 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOD1P00441 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.51■□□□□ 0.87
SOD1P00441 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOD1P00441 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SOD1P00441 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.51■□□□□ 0.87
SOD1P00441 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.51■□□□□ 0.87
SOD1P00441 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.51■□□□□ 0.87
SOD1P00441 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.51■□□□□ 0.87
SOD1P00441 FEM1AP4-201ENST00000443167 1987 ntBASIC20.51■□□□□ 0.87
SOD1P00441 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SOD1P00441 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
SOD1P00441 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.51■□□□□ 0.87
SOD1P00441 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SOD1P00441 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SOD1P00441 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOD1P00441 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOD1P00441 MKRN4P-201ENST00000444706 1521 ntBASIC20.5■□□□□ 0.87
SOD1P00441 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SOD1P00441 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SOD1P00441 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOD1P00441 AC007322.3-201ENST00000426526 701 ntBASIC20.5■□□□□ 0.87
SOD1P00441 CDV3P1-201ENST00000471403 739 ntBASIC20.5■□□□□ 0.87
SOD1P00441 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.5■□□□□ 0.87
SOD1P00441 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.5■□□□□ 0.87
SOD1P00441 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOD1P00441 AC010980.2-201ENST00000587099 1412 ntBASIC20.5■□□□□ 0.87
SOD1P00441 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SOD1P00441 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SOD1P00441 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.5■□□□□ 0.87
SOD1P00441 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOD1P00441 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
SOD1P00441 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.49■□□□□ 0.87
SOD1P00441 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOD1P00441 AC026310.3-201ENST00000625186 2373 ntBASIC20.49■□□□□ 0.87
SOD1P00441 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.49■□□□□ 0.87
SOD1P00441 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.49■□□□□ 0.87
SOD1P00441 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
SOD1P00441 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SOD1P00441 AC116050.2-201ENST00000612102 1779 ntBASIC20.49■□□□□ 0.87
SOD1P00441 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SOD1P00441 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOD1P00441 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOD1P00441 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOD1P00441 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.48■□□□□ 0.87
SOD1P00441 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SOD1P00441 SLC29A4P1-201ENST00000398760 971 ntBASIC20.48■□□□□ 0.87
SOD1P00441 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.48■□□□□ 0.87
SOD1P00441 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOD1P00441 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.48■□□□□ 0.87
SOD1P00441 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.48■□□□□ 0.87
SOD1P00441 AC098934.4-201ENST00000564127 592 ntBASIC20.48■□□□□ 0.87
SOD1P00441 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOD1P00441 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.48■□□□□ 0.87
SOD1P00441 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SOD1P00441 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SOD1P00441 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOD1P00441 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SOD1P00441 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOD1P00441 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SOD1P00441 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SOD1P00441 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOD1P00441 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.47■□□□□ 0.87
SOD1P00441 AL049796.1-201ENST00000565336 1766 ntBASIC20.47■□□□□ 0.87
SOD1P00441 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOD1P00441 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SOD1P00441 MIPEPP3-201ENST00000412105 444 ntBASIC20.47■□□□□ 0.87
SOD1P00441 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SOD1P00441 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.47■□□□□ 0.87
SOD1P00441 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms