RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 NISCHQ9Y2I1 1504 aa33.32■■■□□ 2.92
SNRPA-209ENST00000601253 CCDC180Q9P1Z9 1646 aa29.56■■■□□ 2.32
SNRPA-209ENST00000601253 ABCC9O60706 1549 aa28.75■■■□□ 2.19
SNRPA-209ENST00000601253 NACADO15069 1562 aa27.79■■■□□ 2.04
SNRPA-209ENST00000601253 ZCCHC6Q5VYS8 1495 aaKnown RBP27.79■■■□□ 2.04
SNRPA-209ENST00000601253 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
SNRPA-209ENST00000601253 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
SNRPA-209ENST00000601253 MYO15BQ96JP2 1530 aa27.71■■■□□ 2.03
SNRPA-209ENST00000601253 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
SNRPA-209ENST00000601253 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
SNRPA-209ENST00000601253 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
SNRPA-209ENST00000601253 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
SNRPA-209ENST00000601253 PABPN1Q86U42 306 aaKnown RBP eCLIP26.88■■□□□ 1.893e-10■■■□□ 15.3
SNRPA-209ENST00000601253 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
SNRPA-209ENST00000601253 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
SNRPA-209ENST00000601253 EIF4G1Q04637 1599 aaKnown RBP26.19■■□□□ 1.78
SNRPA-209ENST00000601253 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
SNRPA-209ENST00000601253 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
SNRPA-209ENST00000601253 BAZ1AQ9NRL2 1556 aaPredicted RBP25.83■■□□□ 1.73
SNRPA-209ENST00000601253 SMARCA4P51532 1647 aa25.81■■□□□ 1.72
SNRPA-209ENST00000601253 ATAD2BQ9ULI0 1458 aa25.65■■□□□ 1.7
SNRPA-209ENST00000601253 SMARCA2P51531 1590 aa25.65■■□□□ 1.7
SNRPA-209ENST00000601253 MROH2BQ7Z745 1585 aa25.65■■□□□ 1.7
SNRPA-209ENST00000601253 NCAPD3P42695 1498 aa25.64■■□□□ 1.69
SNRPA-209ENST00000601253 PEG3Q9GZU2 1588 aa25.59■■□□□ 1.69
SNRPA-209ENST00000601253 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
SNRPA-209ENST00000601253 BAZ1BQ9UIG0 1483 aaKnown RBP25.45■■□□□ 1.66
SNRPA-209ENST00000601253 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
SNRPA-209ENST00000601253 WIZO95785 1651 aa25.34■■□□□ 1.65
SNRPA-209ENST00000601253 TOP2AP11388 1531 aaKnown RBP25.15■■□□□ 1.62
SNRPA-209ENST00000601253 LAMC3Q9Y6N6 1575 aa24.93■■□□□ 1.58
SNRPA-209ENST00000601253 NESP48681 1621 aa24.9■■□□□ 1.58
SNRPA-209ENST00000601253 CADPSQ9ULU8 1353 aa24.89■■□□□ 1.57
SNRPA-209ENST00000601253 CCDC88BA6NC98 1476 aa24.83■■□□□ 1.57
SNRPA-209ENST00000601253 SUPT5HO00267 1087 aaKnown RBP24.83■■□□□ 1.57
SNRPA-209ENST00000601253 ERCC6Q03468 1493 aa24.81■■□□□ 1.56
SNRPA-209ENST00000601253 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
SNRPA-209ENST00000601253 CFTRP13569 1480 aa24.77■■□□□ 1.56
SNRPA-209ENST00000601253 KIF21AQ7Z4S6 1674 aa24.6■■□□□ 1.53
SNRPA-209ENST00000601253 FANCD2Q9BXW9 1451 aa24.59■■□□□ 1.53
SNRPA-209ENST00000601253 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
SNRPA-209ENST00000601253 CUX2O14529 1486 aa24.53■■□□□ 1.52
SNRPA-209ENST00000601253 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
SNRPA-209ENST00000601253 THOC2Q8NI27 1593 aaKnown RBP24.52■■□□□ 1.52
SNRPA-209ENST00000601253 MRC2Q9UBG0 1479 aa24.5■■□□□ 1.51
SNRPA-209ENST00000601253 WDR62O43379 1518 aa24.4■■□□□ 1.5
SNRPA-209ENST00000601253 URB2Q14146 1524 aaKnown RBP24.32■■□□□ 1.48
SNRPA-209ENST00000601253 ABCC8Q09428 1581 aa24.27■■□□□ 1.48
SNRPA-209ENST00000601253 TOPBP1Q92547 1522 aa24.2■■□□□ 1.47
SNRPA-209ENST00000601253 DNMBPQ6XZF7 1577 aa24.2■■□□□ 1.46
SNRPA-209ENST00000601253 CUX1P39880 1505 aa24.06■■□□□ 1.44
SNRPA-209ENST00000601253 IFT140Q96RY7 1462 aa24.06■■□□□ 1.44
SNRPA-209ENST00000601253 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
SNRPA-209ENST00000601253 WRNQ14191 1432 aaPredicted RBP eCLIP23.99■■□□□ 1.43
SNRPA-209ENST00000601253 FGD5Q6ZNL6 1462 aa23.96■■□□□ 1.43
SNRPA-209ENST00000601253 TARBP1Q13395 1621 aaKnown RBP23.92■■□□□ 1.42
SNRPA-209ENST00000601253 SOGA1O94964 1423 aa23.92■■□□□ 1.42
SNRPA-209ENST00000601253 TOP2BQ02880 1626 aa23.91■■□□□ 1.42
SNRPA-209ENST00000601253 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.42
SNRPA-209ENST00000601253 ZNF608Q9ULD9 1512 aaPredicted RBP23.88■■□□□ 1.41
SNRPA-209ENST00000601253 SYNJ1O43426 1573 aa23.87■■□□□ 1.41
SNRPA-209ENST00000601253 RAD54L2Q9Y4B4 1467 aa23.87■■□□□ 1.41
SNRPA-209ENST00000601253 WDR97A6NE52 1622 aa23.81■■□□□ 1.4
SNRPA-209ENST00000601253 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
SNRPA-209ENST00000601253 ABCA10Q8WWZ4 1543 aa23.76■■□□□ 1.39
SNRPA-209ENST00000601253 AQRO60306 1485 aaKnown RBP eCLIP23.75■■□□□ 1.398e-7■■■■■ 34.2
SNRPA-209ENST00000601253 TDRD9Q8NDG6 1382 aaKnown RBP23.75■■□□□ 1.39
SNRPA-209ENST00000601253 GAPVD1Q14C86 1478 aa23.65■■□□□ 1.38
SNRPA-209ENST00000601253 GRIN2BQ13224 1484 aa23.64■■□□□ 1.38
SNRPA-209ENST00000601253 ABCA5Q8WWZ7 1642 aa23.63■■□□□ 1.37
SNRPA-209ENST00000601253 DNAJC5Q9H3Z4 198 aa23.59■■□□□ 1.37
SNRPA-209ENST00000601253 MAGI1Q96QZ7 1491 aaPredicted RBP23.58■■□□□ 1.37
SNRPA-209ENST00000601253 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
SNRPA-209ENST00000601253 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
SNRPA-209ENST00000601253 OSCARQ8IYS5 282 aa23.52■■□□□ 1.36
SNRPA-209ENST00000601253 ERICH3Q5RHP9 1530 aa23.49■■□□□ 1.35
SNRPA-209ENST00000601253 TRIM41Q8WV44 630 aa23.49■■□□□ 1.35
SNRPA-209ENST00000601253 KIF27Q86VH2 1401 aa23.49■■□□□ 1.35
SNRPA-209ENST00000601253 SYNJ2O15056 1496 aa23.48■■□□□ 1.35
SNRPA-209ENST00000601253 FBLN2P98095 1184 aa23.44■■□□□ 1.34
SNRPA-209ENST00000601253 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
SNRPA-209ENST00000601253 CHD1O14646 1710 aa23.43■■□□□ 1.34
SNRPA-209ENST00000601253 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
SNRPA-209ENST00000601253 ADAMTS12P58397 1594 aa23.4■■□□□ 1.34
SNRPA-209ENST00000601253 IGF1RP08069 1367 aa23.35■■□□□ 1.33
SNRPA-209ENST00000601253 GRIN2AQ12879 1464 aa23.33■■□□□ 1.33
SNRPA-209ENST00000601253 CUL7Q14999 1698 aa23.29■■□□□ 1.32
SNRPA-209ENST00000601253 CHIC1Q5VXU3 224 aa23.27■■□□□ 1.32
SNRPA-209ENST00000601253 CLASP1Q7Z460 1538 aa23.24■■□□□ 1.31
SNRPA-209ENST00000601253 NUP160Q12769 1436 aa23.24■■□□□ 1.31
SNRPA-209ENST00000601253 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
SNRPA-209ENST00000601253 CARMIL1Q5VZK9 1371 aa23.22■■□□□ 1.31
SNRPA-209ENST00000601253 CEP170Q5SW79 1584 aa23.17■■□□□ 1.3
SNRPA-209ENST00000601253 EEA1Q15075 1411 aa23.16■■□□□ 1.3
SNRPA-209ENST00000601253 ARHGEF11O15085 1522 aa23.12■■□□□ 1.29
SNRPA-209ENST00000601253 RAPGEF2Q9Y4G8 1499 aa23.11■■□□□ 1.29
SNRPA-209ENST00000601253 RIMBP3CA6NJZ7 1639 aa23.08■■□□□ 1.29
SNRPA-209ENST00000601253 RIMBP3BA6NNM3 1639 aa23.08■■□□□ 1.29
SNRPA-209ENST00000601253 RIMBP3Q9UFD9 1639 aa23.08■■□□□ 1.29
SNRPA-209ENST00000601253 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms