RNA–Protein interactions for RNA: ENST00000598923.1

SNRPA-205, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-205ENST00000598923 NISCHQ9Y2I1 1504 aa45.86■■■■■ 4.93
SNRPA-205ENST00000598923 CCDC180Q9P1Z9 1646 aa41.14■■■■■ 4.18
SNRPA-205ENST00000598923 ABCC9O60706 1549 aa40.87■■■■■ 4.13
SNRPA-205ENST00000598923 RB1CC1Q8TDY2 1594 aa39.03■■■■□ 3.84
SNRPA-205ENST00000598923 NACADO15069 1562 aa38.81■■■■□ 3.8
SNRPA-205ENST00000598923 DCAF8L2P0C7V8 631 aa38.48■■■■□ 3.75
SNRPA-205ENST00000598923 MYO15BQ96JP2 1530 aa38.36■■■■□ 3.73
SNRPA-205ENST00000598923 UNC13AQ9UPW8 1703 aa38.25■■■■□ 3.71
SNRPA-205ENST00000598923 DNAJC5BQ9UF47 199 aa38.2■■■■□ 3.71
SNRPA-205ENST00000598923 ZCCHC6Q5VYS8 1495 aaKnown RBP38.04■■■■□ 3.68
SNRPA-205ENST00000598923 PABPN1Q86U42 306 aaKnown RBP eCLIP38.03■■■■□ 3.683e-10■■■□□ 15.3
SNRPA-205ENST00000598923 DCAF1Q9Y4B6 1507 aa37.93■■■■□ 3.66
SNRPA-205ENST00000598923 BICRAQ9NZM4 1560 aa37.93■■■■□ 3.66
SNRPA-205ENST00000598923 SCRIBQ14160 1630 aa37.42■■■■□ 3.58
SNRPA-205ENST00000598923 SHROOM4Q9ULL8 1493 aa37.41■■■■□ 3.58
SNRPA-205ENST00000598923 CC2D2AQ9P2K1 1620 aa36.99■■■■□ 3.51
SNRPA-205ENST00000598923 EIF4G1Q04637 1599 aaKnown RBP36.94■■■■□ 3.5
SNRPA-205ENST00000598923 CECR2Q9BXF3 1484 aa36.8■■■■□ 3.48
SNRPA-205ENST00000598923 NCAPD3P42695 1498 aa35.81■■■■□ 3.32
SNRPA-205ENST00000598923 SMARCA4P51532 1647 aa35.75■■■■□ 3.31
SNRPA-205ENST00000598923 ATAD2BQ9ULI0 1458 aa35.72■■■■□ 3.31
SNRPA-205ENST00000598923 SMARCA2P51531 1590 aa35.63■■■■□ 3.29
SNRPA-205ENST00000598923 HMGXB3Q12766 1538 aa35.58■■■■□ 3.29
SNRPA-205ENST00000598923 BAZ1AQ9NRL2 1556 aaPredicted RBP35.58■■■■□ 3.29
SNRPA-205ENST00000598923 PEG3Q9GZU2 1588 aa35.44■■■■□ 3.26
SNRPA-205ENST00000598923 BAZ1BQ9UIG0 1483 aaKnown RBP35.35■■■■□ 3.25
SNRPA-205ENST00000598923 MROH2BQ7Z745 1585 aa35.33■■■■□ 3.25
SNRPA-205ENST00000598923 ERCC6Q03468 1493 aa35.24■■■■□ 3.23
SNRPA-205ENST00000598923 CUX2O14529 1486 aa35.18■■■■□ 3.22
SNRPA-205ENST00000598923 NESP48681 1621 aa35.17■■■■□ 3.22
SNRPA-205ENST00000598923 LAMC3Q9Y6N6 1575 aa35■■■■□ 3.19
SNRPA-205ENST00000598923 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.19
SNRPA-205ENST00000598923 WIZO95785 1651 aa34.94■■■■□ 3.18
SNRPA-205ENST00000598923 THOC2Q8NI27 1593 aaKnown RBP34.84■■■■□ 3.17
SNRPA-205ENST00000598923 KIF21AQ7Z4S6 1674 aa34.79■■■■□ 3.16
SNRPA-205ENST00000598923 PDS5BQ9NTI5 1447 aa34.72■■■■□ 3.15
SNRPA-205ENST00000598923 CADPSQ9ULU8 1353 aa34.7■■■■□ 3.15
SNRPA-205ENST00000598923 RSF1Q96T23 1441 aaPredicted RBP34.64■■■■□ 3.14
SNRPA-205ENST00000598923 TOP2AP11388 1531 aaKnown RBP34.49■■■■□ 3.11
SNRPA-205ENST00000598923 MRC2Q9UBG0 1479 aa34.44■■■■□ 3.1
SNRPA-205ENST00000598923 WDR62O43379 1518 aa34.38■■■■□ 3.09
SNRPA-205ENST00000598923 CFTRP13569 1480 aa34.37■■■■□ 3.09
SNRPA-205ENST00000598923 CEP164Q9UPV0 1460 aa34.33■■■■□ 3.09
SNRPA-205ENST00000598923 FANCD2Q9BXW9 1451 aa34.31■■■■□ 3.08
SNRPA-205ENST00000598923 PRDM2Q13029 1718 aa34.15■■■■□ 3.06
SNRPA-205ENST00000598923 CCDC88BA6NC98 1476 aa34.08■■■■□ 3.05
SNRPA-205ENST00000598923 URB2Q14146 1524 aaKnown RBP34.04■■■■□ 3.04
SNRPA-205ENST00000598923 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
SNRPA-205ENST00000598923 IFT140Q96RY7 1462 aa33.64■■■□□ 2.98
SNRPA-205ENST00000598923 ABCC8Q09428 1581 aa33.64■■■□□ 2.98
SNRPA-205ENST00000598923 DNMBPQ6XZF7 1577 aa33.6■■■□□ 2.97
SNRPA-205ENST00000598923 ZNF608Q9ULD9 1512 aaPredicted RBP33.58■■■□□ 2.97
SNRPA-205ENST00000598923 SUPT5HO00267 1087 aaKnown RBP33.55■■■□□ 2.96
SNRPA-205ENST00000598923 OSCARQ8IYS5 282 aa33.55■■■□□ 2.96
SNRPA-205ENST00000598923 EIF4G3O43432 1585 aaKnown RBP33.43■■■□□ 2.94
SNRPA-205ENST00000598923 TARBP1Q13395 1621 aaKnown RBP33.43■■■□□ 2.94
SNRPA-205ENST00000598923 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
SNRPA-205ENST00000598923 POLA1P09884 1462 aaPredicted RBP33.36■■■□□ 2.93
SNRPA-205ENST00000598923 AQRO60306 1485 aaKnown RBP eCLIP33.27■■■□□ 2.921e-6■■■■■ 29
SNRPA-205ENST00000598923 RAD54L2Q9Y4B4 1467 aa33.21■■■□□ 2.91
SNRPA-205ENST00000598923 CUX1P39880 1505 aa33.19■■■□□ 2.9
SNRPA-205ENST00000598923 CHD1O14646 1710 aa33.19■■■□□ 2.9
SNRPA-205ENST00000598923 SOGA1O94964 1423 aa33.18■■■□□ 2.9
SNRPA-205ENST00000598923 RIMBP3CA6NJZ7 1639 aa33.17■■■□□ 2.9
SNRPA-205ENST00000598923 RIMBP3BA6NNM3 1639 aa33.17■■■□□ 2.9
SNRPA-205ENST00000598923 RIMBP3Q9UFD9 1639 aa33.17■■■□□ 2.9
SNRPA-205ENST00000598923 FGD5Q6ZNL6 1462 aa33.17■■■□□ 2.9
SNRPA-205ENST00000598923 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
SNRPA-205ENST00000598923 TDRD9Q8NDG6 1382 aaKnown RBP33.08■■■□□ 2.89
SNRPA-205ENST00000598923 ARHGEF11O15085 1522 aa33.07■■■□□ 2.88
SNRPA-205ENST00000598923 SNAPC4Q5SXM2 1469 aa32.94■■■□□ 2.86
SNRPA-205ENST00000598923 FBLN2P98095 1184 aa32.94■■■□□ 2.86
SNRPA-205ENST00000598923 GRIN2BQ13224 1484 aa32.89■■■□□ 2.86
SNRPA-205ENST00000598923 MAGI1Q96QZ7 1491 aaPredicted RBP32.89■■■□□ 2.86
SNRPA-205ENST00000598923 PBRM1Q86U86 1689 aa32.85■■■□□ 2.85
SNRPA-205ENST00000598923 ABCA10Q8WWZ4 1543 aa32.82■■■□□ 2.85
SNRPA-205ENST00000598923 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
SNRPA-205ENST00000598923 CLASP1Q7Z460 1538 aa32.79■■■□□ 2.84
SNRPA-205ENST00000598923 ABCA5Q8WWZ7 1642 aa32.79■■■□□ 2.84
SNRPA-205ENST00000598923 SYNJ2O15056 1496 aa32.77■■■□□ 2.84
SNRPA-205ENST00000598923 CHMP7Q8WUX9 453 aaPredicted RBP32.76■■■□□ 2.83
SNRPA-205ENST00000598923 ARAP1Q96P48 1450 aa32.75■■■□□ 2.83
SNRPA-205ENST00000598923 BIVM-ERCC5R4GMW8 1640 aa32.75■■■□□ 2.83
SNRPA-205ENST00000598923 SYNJ1O43426 1573 aa32.75■■■□□ 2.83
SNRPA-205ENST00000598923 CYB5RLQ6IPT4 315 aa32.73■■■□□ 2.83
SNRPA-205ENST00000598923 TOP2BQ02880 1626 aa32.72■■■□□ 2.83
SNRPA-205ENST00000598923 WRNQ14191 1432 aaPredicted RBP eCLIP32.68■■■□□ 2.82
SNRPA-205ENST00000598923 ADAMTS12P58397 1594 aa32.5■■■□□ 2.79
SNRPA-205ENST00000598923 GRIN2AQ12879 1464 aa32.48■■■□□ 2.79
SNRPA-205ENST00000598923 ERICH3Q5RHP9 1530 aa32.42■■■□□ 2.78
SNRPA-205ENST00000598923 FHAD1B1AJZ9 1412 aa32.38■■■□□ 2.77
SNRPA-205ENST00000598923 CEP170Q5SW79 1584 aa32.37■■■□□ 2.77
SNRPA-205ENST00000598923 NUP160Q12769 1436 aa32.37■■■□□ 2.77
SNRPA-205ENST00000598923 TRHP20396 242 aaPredicted RBP32.28■■■□□ 2.76
SNRPA-205ENST00000598923 ERCC6L2Q5T890 1561 aa32.27■■■□□ 2.76
SNRPA-205ENST00000598923 SHROOM2Q13796 1616 aa32.26■■■□□ 2.76
SNRPA-205ENST00000598923 RUSC2Q8N2Y8 1516 aa32.05■■■□□ 2.72
SNRPA-205ENST00000598923 KIF27Q86VH2 1401 aa32.01■■■□□ 2.72
SNRPA-205ENST00000598923 IGF1RP08069 1367 aa32.01■■■□□ 2.71
SNRPA-205ENST00000598923 PRG4Q92954 1404 aaPredicted RBP32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms