RNA–Protein interactions for RNA: ENST00000640277.1

PSMC2-206, Transcript of proteasome 26S subunit, ATPase 2, humanhuman

TSL 5 BASIC

Gene PSMC2, Length 1,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC2-206ENST00000640277 AEBP2Q6ZN18 517 aaPredicted RBP28.05■■■□□ 2.08
PSMC2-206ENST00000640277 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
PSMC2-206ENST00000640277 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
PSMC2-206ENST00000640277 PHF23Q9BUL5 403 aaPredicted RBP23.63■■□□□ 1.37
PSMC2-206ENST00000640277 NISCHQ9Y2I1 1504 aa22.81■■□□□ 1.24
PSMC2-206ENST00000640277 FOXD1Q16676 465 aa22.42■■□□□ 1.18
PSMC2-206ENST00000640277 POTEDQ86YR6 584 aa21.39■■□□□ 1.02
PSMC2-206ENST00000640277 MSH5O43196 834 aa21.17■□□□□ 0.98
PSMC2-206ENST00000640277 ABCC9O60706 1549 aa20.96■□□□□ 0.95
PSMC2-206ENST00000640277 PIAS4Q8N2W9 510 aaPredicted RBP20.85■□□□□ 0.93
PSMC2-206ENST00000640277 PLPPR3Q6T4P5 718 aa20.76■□□□□ 0.91
PSMC2-206ENST00000640277 CCDC180Q9P1Z9 1646 aa20.63■□□□□ 0.89
PSMC2-206ENST00000640277 PPP6R1Q9UPN7 881 aa20.62■□□□□ 0.89
PSMC2-206ENST00000640277 ADRA2BP18089 450 aa20.53■□□□□ 0.88
PSMC2-206ENST00000640277 DNAJC5BQ9UF47 199 aa20.05■□□□□ 0.8
PSMC2-206ENST00000640277 RB1CC1Q8TDY2 1594 aa19.85■□□□□ 0.77
PSMC2-206ENST00000640277 NACADO15069 1562 aa19.65■□□□□ 0.74
PSMC2-206ENST00000640277 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
PSMC2-206ENST00000640277 DCAF8L2P0C7V8 631 aa19.34■□□□□ 0.69
PSMC2-206ENST00000640277 MYO15BQ96JP2 1530 aa19.34■□□□□ 0.69
PSMC2-206ENST00000640277 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
PSMC2-206ENST00000640277 UNC13AQ9UPW8 1703 aa19.22■□□□□ 0.67
PSMC2-206ENST00000640277 SHROOM4Q9ULL8 1493 aa19.11■□□□□ 0.65
PSMC2-206ENST00000640277 MAPK8IP2Q13387 824 aaPredicted RBP18.99■□□□□ 0.63
PSMC2-206ENST00000640277 CECR2Q9BXF3 1484 aa18.98■□□□□ 0.63
PSMC2-206ENST00000640277 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
PSMC2-206ENST00000640277 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
PSMC2-206ENST00000640277 DCAF1Q9Y4B6 1507 aa18.9■□□□□ 0.62
PSMC2-206ENST00000640277 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
PSMC2-206ENST00000640277 ZCCHC6Q5VYS8 1495 aaKnown RBP18.81■□□□□ 0.6
PSMC2-206ENST00000640277 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
PSMC2-206ENST00000640277 DNAJC5Q9H3Z4 198 aa18.8■□□□□ 0.6
PSMC2-206ENST00000640277 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
PSMC2-206ENST00000640277 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
PSMC2-206ENST00000640277 CUX2O14529 1486 aa18.36■□□□□ 0.53
PSMC2-206ENST00000640277 DCAF8L1A6NGE4 600 aa18.2■□□□□ 0.5
PSMC2-206ENST00000640277 NCAPD3P42695 1498 aa18.17■□□□□ 0.5
PSMC2-206ENST00000640277 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
PSMC2-206ENST00000640277 PPP4R3CPQ6ZMV5 832 aa18.15■□□□□ 0.5
PSMC2-206ENST00000640277 HOXD11P31277 338 aaPredicted RBP18.11■□□□□ 0.49
PSMC2-206ENST00000640277 RNF39Q9H2S5 420 aa18.02■□□□□ 0.47
PSMC2-206ENST00000640277 ATAD2BQ9ULI0 1458 aa18.01■□□□□ 0.47
PSMC2-206ENST00000640277 HMGXB3Q12766 1538 aa17.96■□□□□ 0.47
PSMC2-206ENST00000640277 SMARCA2P51531 1590 aa17.95■□□□□ 0.46
PSMC2-206ENST00000640277 CNKSR2Q8WXI2 1034 aa17.91■□□□□ 0.46
PSMC2-206ENST00000640277 NESP48681 1621 aa17.87■□□□□ 0.45
PSMC2-206ENST00000640277 RNF216Q9NWF9 866 aaPredicted RBP17.85■□□□□ 0.45
PSMC2-206ENST00000640277 SMARCA4P51532 1647 aa17.83■□□□□ 0.45
PSMC2-206ENST00000640277 THOC2Q8NI27 1593 aaKnown RBP17.8■□□□□ 0.44
PSMC2-206ENST00000640277 BAZ1BQ9UIG0 1483 aaKnown RBP17.79■□□□□ 0.44
PSMC2-206ENST00000640277 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
PSMC2-206ENST00000640277 PEG3Q9GZU2 1588 aa17.75■□□□□ 0.43
PSMC2-206ENST00000640277 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
PSMC2-206ENST00000640277 C1QBPQ07021 282 aaKnown RBP17.74■□□□□ 0.43
PSMC2-206ENST00000640277 PDS5BQ9NTI5 1447 aa17.74■□□□□ 0.43
PSMC2-206ENST00000640277 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
PSMC2-206ENST00000640277 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
PSMC2-206ENST00000640277 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.4
PSMC2-206ENST00000640277 MRC2Q9UBG0 1479 aa17.55■□□□□ 0.4
PSMC2-206ENST00000640277 WDR62O43379 1518 aa17.52■□□□□ 0.4
PSMC2-206ENST00000640277 MROH2BQ7Z745 1585 aa17.51■□□□□ 0.39
PSMC2-206ENST00000640277 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
PSMC2-206ENST00000640277 CEP164Q9UPV0 1460 aa17.39■□□□□ 0.37
PSMC2-206ENST00000640277 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
PSMC2-206ENST00000640277 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
PSMC2-206ENST00000640277 CFTRP13569 1480 aa17.29■□□□□ 0.36
PSMC2-206ENST00000640277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.25■□□□□ 0.354e-7■□□□□ 9.3
PSMC2-206ENST00000640277 WIZO95785 1651 aa17.22■□□□□ 0.35
PSMC2-206ENST00000640277 URB2Q14146 1524 aaKnown RBP17.19■□□□□ 0.34
PSMC2-206ENST00000640277 RIMBP3CA6NJZ7 1639 aa17.14■□□□□ 0.33
PSMC2-206ENST00000640277 RIMBP3BA6NNM3 1639 aa17.14■□□□□ 0.33
PSMC2-206ENST00000640277 RIMBP3Q9UFD9 1639 aa17.14■□□□□ 0.33
PSMC2-206ENST00000640277 IFT140Q96RY7 1462 aa17.1■□□□□ 0.33
PSMC2-206ENST00000640277 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
PSMC2-206ENST00000640277 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
PSMC2-206ENST00000640277 RSF1Q96T23 1441 aaPredicted RBP17.06■□□□□ 0.32
PSMC2-206ENST00000640277 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
PSMC2-206ENST00000640277 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.32
PSMC2-206ENST00000640277 CYB5RLQ6IPT4 315 aa17■□□□□ 0.31
PSMC2-206ENST00000640277 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
PSMC2-206ENST00000640277 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
PSMC2-206ENST00000640277 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
PSMC2-206ENST00000640277 TRHP20396 242 aaPredicted RBP16.92■□□□□ 0.3
PSMC2-206ENST00000640277 EIF4G3O43432 1585 aaKnown RBP16.9■□□□□ 0.3
PSMC2-206ENST00000640277 ARAP1Q96P48 1450 aa16.89■□□□□ 0.29
PSMC2-206ENST00000640277 CCDC88BA6NC98 1476 aa16.88■□□□□ 0.29
PSMC2-206ENST00000640277 DNMBPQ6XZF7 1577 aa16.85■□□□□ 0.29
PSMC2-206ENST00000640277 AQRO60306 1485 aaKnown RBP eCLIP16.84■□□□□ 0.295e-7■■■■■ 27.7
PSMC2-206ENST00000640277 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
PSMC2-206ENST00000640277 TARBP1Q13395 1621 aaKnown RBP16.81■□□□□ 0.28
PSMC2-206ENST00000640277 FBLN2P98095 1184 aa16.8■□□□□ 0.28
PSMC2-206ENST00000640277 CHD1O14646 1710 aa16.78■□□□□ 0.28
PSMC2-206ENST00000640277 POLA1P09884 1462 aaPredicted RBP16.75■□□□□ 0.27
PSMC2-206ENST00000640277 DSG3P32926 999 aa16.72■□□□□ 0.27
PSMC2-206ENST00000640277 WDR97A6NE52 1622 aa16.71■□□□□ 0.27
PSMC2-206ENST00000640277 CAPN15O75808 1086 aa16.71■□□□□ 0.27
PSMC2-206ENST00000640277 SPINK5Q9NQ38 1064 aaPredicted RBP16.71■□□□□ 0.27
PSMC2-206ENST00000640277 SOGA1O94964 1423 aa16.7■□□□□ 0.26
PSMC2-206ENST00000640277 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
PSMC2-206ENST00000640277 TDRD9Q8NDG6 1382 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms