RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 NISCHQ9Y2I1 1504 aa22.95■■□□□ 1.26
PCCB-213ENST00000475214 ABCC9O60706 1549 aa20.35■□□□□ 0.85
PCCB-213ENST00000475214 CCDC180Q9P1Z9 1646 aa20.28■□□□□ 0.84
PCCB-213ENST00000475214 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
PCCB-213ENST00000475214 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
PCCB-213ENST00000475214 ZCCHC6Q5VYS8 1495 aaKnown RBP19.27■□□□□ 0.67
PCCB-213ENST00000475214 NACADO15069 1562 aa19.19■□□□□ 0.66
PCCB-213ENST00000475214 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
PCCB-213ENST00000475214 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
PCCB-213ENST00000475214 MYO15BQ96JP2 1530 aa18.98■□□□□ 0.63
PCCB-213ENST00000475214 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.61
PCCB-213ENST00000475214 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
PCCB-213ENST00000475214 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
PCCB-213ENST00000475214 SHROOM4Q9ULL8 1493 aa18.73■□□□□ 0.59
PCCB-213ENST00000475214 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
PCCB-213ENST00000475214 CC2D2AQ9P2K1 1620 aa18.39■□□□□ 0.53
PCCB-213ENST00000475214 CECR2Q9BXF3 1484 aa18.36■□□□□ 0.53
PCCB-213ENST00000475214 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
PCCB-213ENST00000475214 SUPT5HO00267 1087 aaKnown RBP18.07■□□□□ 0.48
PCCB-213ENST00000475214 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
PCCB-213ENST00000475214 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
PCCB-213ENST00000475214 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
PCCB-213ENST00000475214 MROH2BQ7Z745 1585 aa17.71■□□□□ 0.43
PCCB-213ENST00000475214 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
PCCB-213ENST00000475214 CUX2O14529 1486 aa17.65■□□□□ 0.42
PCCB-213ENST00000475214 SMARCA4P51532 1647 aa17.64■□□□□ 0.41
PCCB-213ENST00000475214 SMARCA2P51531 1590 aa17.63■□□□□ 0.41
PCCB-213ENST00000475214 ATAD2BQ9ULI0 1458 aa17.63■□□□□ 0.41
PCCB-213ENST00000475214 ERCC6Q03468 1493 aa17.58■□□□□ 0.41
PCCB-213ENST00000475214 WIZO95785 1651 aa17.58■□□□□ 0.4
PCCB-213ENST00000475214 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
PCCB-213ENST00000475214 BAZ1BQ9UIG0 1483 aaKnown RBP17.49■□□□□ 0.39
PCCB-213ENST00000475214 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
PCCB-213ENST00000475214 NESP48681 1621 aa17.43■□□□□ 0.38
PCCB-213ENST00000475214 TOP2AP11388 1531 aaKnown RBP17.42■□□□□ 0.38
PCCB-213ENST00000475214 THOC2Q8NI27 1593 aaKnown RBP17.32■□□□□ 0.36
PCCB-213ENST00000475214 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
PCCB-213ENST00000475214 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
PCCB-213ENST00000475214 PDS5BQ9NTI5 1447 aa17.23■□□□□ 0.35
PCCB-213ENST00000475214 CCDC88BA6NC98 1476 aa17.23■□□□□ 0.35
PCCB-213ENST00000475214 KIF21AQ7Z4S6 1674 aa17.21■□□□□ 0.35
PCCB-213ENST00000475214 CADPSQ9ULU8 1353 aa17.17■□□□□ 0.34
PCCB-213ENST00000475214 MRC2Q9UBG0 1479 aa17.06■□□□□ 0.32
PCCB-213ENST00000475214 WDR62O43379 1518 aa17.04■□□□□ 0.32
PCCB-213ENST00000475214 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
PCCB-213ENST00000475214 CFTRP13569 1480 aa16.99■□□□□ 0.31
PCCB-213ENST00000475214 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
PCCB-213ENST00000475214 FANCD2Q9BXW9 1451 aa16.95■□□□□ 0.3
PCCB-213ENST00000475214 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
PCCB-213ENST00000475214 URB2Q14146 1524 aaKnown RBP16.79■□□□□ 0.28
PCCB-213ENST00000475214 WRNQ14191 1432 aaPredicted RBP eCLIP16.79■□□□□ 0.28
PCCB-213ENST00000475214 OSCARQ8IYS5 282 aa16.78■□□□□ 0.28
PCCB-213ENST00000475214 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
PCCB-213ENST00000475214 FAM9AQ8IZU1 332 aaPredicted RBP16.68■□□□□ 0.26
PCCB-213ENST00000475214 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
PCCB-213ENST00000475214 IFT140Q96RY7 1462 aa16.66■□□□□ 0.26
PCCB-213ENST00000475214 TOP2BQ02880 1626 aa16.63■□□□□ 0.25
PCCB-213ENST00000475214 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
PCCB-213ENST00000475214 LOC105371045A0A1W2PR82 267 aa16.62■□□□□ 0.25
PCCB-213ENST00000475214 BIVM-ERCC5R4GMW8 1640 aa16.62■□□□□ 0.25
PCCB-213ENST00000475214 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
PCCB-213ENST00000475214 RIMBP3CA6NJZ7 1639 aa16.6■□□□□ 0.25
PCCB-213ENST00000475214 RIMBP3BA6NNM3 1639 aa16.6■□□□□ 0.25
PCCB-213ENST00000475214 RIMBP3Q9UFD9 1639 aa16.6■□□□□ 0.25
PCCB-213ENST00000475214 EEA1Q15075 1411 aa16.6■□□□□ 0.25
PCCB-213ENST00000475214 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
PCCB-213ENST00000475214 CUX1P39880 1505 aa16.56■□□□□ 0.24
PCCB-213ENST00000475214 SOGA1O94964 1423 aa16.55■□□□□ 0.24
PCCB-213ENST00000475214 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
PCCB-213ENST00000475214 EIF4G3O43432 1585 aaKnown RBP16.51■□□□□ 0.23
PCCB-213ENST00000475214 CSRNP3Q8WYN3 585 aa16.49■□□□□ 0.23
PCCB-213ENST00000475214 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
PCCB-213ENST00000475214 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
PCCB-213ENST00000475214 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
PCCB-213ENST00000475214 CHD1O14646 1710 aa16.43■□□□□ 0.22
PCCB-213ENST00000475214 AQRO60306 1485 aaKnown RBP eCLIP16.42■□□□□ 0.223e-6■■■■□ 21.1
PCCB-213ENST00000475214 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
PCCB-213ENST00000475214 WDR97A6NE52 1622 aa16.39■□□□□ 0.21
PCCB-213ENST00000475214 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
PCCB-213ENST00000475214 FGD5Q6ZNL6 1462 aa16.39■□□□□ 0.21
PCCB-213ENST00000475214 KIF27Q86VH2 1401 aa16.37■□□□□ 0.21
PCCB-213ENST00000475214 RAD54L2Q9Y4B4 1467 aa16.36■□□□□ 0.21
PCCB-213ENST00000475214 FBLN2P98095 1184 aa16.36■□□□□ 0.21
PCCB-213ENST00000475214 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
PCCB-213ENST00000475214 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
PCCB-213ENST00000475214 GOLGA3Q08378 1498 aa16.35■□□□□ 0.21
PCCB-213ENST00000475214 KIF21BO75037 1637 aa16.34■□□□□ 0.21
PCCB-213ENST00000475214 TNIKQ9UKE5 1360 aa16.3■□□□□ 0.2
PCCB-213ENST00000475214 UBTFP17480 764 aaKnown RBP16.3■□□□□ 0.2
PCCB-213ENST00000475214 CHMP7Q8WUX9 453 aaPredicted RBP16.29■□□□□ 0.2
PCCB-213ENST00000475214 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
PCCB-213ENST00000475214 MAGI1Q96QZ7 1491 aaPredicted RBP16.29■□□□□ 0.2
PCCB-213ENST00000475214 SNAPC4Q5SXM2 1469 aa16.27■□□□□ 0.19
PCCB-213ENST00000475214 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
PCCB-213ENST00000475214 CLASP1Q7Z460 1538 aa16.25■□□□□ 0.19
PCCB-213ENST00000475214 ABCA10Q8WWZ4 1543 aa16.25■□□□□ 0.19
PCCB-213ENST00000475214 ERICH3Q5RHP9 1530 aa16.24■□□□□ 0.19
PCCB-213ENST00000475214 PRXQ9BXM0 1461 aa16.23■□□□□ 0.19
PCCB-213ENST00000475214 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
PCCB-213ENST00000475214 RAPGEF2Q9Y4G8 1499 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms