Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.89□□□□□ -2.271e-6■■■■□ 26
RPS3P23396 EIF6-204ENST00000415116 739 ntTSL 520.43■□□□□ 0.861e-6■■■■□ 26
RPS3P23396 HSD17B12-210ENST00000534053 583 ntTSL 26.82□□□□□ -1.326e-7■■■■□ 26
RPS3P23396 HSD17B12-209ENST00000533802 511 ntTSL 35.01□□□□□ -1.616e-7■■■■□ 26
RPS3P23396 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.2■■□□□ 1.147e-9■■■■□ 26
RPS3P23396 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.17e-9■■■■□ 26
RPS3P23396 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.277e-9■■■■□ 26
RPS3P23396 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.277e-9■■■■□ 26
RPS3P23396 ATP5G2-202ENST00000394349 878 ntTSL 2 BASIC11.91□□□□□ -0.57e-9■■■■□ 26
RPS3P23396 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.72□□□□□ -1.337e-9■■■■□ 26
RPS3P23396 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.042e-7■■■■□ 25.9
RPS3P23396 MAPK1-201ENST00000215832 11022 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.852e-7■■■■□ 25.9
RPS3P23396 CCT7-210ENST00000473786 811 ntTSL 59.2□□□□□ -0.943e-7■■■■□ 25.9
RPS3P23396 SERPINF1-209ENST00000573763 729 ntTSL 38.49□□□□□ -1.055e-22■■■■□ 25.9
RPS3P23396 CES2-205ENST00000563988 371 ntTSL 29.39□□□□□ -0.911e-8■■■■□ 25.9
RPS3P23396 NUCB1-208ENST00000460125 528 ntTSL 210.07□□□□□ -0.87e-8■■■■□ 25.9
RPS3P23396 SNRPA-203ENST00000597353 538 ntTSL 520.98■□□□□ 0.953e-19■■■■□ 25.9
RPS3P23396 SNRPA-204ENST00000598452 679 ntTSL 218.07■□□□□ 0.483e-19■■■■□ 25.9
RPS3P23396 SNRPA-206ENST00000599362 555 ntTSL 217.95■□□□□ 0.463e-19■■■■□ 25.9
RPS3P23396 SNRPA-209ENST00000601253 519 ntTSL 313.55□□□□□ -0.243e-19■■■■□ 25.9
RPS3P23396 SNRPA-208ENST00000600456 592 ntTSL 313.55□□□□□ -0.243e-19■■■■□ 25.9
RPS3P23396 SNRPA-207ENST00000599570 925 ntTSL 313.54□□□□□ -0.243e-19■■■■□ 25.9
RPS3P23396 RUVBL2-212ENST00000627972 1065 ntTSL 5 BASIC10.88□□□□□ -0.677e-7■■■■□ 25.9
RPS3P23396 EIF3I-201ENST00000355082 564 ntTSL 314.22□□□□□ -0.133e-8■■■■□ 25.9
RPS3P23396 PCCB-213ENST00000475214 1295 ntTSL 210.14□□□□□ -0.791e-6■■■■□ 25.9
RPS3P23396 PSMA3-207ENST00000554812 1279 ntTSL 28.58□□□□□ -1.049e-9■■■■□ 25.9
RPS3P23396 PSMA3-209ENST00000555931 606 ntTSL 46.35□□□□□ -1.399e-9■■■■□ 25.9
RPS3P23396 PSMA3-208ENST00000555743 640 ntTSL 26.03□□□□□ -1.449e-9■■■■□ 25.9
RPS3P23396 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.459e-9■■■■□ 25.9
RPS3P23396 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.02□□□□□ -1.619e-9■■■■□ 25.9
RPS3P23396 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.36□□□□□ -1.719e-9■■■■□ 25.9
RPS3P23396 PSMA3-211ENST00000557087 654 ntTSL 32.83□□□□□ -1.969e-9■■■■□ 25.9
RPS3P23396 BSG-206ENST00000572899 582 ntTSL 215.42■□□□□ 0.061e-21■■■■□ 25.9
RPS3P23396 NDUFAB1-203ENST00000562133 503 ntTSL 215.42■□□□□ 0.069e-7■■■■□ 25.9
RPS3P23396 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.41■□□□□ 0.067e-15■■■■□ 25.9
RPS3P23396 TUBB-207ENST00000396384 2823 ntTSL 3 BASIC10.14□□□□□ -0.797e-15■■■■□ 25.9
RPS3P23396 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC9.71□□□□□ -0.857e-15■■■■□ 25.9
RPS3P23396 ABCB6-213ENST00000497882 3008 ntTSL 211.41□□□□□ -0.585e-7■■■■□ 25.9
RPS3P23396 TPP1-212ENST00000530040 551 ntTSL 28.25□□□□□ -1.099e-11■■■■□ 25.9
RPS3P23396 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.562e-8■■■■□ 25.9
RPS3P23396 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.03■□□□□ 0.482e-8■■■■□ 25.9
RPS3P23396 NDUFS3-211ENST00000533507 1769 ntTSL 226.18■■□□□ 1.781e-6■■■■□ 25.9
RPS3P23396 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.931e-6■■■■□ 25.9
RPS3P23396 SELENOP-201ENST00000505309 573 ntTSL 210.77□□□□□ -0.698e-27■■■■□ 25.9
RPS3P23396 SELENOP-206ENST00000509276 738 ntTSL 59.25□□□□□ -0.938e-27■■■■□ 25.9
RPS3P23396 BUD23-208ENST00000432522 1074 ntTSL 218.36■□□□□ 0.531e-6■■■■□ 25.9
RPS3P23396 BUD23-218ENST00000496153 505 ntTSL 418.27■□□□□ 0.521e-6■■■■□ 25.9
RPS3P23396 BUD23-203ENST00000421744 895 ntTSL 218.25■□□□□ 0.511e-6■■■■□ 25.9
RPS3P23396 BUD23-205ENST00000428163 577 ntTSL 313.2□□□□□ -0.31e-6■■■■□ 25.9
RPS3P23396 ERH-201ENST00000216520 668 ntTSL 313.68□□□□□ -0.221e-8■■■■□ 25.8
RPS3P23396 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.261e-8■■■■□ 25.8
RPS3P23396 PKM-213ENST00000564993 663 ntTSL 211.23□□□□□ -0.613e-34■■■■□ 25.8
RPS3P23396 LMNA-204ENST00000368298 1475 ntTSL 1 (best)18.33■□□□□ 0.537e-9■■■■□ 25.8
RPS3P23396 PSMA3-204ENST00000553677 363 ntTSL 51.25□□□□□ -2.211e-8■■■■□ 25.8
RPS3P23396 COG8-202ENST00000562595 2262 ntTSL 521.01■□□□□ 0.952e-8■■■■□ 25.8
RPS3P23396 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.112e-8■■■■□ 25.8
RPS3P23396 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.12e-14■■■■□ 25.8
RPS3P23396 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.062e-14■■■■□ 25.8
RPS3P23396 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.432e-14■■■■□ 25.8
RPS3P23396 DPP4-209ENST00000494507 582 ntTSL 29.77□□□□□ -0.852e-8■■■■□ 25.8
RPS3P23396 RRM1-205ENST00000528442 783 ntTSL 36.09□□□□□ -1.431e-6■■■■□ 25.8
RPS3P23396 ATP5F1-206ENST00000493119 716 ntTSL 314.74□□□□□ -0.055e-7■■■■□ 25.8
RPS3P23396 SNRPA-205ENST00000598923 952 ntTSL 218.04■□□□□ 0.483e-19■■■■□ 25.8
RPS3P23396 EML2-210ENST00000587484 219 ntTSL 313.69□□□□□ -0.223e-7■■■■□ 25.8
RPS3P23396 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC8.3□□□□□ -1.084e-7■■■■□ 25.8
RPS3P23396 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.774e-6■■■■□ 25.7
RPS3P23396 RFXANK-210ENST00000541873 1002 ntTSL 218.9■□□□□ 0.624e-6■■■■□ 25.7
RPS3P23396 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.46■□□□□ 0.384e-6■■■■□ 25.7
RPS3P23396 RFXANK-209ENST00000540981 832 ntTSL 516.96■□□□□ 0.314e-6■■■■□ 25.7
RPS3P23396 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.264e-6■■■■□ 25.7
RPS3P23396 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.87■□□□□ 0.134e-6■■■■□ 25.7
RPS3P23396 SLC2A1-206ENST00000625233 1031 ntTSL 217.24■□□□□ 0.352e-39■■■■□ 25.7
RPS3P23396 SLC2A1-201ENST00000372500 533 ntTSL 315.21■□□□□ 0.032e-39■■■■□ 25.7
RPS3P23396 APEX1-205ENST00000553555 1603 ntTSL 1 (best)13.64□□□□□ -0.239e-7■■■■□ 25.7
RPS3P23396 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.289e-7■■■■□ 25.7
RPS3P23396 APEX1-211ENST00000555839 952 ntTSL 212.89□□□□□ -0.359e-7■■■■□ 25.7
RPS3P23396 APEX1-216ENST00000557159 1803 ntTSL 212.11□□□□□ -0.479e-7■■■■□ 25.7
RPS3P23396 APEX1-219ENST00000557365 831 ntTSL 311.91□□□□□ -0.59e-7■■■■□ 25.7
RPS3P23396 APEX1-202ENST00000398030 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.569e-7■■■■□ 25.7
RPS3P23396 APEX1-210ENST00000555414 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.569e-7■■■■□ 25.7
RPS3P23396 APEX1-206ENST00000553681 899 ntTSL 310.6□□□□□ -0.719e-7■■■■□ 25.7
RPS3P23396 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.49□□□□□ -1.219e-7■■■■□ 25.7
RPS3P23396 CPD-209ENST00000584221 680 ntTSL 34.69□□□□□ -1.662e-6■■■■□ 25.7
RPS3P23396 LDHB-210ENST00000544151 544 ntTSL 215.13■□□□□ 0.012e-9■■■■□ 25.7
RPS3P23396 CDC20-203ENST00000478882 755 ntTSL 210.42□□□□□ -0.741e-10■■■■□ 25.7
RPS3P23396 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.341e-6■■■■□ 25.7
RPS3P23396 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.54■□□□□ 0.241e-8■■■■□ 25.7
RPS3P23396 MYL6-216ENST00000550184 1564 ntTSL 514.36□□□□□ -0.111e-8■■■■□ 25.7
RPS3P23396 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.351e-8■■■■□ 25.7
RPS3P23396 MYL6-210ENST00000548400 573 ntTSL 3 BASIC12.66□□□□□ -0.381e-8■■■■□ 25.7
RPS3P23396 MYL6-215ENST00000549566 685 ntTSL 2 BASIC12.4□□□□□ -0.421e-8■■■■□ 25.7
RPS3P23396 MYL6-206ENST00000547408 683 ntTSL 3 BASIC9.31□□□□□ -0.921e-8■■■■□ 25.7
RPS3P23396 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC8.21□□□□□ -1.11e-8■■■■□ 25.7
RPS3P23396 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.11e-8■■■■□ 25.7
RPS3P23396 MYL6-211ENST00000548580 528 ntTSL 2 BASIC7.31□□□□□ -1.241e-8■■■■□ 25.7
RPS3P23396 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.43□□□□□ -1.541e-8■■■■□ 25.7
RPS3P23396 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.282e-7■■■■□ 25.7
RPS3P23396 MRTO4-202ENST00000479559 409 ntTSL 215.18■□□□□ 0.022e-7■■■■□ 25.7
RPS3P23396 AMBP-203ENST00000540645 1356 ntTSL 212.53□□□□□ -0.41e-52■■■■□ 25.7
RPS3P23396 PRDX2-206ENST00000498785 505 ntTSL 29.08□□□□□ -0.962e-7■■■■□ 25.7
Retrieved 100 of 24,271 protein–RNA pairs in 177.1 ms