RNA–Protein interactions for RNA: ENST00000421744.5

BUD23-203, Transcript of BUD23, rRNA methyltransferase and ribosome maturation factor, humanhuman

TSL 2

Gene BUD23, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BUD23-203ENST00000421744 NISCHQ9Y2I1 1504 aa46.15■■■■■ 4.98
BUD23-203ENST00000421744 CCDC180Q9P1Z9 1646 aa41.11■■■■■ 4.17
BUD23-203ENST00000421744 ABCC9O60706 1549 aa40.56■■■■■ 4.08
BUD23-203ENST00000421744 RB1CC1Q8TDY2 1594 aa38.87■■■■□ 3.81
BUD23-203ENST00000421744 NACADO15069 1562 aa38.76■■■■□ 3.8
BUD23-203ENST00000421744 DCAF8L2P0C7V8 631 aa38.72■■■■□ 3.79
BUD23-203ENST00000421744 MYO15BQ96JP2 1530 aa38.45■■■■□ 3.75
BUD23-203ENST00000421744 ZCCHC6Q5VYS8 1495 aaKnown RBP38.37■■■■□ 3.73
BUD23-203ENST00000421744 DCAF1Q9Y4B6 1507 aa38.17■■■■□ 3.7
BUD23-203ENST00000421744 UNC13AQ9UPW8 1703 aa37.92■■■■□ 3.66
BUD23-203ENST00000421744 PABPN1Q86U42 306 aaKnown RBP eCLIP37.88■■■■□ 3.65
BUD23-203ENST00000421744 BICRAQ9NZM4 1560 aa37.7■■■■□ 3.63
BUD23-203ENST00000421744 DNAJC5BQ9UF47 199 aa37.54■■■■□ 3.6
BUD23-203ENST00000421744 SCRIBQ14160 1630 aa37.5■■■■□ 3.59
BUD23-203ENST00000421744 SHROOM4Q9ULL8 1493 aa37.29■■■■□ 3.56
BUD23-203ENST00000421744 EIF4G1Q04637 1599 aaKnown RBP36.74■■■■□ 3.47
BUD23-203ENST00000421744 CC2D2AQ9P2K1 1620 aa36.65■■■■□ 3.46
BUD23-203ENST00000421744 CECR2Q9BXF3 1484 aa36.48■■■■□ 3.43
BUD23-203ENST00000421744 SMARCA4P51532 1647 aa35.84■■■■□ 3.33
BUD23-203ENST00000421744 NCAPD3P42695 1498 aa35.8■■■■□ 3.32
BUD23-203ENST00000421744 BAZ1AQ9NRL2 1556 aaPredicted RBP35.78■■■■□ 3.32
BUD23-203ENST00000421744 ATAD2BQ9ULI0 1458 aa35.77■■■■□ 3.32
BUD23-203ENST00000421744 SMARCA2P51531 1590 aa35.68■■■■□ 3.3
BUD23-203ENST00000421744 MROH2BQ7Z745 1585 aa35.56■■■■□ 3.28
BUD23-203ENST00000421744 HMGXB3Q12766 1538 aa35.56■■■■□ 3.28
BUD23-203ENST00000421744 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.28
BUD23-203ENST00000421744 BAZ1BQ9UIG0 1483 aaKnown RBP35.43■■■■□ 3.26
BUD23-203ENST00000421744 WIZO95785 1651 aa35.14■■■■□ 3.22
BUD23-203ENST00000421744 RSF1Q96T23 1441 aaPredicted RBP35.07■■■■□ 3.21
BUD23-203ENST00000421744 NESP48681 1621 aa35■■■■□ 3.19
BUD23-203ENST00000421744 ERCC6Q03468 1493 aa34.97■■■■□ 3.19
BUD23-203ENST00000421744 LAMC3Q9Y6N6 1575 aa34.87■■■■□ 3.17
BUD23-203ENST00000421744 TOP2AP11388 1531 aaKnown RBP34.76■■■■□ 3.15
BUD23-203ENST00000421744 CADPSQ9ULU8 1353 aa34.74■■■■□ 3.15
BUD23-203ENST00000421744 CUX2O14529 1486 aa34.71■■■■□ 3.15
BUD23-203ENST00000421744 PDS5BQ9NTI5 1447 aa34.68■■■■□ 3.14
BUD23-203ENST00000421744 KIF21AQ7Z4S6 1674 aa34.54■■■■□ 3.12
BUD23-203ENST00000421744 THOC2Q8NI27 1593 aaKnown RBP34.5■■■■□ 3.11
BUD23-203ENST00000421744 CFTRP13569 1480 aa34.46■■■■□ 3.11
BUD23-203ENST00000421744 CCDC88BA6NC98 1476 aa34.38■■■■□ 3.09
BUD23-203ENST00000421744 FANCD2Q9BXW9 1451 aa34.33■■■■□ 3.09
BUD23-203ENST00000421744 MRC2Q9UBG0 1479 aa34.32■■■■□ 3.08
BUD23-203ENST00000421744 CEP164Q9UPV0 1460 aa34.3■■■■□ 3.08
BUD23-203ENST00000421744 WDR62O43379 1518 aa34.2■■■■□ 3.06
BUD23-203ENST00000421744 PRDM2Q13029 1718 aa34.08■■■■□ 3.05
BUD23-203ENST00000421744 DNAJC5Q9H3Z4 198 aa34.05■■■■□ 3.04
BUD23-203ENST00000421744 URB2Q14146 1524 aaKnown RBP33.99■■■■□ 3.03
BUD23-203ENST00000421744 SUPT5HO00267 1087 aaKnown RBP33.98■■■■□ 3.03
BUD23-203ENST00000421744 TOPBP1Q92547 1522 aa33.74■■■□□ 2.99
BUD23-203ENST00000421744 ABCC8Q09428 1581 aa33.73■■■□□ 2.99
BUD23-203ENST00000421744 DNMBPQ6XZF7 1577 aa33.66■■■□□ 2.98
BUD23-203ENST00000421744 IFT140Q96RY7 1462 aa33.61■■■□□ 2.97
BUD23-203ENST00000421744 ZNF608Q9ULD9 1512 aaPredicted RBP33.48■■■□□ 2.95
BUD23-203ENST00000421744 POLA1P09884 1462 aaPredicted RBP33.44■■■□□ 2.94
BUD23-203ENST00000421744 TARBP1Q13395 1621 aaKnown RBP33.38■■■□□ 2.93
BUD23-203ENST00000421744 CUX1P39880 1505 aa33.37■■■□□ 2.93
BUD23-203ENST00000421744 SOGA1O94964 1423 aa33.31■■■□□ 2.92
BUD23-203ENST00000421744 FGD5Q6ZNL6 1462 aa33.31■■■□□ 2.92
BUD23-203ENST00000421744 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
BUD23-203ENST00000421744 EIF4G3O43432 1585 aaKnown RBP33.3■■■□□ 2.92
BUD23-203ENST00000421744 OSCARQ8IYS5 282 aa33.27■■■□□ 2.92
BUD23-203ENST00000421744 AQRO60306 1485 aaKnown RBP eCLIP33.26■■■□□ 2.922e-7■■■■■ 31.1
BUD23-203ENST00000421744 TDRD9Q8NDG6 1382 aaKnown RBP33.17■■■□□ 2.9
BUD23-203ENST00000421744 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
BUD23-203ENST00000421744 WRNQ14191 1432 aaPredicted RBP eCLIP33.07■■■□□ 2.88
BUD23-203ENST00000421744 TOP2BQ02880 1626 aa33■■■□□ 2.87
BUD23-203ENST00000421744 ABCA10Q8WWZ4 1543 aa32.98■■■□□ 2.87
BUD23-203ENST00000421744 BIVM-ERCC5R4GMW8 1640 aa32.98■■■□□ 2.87
BUD23-203ENST00000421744 SYNJ1O43426 1573 aa32.97■■■□□ 2.87
BUD23-203ENST00000421744 GRIN2BQ13224 1484 aa32.95■■■□□ 2.87
BUD23-203ENST00000421744 FBLN2P98095 1184 aa32.94■■■□□ 2.86
BUD23-203ENST00000421744 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
BUD23-203ENST00000421744 GAPVD1Q14C86 1478 aa32.91■■■□□ 2.86
BUD23-203ENST00000421744 CHD1O14646 1710 aa32.91■■■□□ 2.86
BUD23-203ENST00000421744 MAGI1Q96QZ7 1491 aaPredicted RBP32.88■■■□□ 2.85
BUD23-203ENST00000421744 ABCA5Q8WWZ7 1642 aa32.84■■■□□ 2.85
BUD23-203ENST00000421744 CHMP7Q8WUX9 453 aaPredicted RBP32.81■■■□□ 2.84
BUD23-203ENST00000421744 PBRM1Q86U86 1689 aa32.79■■■□□ 2.84
BUD23-203ENST00000421744 TRIM41Q8WV44 630 aa32.77■■■□□ 2.84
BUD23-203ENST00000421744 SYNJ2O15056 1496 aa32.76■■■□□ 2.84
BUD23-203ENST00000421744 RIMBP3CA6NJZ7 1639 aa32.7■■■□□ 2.83
BUD23-203ENST00000421744 RIMBP3BA6NNM3 1639 aa32.7■■■□□ 2.83
BUD23-203ENST00000421744 RIMBP3Q9UFD9 1639 aa32.7■■■□□ 2.83
BUD23-203ENST00000421744 ARHGEF11O15085 1522 aa32.68■■■□□ 2.82
BUD23-203ENST00000421744 CLASP1Q7Z460 1538 aa32.59■■■□□ 2.81
BUD23-203ENST00000421744 ERICH3Q5RHP9 1530 aa32.57■■■□□ 2.8
BUD23-203ENST00000421744 ADAMTS12P58397 1594 aa32.54■■■□□ 2.8
BUD23-203ENST00000421744 FHAD1B1AJZ9 1412 aa32.53■■■□□ 2.8
BUD23-203ENST00000421744 GRIN2AQ12879 1464 aa32.51■■■□□ 2.79
BUD23-203ENST00000421744 CYB5RLQ6IPT4 315 aa32.44■■■□□ 2.78
BUD23-203ENST00000421744 KIF27Q86VH2 1401 aa32.41■■■□□ 2.78
BUD23-203ENST00000421744 ARAP1Q96P48 1450 aa32.41■■■□□ 2.78
BUD23-203ENST00000421744 NUP160Q12769 1436 aa32.39■■■□□ 2.78
BUD23-203ENST00000421744 CEP170Q5SW79 1584 aa32.35■■■□□ 2.77
BUD23-203ENST00000421744 IGF1RP08069 1367 aa32.33■■■□□ 2.77
BUD23-203ENST00000421744 CUL7Q14999 1698 aa32.19■■■□□ 2.74
BUD23-203ENST00000421744 SHROOM2Q13796 1616 aa32.15■■■□□ 2.74
BUD23-203ENST00000421744 ERCC6L2Q5T890 1561 aa32.12■■■□□ 2.73
BUD23-203ENST00000421744 CARMIL1Q5VZK9 1371 aa32.12■■■□□ 2.73
BUD23-203ENST00000421744 JPH4Q96JJ6 628 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 267.7 ms