RNA–Protein interactions for RNA: ENST00000564993.1

PKM-213, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 663 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-213ENST00000564993 NISCHQ9Y2I1 1504 aa27.4■■□□□ 1.98
PKM-213ENST00000564993 CCDC180Q9P1Z9 1646 aa24.4■■□□□ 1.5
PKM-213ENST00000564993 ABCC9O60706 1549 aa23.46■■□□□ 1.35
PKM-213ENST00000564993 NACADO15069 1562 aa22.87■■□□□ 1.25
PKM-213ENST00000564993 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
PKM-213ENST00000564993 MYO15BQ96JP2 1530 aa22.84■■□□□ 1.25
PKM-213ENST00000564993 RB1CC1Q8TDY2 1594 aa22.83■■□□□ 1.25
PKM-213ENST00000564993 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
PKM-213ENST00000564993 DCAF8L2P0C7V8 631 aa22.63■■□□□ 1.21
PKM-213ENST00000564993 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
PKM-213ENST00000564993 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
PKM-213ENST00000564993 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
PKM-213ENST00000564993 SHROOM4Q9ULL8 1493 aa22.02■■□□□ 1.12
PKM-213ENST00000564993 PABPN1Q86U42 306 aaKnown RBP eCLIP21.88■■□□□ 1.09
PKM-213ENST00000564993 DNAJC5BQ9UF47 199 aa21.53■■□□□ 1.04
PKM-213ENST00000564993 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
PKM-213ENST00000564993 CC2D2AQ9P2K1 1620 aa21.32■■□□□ 1
PKM-213ENST00000564993 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■□□□□ 0.99
PKM-213ENST00000564993 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
PKM-213ENST00000564993 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
PKM-213ENST00000564993 SMARCA2P51531 1590 aa21.1■□□□□ 0.97
PKM-213ENST00000564993 PEG3Q9GZU2 1588 aa21.09■□□□□ 0.97
PKM-213ENST00000564993 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
PKM-213ENST00000564993 MROH2BQ7Z745 1585 aa21.04■□□□□ 0.96
PKM-213ENST00000564993 ATAD2BQ9ULI0 1458 aa21.03■□□□□ 0.96
PKM-213ENST00000564993 HMGXB3Q12766 1538 aa21■□□□□ 0.95
PKM-213ENST00000564993 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
PKM-213ENST00000564993 RSF1Q96T23 1441 aaPredicted RBP20.88■□□□□ 0.93
PKM-213ENST00000564993 WIZO95785 1651 aa20.85■□□□□ 0.93
PKM-213ENST00000564993 TOP2AP11388 1531 aaKnown RBP20.7■□□□□ 0.9
PKM-213ENST00000564993 LAMC3Q9Y6N6 1575 aa20.51■□□□□ 0.87
PKM-213ENST00000564993 CADPSQ9ULU8 1353 aa20.41■□□□□ 0.86
PKM-213ENST00000564993 CCDC88BA6NC98 1476 aa20.38■□□□□ 0.85
PKM-213ENST00000564993 SUPT5HO00267 1087 aaKnown RBP20.37■□□□□ 0.85
PKM-213ENST00000564993 CFTRP13569 1480 aa20.34■□□□□ 0.85
PKM-213ENST00000564993 NESP48681 1621 aa20.34■□□□□ 0.85
PKM-213ENST00000564993 PRDM2Q13029 1718 aa20.33■□□□□ 0.85
PKM-213ENST00000564993 PDS5BQ9NTI5 1447 aa20.33■□□□□ 0.84
PKM-213ENST00000564993 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
PKM-213ENST00000564993 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
PKM-213ENST00000564993 FANCD2Q9BXW9 1451 aa20.16■□□□□ 0.82
PKM-213ENST00000564993 CEP164Q9UPV0 1460 aa20.14■□□□□ 0.81
PKM-213ENST00000564993 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
PKM-213ENST00000564993 CUX2O14529 1486 aa20.08■□□□□ 0.81
PKM-213ENST00000564993 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
PKM-213ENST00000564993 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
PKM-213ENST00000564993 WDR62O43379 1518 aa20.03■□□□□ 0.8
PKM-213ENST00000564993 ABCC8Q09428 1581 aa20■□□□□ 0.79
PKM-213ENST00000564993 URB2Q14146 1524 aaKnown RBP19.91■□□□□ 0.78
PKM-213ENST00000564993 DNMBPQ6XZF7 1577 aa19.9■□□□□ 0.78
PKM-213ENST00000564993 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
PKM-213ENST00000564993 CUX1P39880 1505 aa19.75■□□□□ 0.75
PKM-213ENST00000564993 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
PKM-213ENST00000564993 BIVM-ERCC5R4GMW8 1640 aa19.73■□□□□ 0.75
PKM-213ENST00000564993 WRNQ14191 1432 aaPredicted RBP eCLIP19.72■□□□□ 0.75
PKM-213ENST00000564993 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
PKM-213ENST00000564993 POLA1P09884 1462 aaPredicted RBP19.69■□□□□ 0.74
PKM-213ENST00000564993 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
PKM-213ENST00000564993 WDR97A6NE52 1622 aa19.66■□□□□ 0.74
PKM-213ENST00000564993 TARBP1Q13395 1621 aaKnown RBP19.65■□□□□ 0.74
PKM-213ENST00000564993 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
PKM-213ENST00000564993 SOGA1O94964 1423 aa19.61■□□□□ 0.73
PKM-213ENST00000564993 ABCA10Q8WWZ4 1543 aa19.54■□□□□ 0.72
PKM-213ENST00000564993 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
PKM-213ENST00000564993 EIF4G3O43432 1585 aaKnown RBP19.53■□□□□ 0.72
PKM-213ENST00000564993 ZNF608Q9ULD9 1512 aaPredicted RBP19.51■□□□□ 0.71
PKM-213ENST00000564993 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
PKM-213ENST00000564993 AQRO60306 1485 aaKnown RBP eCLIP19.42■□□□□ 0.73e-7■■■■■ 30.7
PKM-213ENST00000564993 GAPVD1Q14C86 1478 aa19.41■□□□□ 0.7
PKM-213ENST00000564993 PBRM1Q86U86 1689 aa19.41■□□□□ 0.7
PKM-213ENST00000564993 TDRD9Q8NDG6 1382 aaKnown RBP19.41■□□□□ 0.7
PKM-213ENST00000564993 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
PKM-213ENST00000564993 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
PKM-213ENST00000564993 ERICH3Q5RHP9 1530 aa19.35■□□□□ 0.69
PKM-213ENST00000564993 TRIM41Q8WV44 630 aa19.33■□□□□ 0.68
PKM-213ENST00000564993 KIF27Q86VH2 1401 aa19.33■□□□□ 0.68
PKM-213ENST00000564993 SNAPC4Q5SXM2 1469 aa19.29■□□□□ 0.68
PKM-213ENST00000564993 CHD1O14646 1710 aa19.26■□□□□ 0.67
PKM-213ENST00000564993 SYNJ2O15056 1496 aa19.26■□□□□ 0.67
PKM-213ENST00000564993 ADAMTS12P58397 1594 aa19.24■□□□□ 0.67
PKM-213ENST00000564993 CUL7Q14999 1698 aa19.23■□□□□ 0.67
PKM-213ENST00000564993 FHAD1B1AJZ9 1412 aa19.21■□□□□ 0.67
PKM-213ENST00000564993 OSCARQ8IYS5 282 aa19.21■□□□□ 0.67
PKM-213ENST00000564993 CHMP7Q8WUX9 453 aaPredicted RBP19.17■□□□□ 0.66
PKM-213ENST00000564993 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
PKM-213ENST00000564993 IGF1RP08069 1367 aa19.16■□□□□ 0.66
PKM-213ENST00000564993 EEA1Q15075 1411 aa19.15■□□□□ 0.66
PKM-213ENST00000564993 GRIN2AQ12879 1464 aa19.15■□□□□ 0.66
PKM-213ENST00000564993 FBLN2P98095 1184 aa19.12■□□□□ 0.65
PKM-213ENST00000564993 CARMIL1Q5VZK9 1371 aa19.06■□□□□ 0.64
PKM-213ENST00000564993 NUP160Q12769 1436 aa19.06■□□□□ 0.64
PKM-213ENST00000564993 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
PKM-213ENST00000564993 RUSC2Q8N2Y8 1516 aa19.05■□□□□ 0.64
PKM-213ENST00000564993 RAPGEF2Q9Y4G8 1499 aa19.01■□□□□ 0.63
PKM-213ENST00000564993 CEP170Q5SW79 1584 aa19.01■□□□□ 0.63
PKM-213ENST00000564993 PRXQ9BXM0 1461 aa18.97■□□□□ 0.63
PKM-213ENST00000564993 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
PKM-213ENST00000564993 SHROOM2Q13796 1616 aa18.93■□□□□ 0.62
PKM-213ENST00000564993 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
PKM-213ENST00000564993 KIF21BO75037 1637 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms