RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 NISCHQ9Y2I1 1504 aa22.63■■□□□ 1.21
TUBB-208ENST00000396389 CCDC180Q9P1Z9 1646 aa19.6■□□□□ 0.73
TUBB-208ENST00000396389 DCAF8L2P0C7V8 631 aa19.47■□□□□ 0.71
TUBB-208ENST00000396389 ABCC9O60706 1549 aa19.4■□□□□ 0.7
TUBB-208ENST00000396389 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
TUBB-208ENST00000396389 SHROOM4Q9ULL8 1493 aa18.82■□□□□ 0.6
TUBB-208ENST00000396389 NACADO15069 1562 aa18.45■□□□□ 0.54
TUBB-208ENST00000396389 RB1CC1Q8TDY2 1594 aa18.44■□□□□ 0.54
TUBB-208ENST00000396389 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
TUBB-208ENST00000396389 PABPN1Q86U42 306 aaKnown RBP eCLIP18.42■□□□□ 0.54
TUBB-208ENST00000396389 SCRIBQ14160 1630 aa18.41■□□□□ 0.54
TUBB-208ENST00000396389 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
TUBB-208ENST00000396389 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
TUBB-208ENST00000396389 SUPT5HO00267 1087 aaKnown RBP17.95■□□□□ 0.46
TUBB-208ENST00000396389 BICRAQ9NZM4 1560 aa17.93■□□□□ 0.46
TUBB-208ENST00000396389 CECR2Q9BXF3 1484 aa17.82■□□□□ 0.44
TUBB-208ENST00000396389 MROH2BQ7Z745 1585 aa17.59■□□□□ 0.41
TUBB-208ENST00000396389 RSF1Q96T23 1441 aaPredicted RBP17.55■□□□□ 0.4
TUBB-208ENST00000396389 DNAJC5BQ9UF47 199 aa17.53■□□□□ 0.4
TUBB-208ENST00000396389 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
TUBB-208ENST00000396389 BAZ1AQ9NRL2 1556 aaPredicted RBP17.46■□□□□ 0.39
TUBB-208ENST00000396389 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
TUBB-208ENST00000396389 WIZO95785 1651 aa17.42■□□□□ 0.38
TUBB-208ENST00000396389 CC2D2AQ9P2K1 1620 aa17.33■□□□□ 0.36
TUBB-208ENST00000396389 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
TUBB-208ENST00000396389 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
TUBB-208ENST00000396389 SMARCA2P51531 1590 aa17.17■□□□□ 0.34
TUBB-208ENST00000396389 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
TUBB-208ENST00000396389 HRCP23327 699 aa17.08■□□□□ 0.33
TUBB-208ENST00000396389 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
TUBB-208ENST00000396389 CCDC88BA6NC98 1476 aa17.06■□□□□ 0.32
TUBB-208ENST00000396389 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
TUBB-208ENST00000396389 PPARGC1BQ86YN6 1023 aaKnown RBP17.01■□□□□ 0.31
TUBB-208ENST00000396389 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
TUBB-208ENST00000396389 PCGF6Q9BYE7 350 aa16.93■□□□□ 0.3
TUBB-208ENST00000396389 NESP48681 1621 aa16.91■□□□□ 0.3
TUBB-208ENST00000396389 CADPSQ9ULU8 1353 aa16.79■□□□□ 0.28
TUBB-208ENST00000396389 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
TUBB-208ENST00000396389 TRIM41Q8WV44 630 aa16.73■□□□□ 0.27
TUBB-208ENST00000396389 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
TUBB-208ENST00000396389 CFTRP13569 1480 aa16.7■□□□□ 0.26
TUBB-208ENST00000396389 EHMT2Q96KQ7 1210 aa16.69■□□□□ 0.26
TUBB-208ENST00000396389 FAM9AQ8IZU1 332 aaPredicted RBP16.68■□□□□ 0.26
TUBB-208ENST00000396389 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
TUBB-208ENST00000396389 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
TUBB-208ENST00000396389 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
TUBB-208ENST00000396389 WRNQ14191 1432 aaPredicted RBP eCLIP16.54■□□□□ 0.24
TUBB-208ENST00000396389 LAMC3Q9Y6N6 1575 aa16.54■□□□□ 0.24
TUBB-208ENST00000396389 CEP164Q9UPV0 1460 aa16.51■□□□□ 0.23
TUBB-208ENST00000396389 KIF21AQ7Z4S6 1674 aa16.48■□□□□ 0.23
TUBB-208ENST00000396389 SYNJ1O43426 1573 aa16.45■□□□□ 0.22
TUBB-208ENST00000396389 CUX1P39880 1505 aa16.44■□□□□ 0.22
TUBB-208ENST00000396389 LOC105371045A0A1W2PR82 267 aa16.43■□□□□ 0.22
TUBB-208ENST00000396389 URB2Q14146 1524 aaKnown RBP16.42■□□□□ 0.22
TUBB-208ENST00000396389 RAD54L2Q9Y4B4 1467 aa16.38■□□□□ 0.21
TUBB-208ENST00000396389 SOGA1O94964 1423 aa16.37■□□□□ 0.21
TUBB-208ENST00000396389 TOPBP1Q92547 1522 aa16.36■□□□□ 0.21
TUBB-208ENST00000396389 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
TUBB-208ENST00000396389 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
TUBB-208ENST00000396389 MRC2Q9UBG0 1479 aa16.34■□□□□ 0.21
TUBB-208ENST00000396389 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
TUBB-208ENST00000396389 PRDM2Q13029 1718 aa16.3■□□□□ 0.2
TUBB-208ENST00000396389 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
TUBB-208ENST00000396389 PELP1Q8IZL8 1130 aaKnown RBP16.29■□□□□ 0.2
TUBB-208ENST00000396389 RANGAP1P46060 587 aaPredicted RBP16.28■□□□□ 0.2
TUBB-208ENST00000396389 TOP2BQ02880 1626 aa16.28■□□□□ 0.2
TUBB-208ENST00000396389 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.2
TUBB-208ENST00000396389 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.19
TUBB-208ENST00000396389 MYT1Q01538 1121 aa16.25■□□□□ 0.19
TUBB-208ENST00000396389 CUX2O14529 1486 aa16.24■□□□□ 0.19
TUBB-208ENST00000396389 AQRO60306 1485 aaKnown RBP eCLIP16.22■□□□□ 0.192e-10■■■■■ 54
TUBB-208ENST00000396389 THOC2Q8NI27 1593 aaKnown RBP16.21■□□□□ 0.19
TUBB-208ENST00000396389 FBLN2P98095 1184 aa16.21■□□□□ 0.18
TUBB-208ENST00000396389 ZNF608Q9ULD9 1512 aaPredicted RBP16.21■□□□□ 0.18
TUBB-208ENST00000396389 WDR62O43379 1518 aa16.18■□□□□ 0.18
TUBB-208ENST00000396389 BIVM-ERCC5R4GMW8 1640 aa16.18■□□□□ 0.18
TUBB-208ENST00000396389 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
TUBB-208ENST00000396389 TRIM26Q12899 539 aaPredicted RBP16.17■□□□□ 0.18
TUBB-208ENST00000396389 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
TUBB-208ENST00000396389 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
TUBB-208ENST00000396389 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
TUBB-208ENST00000396389 IGF1RP08069 1367 aa16.06■□□□□ 0.16
TUBB-208ENST00000396389 GAPVD1Q14C86 1478 aa16.06■□□□□ 0.16
TUBB-208ENST00000396389 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
TUBB-208ENST00000396389 TARBP1Q13395 1621 aaKnown RBP16.04■□□□□ 0.16
TUBB-208ENST00000396389 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
TUBB-208ENST00000396389 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
TUBB-208ENST00000396389 CARMIL1Q5VZK9 1371 aa16■□□□□ 0.15
TUBB-208ENST00000396389 RAPGEF2Q9Y4G8 1499 aa15.99■□□□□ 0.15
TUBB-208ENST00000396389 EIF4G3O43432 1585 aaKnown RBP15.96■□□□□ 0.15
TUBB-208ENST00000396389 SLC24A1O60721 1099 aa15.96■□□□□ 0.15
TUBB-208ENST00000396389 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.15
TUBB-208ENST00000396389 P3H3Q8IVL6 736 aa15.94■□□□□ 0.14
TUBB-208ENST00000396389 GRIN2BQ13224 1484 aa15.93■□□□□ 0.14
TUBB-208ENST00000396389 EEA1Q15075 1411 aa15.92■□□□□ 0.14
TUBB-208ENST00000396389 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
TUBB-208ENST00000396389 ABCA5Q8WWZ7 1642 aa15.9■□□□□ 0.14
TUBB-208ENST00000396389 ZEB1P37275 1124 aaPredicted RBP15.9■□□□□ 0.14
TUBB-208ENST00000396389 PRXQ9BXM0 1461 aa15.86■□□□□ 0.13
TUBB-208ENST00000396389 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms