RNA–Protein interactions for RNA: ENST00000553681.5

APEX1-206, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-206ENST00000553681 NISCHQ9Y2I1 1504 aa28.43■■■□□ 2.14
APEX1-206ENST00000553681 ABCC9O60706 1549 aa25.91■■□□□ 1.74
APEX1-206ENST00000553681 CCDC180Q9P1Z9 1646 aa25.5■■□□□ 1.67
APEX1-206ENST00000553681 DNAJC5BQ9UF47 199 aa24.48■■□□□ 1.51
APEX1-206ENST00000553681 RB1CC1Q8TDY2 1594 aa24.39■■□□□ 1.5
APEX1-206ENST00000553681 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
APEX1-206ENST00000553681 PABPN1Q86U42 306 aaKnown RBP eCLIP24.15■■□□□ 1.46
APEX1-206ENST00000553681 NACADO15069 1562 aa24.14■■□□□ 1.45
APEX1-206ENST00000553681 UNC13AQ9UPW8 1703 aa23.99■■□□□ 1.43
APEX1-206ENST00000553681 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
APEX1-206ENST00000553681 MYO15BQ96JP2 1530 aa23.62■■□□□ 1.37
APEX1-206ENST00000553681 ZCCHC6Q5VYS8 1495 aaKnown RBP23.52■■□□□ 1.36
APEX1-206ENST00000553681 SCRIBQ14160 1630 aa23.46■■□□□ 1.35
APEX1-206ENST00000553681 CC2D2AQ9P2K1 1620 aa23.32■■□□□ 1.32
APEX1-206ENST00000553681 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
APEX1-206ENST00000553681 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
APEX1-206ENST00000553681 EIF4G1Q04637 1599 aaKnown RBP23.18■■□□□ 1.3
APEX1-206ENST00000553681 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
APEX1-206ENST00000553681 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
APEX1-206ENST00000553681 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
APEX1-206ENST00000553681 NCAPD3P42695 1498 aa22.29■■□□□ 1.16
APEX1-206ENST00000553681 ATAD2BQ9ULI0 1458 aa22.28■■□□□ 1.16
APEX1-206ENST00000553681 SMARCA4P51532 1647 aa22.24■■□□□ 1.15
APEX1-206ENST00000553681 NESP48681 1621 aa22.24■■□□□ 1.15
APEX1-206ENST00000553681 CUX2O14529 1486 aa22.19■■□□□ 1.14
APEX1-206ENST00000553681 SMARCA2P51531 1590 aa22.15■■□□□ 1.14
APEX1-206ENST00000553681 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
APEX1-206ENST00000553681 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
APEX1-206ENST00000553681 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
APEX1-206ENST00000553681 MROH2BQ7Z745 1585 aa22■■□□□ 1.11
APEX1-206ENST00000553681 THOC2Q8NI27 1593 aaKnown RBP21.93■■□□□ 1.1
APEX1-206ENST00000553681 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
APEX1-206ENST00000553681 PEG3Q9GZU2 1588 aa21.9■■□□□ 1.1
APEX1-206ENST00000553681 LAMC3Q9Y6N6 1575 aa21.83■■□□□ 1.09
APEX1-206ENST00000553681 WIZO95785 1651 aa21.77■■□□□ 1.08
APEX1-206ENST00000553681 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
APEX1-206ENST00000553681 CADPSQ9ULU8 1353 aa21.66■■□□□ 1.06
APEX1-206ENST00000553681 MRC2Q9UBG0 1479 aa21.6■■□□□ 1.05
APEX1-206ENST00000553681 TRIM41Q8WV44 630 aa21.6■■□□□ 1.05
APEX1-206ENST00000553681 WDR62O43379 1518 aa21.53■■□□□ 1.04
APEX1-206ENST00000553681 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
APEX1-206ENST00000553681 FANCD2Q9BXW9 1451 aa21.48■■□□□ 1.03
APEX1-206ENST00000553681 RSF1Q96T23 1441 aaPredicted RBP21.43■■□□□ 1.02
APEX1-206ENST00000553681 CFTRP13569 1480 aa21.37■■□□□ 1.01
APEX1-206ENST00000553681 TOP2AP11388 1531 aaKnown RBP21.36■■□□□ 1.01
APEX1-206ENST00000553681 URB2Q14146 1524 aaKnown RBP21.34■■□□□ 1.01
APEX1-206ENST00000553681 OSCARQ8IYS5 282 aa21.21■□□□□ 0.99
APEX1-206ENST00000553681 CCDC88BA6NC98 1476 aa21.17■□□□□ 0.98
APEX1-206ENST00000553681 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
APEX1-206ENST00000553681 ZNF608Q9ULD9 1512 aaPredicted RBP21.16■□□□□ 0.98
APEX1-206ENST00000553681 TOPBP1Q92547 1522 aa21.05■□□□□ 0.96
APEX1-206ENST00000553681 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
APEX1-206ENST00000553681 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
APEX1-206ENST00000553681 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
APEX1-206ENST00000553681 IFT140Q96RY7 1462 aa21.02■□□□□ 0.96
APEX1-206ENST00000553681 EIF4G3O43432 1585 aaKnown RBP20.98■□□□□ 0.95
APEX1-206ENST00000553681 AQRO60306 1485 aaKnown RBP eCLIP20.94■□□□□ 0.943e-9■■■□□ 17.9
APEX1-206ENST00000553681 ARHGEF11O15085 1522 aa20.93■□□□□ 0.94
APEX1-206ENST00000553681 DNMBPQ6XZF7 1577 aa20.93■□□□□ 0.94
APEX1-206ENST00000553681 CHD1O14646 1710 aa20.9■□□□□ 0.94
APEX1-206ENST00000553681 FBLN2P98095 1184 aa20.89■□□□□ 0.93
APEX1-206ENST00000553681 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
APEX1-206ENST00000553681 CYB5RLQ6IPT4 315 aa20.85■□□□□ 0.93
APEX1-206ENST00000553681 RAD54L2Q9Y4B4 1467 aa20.85■□□□□ 0.93
APEX1-206ENST00000553681 POLA1P09884 1462 aaPredicted RBP20.82■□□□□ 0.92
APEX1-206ENST00000553681 ABCC8Q09428 1581 aa20.82■□□□□ 0.92
APEX1-206ENST00000553681 TDRD9Q8NDG6 1382 aaKnown RBP20.79■□□□□ 0.92
APEX1-206ENST00000553681 ARAP1Q96P48 1450 aa20.74■□□□□ 0.91
APEX1-206ENST00000553681 SOGA1O94964 1423 aa20.72■□□□□ 0.91
APEX1-206ENST00000553681 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
APEX1-206ENST00000553681 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
APEX1-206ENST00000553681 SNAPC4Q5SXM2 1469 aa20.69■□□□□ 0.9
APEX1-206ENST00000553681 CUX1P39880 1505 aa20.67■□□□□ 0.9
APEX1-206ENST00000553681 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
APEX1-206ENST00000553681 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
APEX1-206ENST00000553681 SUPT5HO00267 1087 aaKnown RBP20.55■□□□□ 0.88
APEX1-206ENST00000553681 WDR97A6NE52 1622 aa20.53■□□□□ 0.88
APEX1-206ENST00000553681 GRIN2BQ13224 1484 aa20.52■□□□□ 0.88
APEX1-206ENST00000553681 PBRM1Q86U86 1689 aa20.51■□□□□ 0.87
APEX1-206ENST00000553681 SYNJ1O43426 1573 aa20.51■□□□□ 0.87
APEX1-206ENST00000553681 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
APEX1-206ENST00000553681 SYNJ2O15056 1496 aa20.47■□□□□ 0.87
APEX1-206ENST00000553681 GAPVD1Q14C86 1478 aa20.46■□□□□ 0.87
APEX1-206ENST00000553681 ABCA5Q8WWZ7 1642 aa20.39■□□□□ 0.86
APEX1-206ENST00000553681 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
APEX1-206ENST00000553681 ABCA10Q8WWZ4 1543 aa20.37■□□□□ 0.85
APEX1-206ENST00000553681 GRIN2AQ12879 1464 aa20.29■□□□□ 0.84
APEX1-206ENST00000553681 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
APEX1-206ENST00000553681 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
APEX1-206ENST00000553681 WRNQ14191 1432 aaPredicted RBP eCLIP20.26■□□□□ 0.835e-6■■■■■ 29.2
APEX1-206ENST00000553681 TOP2BQ02880 1626 aa20.22■□□□□ 0.83
APEX1-206ENST00000553681 BIVM-ERCC5R4GMW8 1640 aa20.22■□□□□ 0.83
APEX1-206ENST00000553681 NUP160Q12769 1436 aa20.19■□□□□ 0.82
APEX1-206ENST00000553681 AEBP2Q6ZN18 517 aaPredicted RBP20.17■□□□□ 0.82
APEX1-206ENST00000553681 FHAD1B1AJZ9 1412 aa20.15■□□□□ 0.82
APEX1-206ENST00000553681 SHROOM2Q13796 1616 aa20.12■□□□□ 0.81
APEX1-206ENST00000553681 PRG4Q92954 1404 aaPredicted RBP20.09■□□□□ 0.81
APEX1-206ENST00000553681 ERICH3Q5RHP9 1530 aa20.08■□□□□ 0.81
APEX1-206ENST00000553681 KIF13AQ9H1H9 1805 aa20.03■□□□□ 0.8
APEX1-206ENST00000553681 JPH4Q96JJ6 628 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms