RNA–Protein interactions for RNA: ENST00000216455.8

PSMA3-201, Transcript of proteasome subunit alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA3, Length 970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-201ENST00000216455 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
PSMA3-201ENST00000216455 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
PSMA3-201ENST00000216455 PHF23Q9BUL5 403 aaPredicted RBP24.55■■□□□ 1.52
PSMA3-201ENST00000216455 SENP3Q9H4L4 574 aaPredicted RBP24.14■■□□□ 1.45
PSMA3-201ENST00000216455 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
PSMA3-201ENST00000216455 FOXD1Q16676 465 aa22.41■■□□□ 1.18
PSMA3-201ENST00000216455 ADRA2BP18089 450 aa21.68■■□□□ 1.06
PSMA3-201ENST00000216455 PPP6R1Q9UPN7 881 aa21.65■■□□□ 1.06
PSMA3-201ENST00000216455 PIAS4Q8N2W9 510 aaPredicted RBP21.21■□□□□ 0.99
PSMA3-201ENST00000216455 POTEDQ86YR6 584 aa20.9■□□□□ 0.94
PSMA3-201ENST00000216455 MSH5O43196 834 aa20.6■□□□□ 0.89
PSMA3-201ENST00000216455 PPP4R3CPQ6ZMV5 832 aa20.03■□□□□ 0.8
PSMA3-201ENST00000216455 SCAF1Q9H7N4 1312 aaKnown RBP19.77■□□□□ 0.76
PSMA3-201ENST00000216455 KCNA4P22459 653 aa19.71■□□□□ 0.75
PSMA3-201ENST00000216455 MAPK8IP2Q13387 824 aaPredicted RBP19.64■□□□□ 0.73
PSMA3-201ENST00000216455 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
PSMA3-201ENST00000216455 CNKSR2Q8WXI2 1034 aa19.42■□□□□ 0.7
PSMA3-201ENST00000216455 DMRT2Q9Y5R5 561 aa19.27■□□□□ 0.68
PSMA3-201ENST00000216455 NPM3O75607 178 aaKnown RBP19.25■□□□□ 0.67
PSMA3-201ENST00000216455 RNF216Q9NWF9 866 aaPredicted RBP19■□□□□ 0.63
PSMA3-201ENST00000216455 HOXD11P31277 338 aaPredicted RBP18.88■□□□□ 0.61
PSMA3-201ENST00000216455 SLC4A1APQ9BWU0 796 aaKnown RBP18.78■□□□□ 0.6
PSMA3-201ENST00000216455 DCAF8L1A6NGE4 600 aa18.59■□□□□ 0.57
PSMA3-201ENST00000216455 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
PSMA3-201ENST00000216455 EHMT2Q96KQ7 1210 aa18.45■□□□□ 0.54
PSMA3-201ENST00000216455 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
PSMA3-201ENST00000216455 ZBTB22O15209 634 aa18.13■□□□□ 0.49
PSMA3-201ENST00000216455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
PSMA3-201ENST00000216455 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.48
PSMA3-201ENST00000216455 FOXD4L1Q9NU39 408 aa18.07■□□□□ 0.48
PSMA3-201ENST00000216455 U3KPZ7 1027 aaPredicted RBP17.78■□□□□ 0.44
PSMA3-201ENST00000216455 MYCNP04198 464 aaPredicted RBP17.77■□□□□ 0.44
PSMA3-201ENST00000216455 RNF39Q9H2S5 420 aa17.66■□□□□ 0.42
PSMA3-201ENST00000216455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
PSMA3-201ENST00000216455 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
PSMA3-201ENST00000216455 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
PSMA3-201ENST00000216455 SAMD1Q6SPF0 538 aaPredicted RBP17.5■□□□□ 0.39
PSMA3-201ENST00000216455 C1QBPQ07021 282 aaKnown RBP17.44■□□□□ 0.38
PSMA3-201ENST00000216455 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
PSMA3-201ENST00000216455 APLP2Q06481 763 aa17.34■□□□□ 0.37
PSMA3-201ENST00000216455 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
PSMA3-201ENST00000216455 SPINK5Q9NQ38 1064 aaPredicted RBP17.29■□□□□ 0.36
PSMA3-201ENST00000216455 CAPN15O75808 1086 aa17.25■□□□□ 0.35
PSMA3-201ENST00000216455 TRHP20396 242 aaPredicted RBP17.2■□□□□ 0.34
PSMA3-201ENST00000216455 ZNF219Q9P2Y4 722 aaPredicted RBP17.11■□□□□ 0.33
PSMA3-201ENST00000216455 ABCB7O75027 752 aa16.95■□□□□ 0.3
PSMA3-201ENST00000216455 POLA2Q14181 598 aa16.9■□□□□ 0.3
PSMA3-201ENST00000216455 DSG3P32926 999 aa16.85■□□□□ 0.29
PSMA3-201ENST00000216455 FBLN2P98095 1184 aa16.59■□□□□ 0.25
PSMA3-201ENST00000216455 MKRN4PQ13434 485 aaPredicted RBP16.56■□□□□ 0.24
PSMA3-201ENST00000216455 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
PSMA3-201ENST00000216455 FKBP8Q14318 412 aa16.4■□□□□ 0.22
PSMA3-201ENST00000216455 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
PSMA3-201ENST00000216455 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
PSMA3-201ENST00000216455 POTEHQ6S545 545 aa16.16■□□□□ 0.18
PSMA3-201ENST00000216455 ZNF692Q9BU19 519 aaPredicted RBP16.14■□□□□ 0.17
PSMA3-201ENST00000216455 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
PSMA3-201ENST00000216455 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
PSMA3-201ENST00000216455 SPDYE2Q495Y8 402 aa16.13■□□□□ 0.17
PSMA3-201ENST00000216455 RBM42Q9BTD8 480 aaKnown RBP16.05■□□□□ 0.16
PSMA3-201ENST00000216455 SSUH2Q9Y2M2 353 aa16■□□□□ 0.15
PSMA3-201ENST00000216455 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
PSMA3-201ENST00000216455 PROM2Q8N271 834 aa15.9■□□□□ 0.14
PSMA3-201ENST00000216455 AKT1S1Q96B36 256 aa15.86■□□□□ 0.13
PSMA3-201ENST00000216455 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
PSMA3-201ENST00000216455 FBXO3Q9UK99 471 aa15.73■□□□□ 0.11
PSMA3-201ENST00000216455 CLEC11AQ9Y240 323 aa15.67■□□□□ 0.1
PSMA3-201ENST00000216455 SPDYE1Q8NFV5 336 aaPredicted RBP15.66■□□□□ 0.1
PSMA3-201ENST00000216455 STAG3Q9UJ98 1225 aa15.62■□□□□ 0.09
PSMA3-201ENST00000216455 PITPNM1O00562 1244 aa15.59■□□□□ 0.09
PSMA3-201ENST00000216455 VASPP50552 380 aaPredicted RBP15.54■□□□□ 0.08
PSMA3-201ENST00000216455 PRR29P0C7W0 189 aa15.48■□□□□ 0.07
PSMA3-201ENST00000216455 MIER1Q8N108 512 aa15.44■□□□□ 0.06
PSMA3-201ENST00000216455 PLCD3Q8N3E9 789 aa15.44■□□□□ 0.06
PSMA3-201ENST00000216455 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
PSMA3-201ENST00000216455 PLEKHG5O94827 1062 aa15.33■□□□□ 0.04
PSMA3-201ENST00000216455 IFNLR1Q8IU57 520 aaPredicted RBP15.33■□□□□ 0.04
PSMA3-201ENST00000216455 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
PSMA3-201ENST00000216455 CREBZFQ9NS37 354 aa15.28■□□□□ 0.04
PSMA3-201ENST00000216455 CHADLQ6NUI6 762 aa15.26■□□□□ 0.03
PSMA3-201ENST00000216455 PRKAR2AP13861 404 aaKnown RBP15.21■□□□□ 0.03
PSMA3-201ENST00000216455 FXR2P51116 673 aaKnown RBP eCLIP15.21■□□□□ 0.03
PSMA3-201ENST00000216455 PIP4P2Q8N4L2 257 aa15.2■□□□□ 0.02
PSMA3-201ENST00000216455 ZBTB47Q9UFB7 747 aaPredicted RBP15.19■□□□□ 0.02
PSMA3-201ENST00000216455 SPOCK2Q92563 424 aa15.13■□□□□ 0.01
PSMA3-201ENST00000216455 MNX1P50219 401 aaPredicted RBP15.1■□□□□ 0.01
PSMA3-201ENST00000216455 RTN4Q9NQC3 1192 aaKnown RBP15.07■□□□□ 0
PSMA3-201ENST00000216455 FARP1Q9Y4F1 1045 aaPredicted RBP15.07■□□□□ 0
PSMA3-201ENST00000216455 AMER1Q5JTC6 1135 aaPredicted RBP15.05■□□□□ -0
PSMA3-201ENST00000216455 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
PSMA3-201ENST00000216455 NUBP1P53384 320 aa14.97□□□□□ -0.01
PSMA3-201ENST00000216455 CIZ1Q9ULV3 898 aaPredicted RBP14.95□□□□□ -0.02
PSMA3-201ENST00000216455 RASEFQ8IZ41 740 aa14.93□□□□□ -0.02
PSMA3-201ENST00000216455 DCAF8Q5TAQ9 597 aa14.9□□□□□ -0.02
PSMA3-201ENST00000216455 FAM212AQ96EL1 285 aa14.88□□□□□ -0.03
PSMA3-201ENST00000216455 TSPYL2Q9H2G4 693 aaPredicted RBP14.86□□□□□ -0.03
PSMA3-201ENST00000216455 PKD2Q13563 968 aa14.84□□□□□ -0.03
PSMA3-201ENST00000216455 GSE1Q14687 1217 aa14.84□□□□□ -0.03
PSMA3-201ENST00000216455 PAK3O75914 559 aaPredicted RBP14.79□□□□□ -0.04
PSMA3-201ENST00000216455 NISCHQ9Y2I1 1504 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms