Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 TRIR-205ENST00000592273 783 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01561Q8N1V8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 AC027702.1-201ENST00000563810 1770 ntBASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 IGHV3-19-201ENST00000521488 291 ntBASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 AC233992.3-201ENST00000607491 485 ntBASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 AC011484.1-201ENST00000377652 1995 ntBASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC01561Q8N1V8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 MIR4466-201ENST00000606121 54 ntBASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 AC005224.4-201ENST00000583262 1652 ntBASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LINC01561Q8N1V8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01561Q8N1V8 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms