RNA–Protein interactions for RNA: ENST00000599570.5

SNRPA-207, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-207ENST00000599570 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
SNRPA-207ENST00000599570 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
SNRPA-207ENST00000599570 ABCC9O60706 1549 aa28.67■■■□□ 2.18
SNRPA-207ENST00000599570 RB1CC1Q8TDY2 1594 aa27.77■■■□□ 2.04
SNRPA-207ENST00000599570 NACADO15069 1562 aa27.73■■■□□ 2.03
SNRPA-207ENST00000599570 ZCCHC6Q5VYS8 1495 aaKnown RBP27.68■■■□□ 2.02
SNRPA-207ENST00000599570 DCAF8L2P0C7V8 631 aa27.62■■■□□ 2.01
SNRPA-207ENST00000599570 MYO15BQ96JP2 1530 aa27.61■■■□□ 2.01
SNRPA-207ENST00000599570 DCAF1Q9Y4B6 1507 aa27.51■■■□□ 2
SNRPA-207ENST00000599570 UNC13AQ9UPW8 1703 aa27.04■■□□□ 1.92
SNRPA-207ENST00000599570 SCRIBQ14160 1630 aa26.91■■□□□ 1.9
SNRPA-207ENST00000599570 BICRAQ9NZM4 1560 aa26.76■■□□□ 1.87
SNRPA-207ENST00000599570 PABPN1Q86U42 306 aaKnown RBP eCLIP26.73■■□□□ 1.873e-10■■■□□ 15.3
SNRPA-207ENST00000599570 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
SNRPA-207ENST00000599570 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
SNRPA-207ENST00000599570 DNAJC5BQ9UF47 199 aa25.99■■□□□ 1.75
SNRPA-207ENST00000599570 CC2D2AQ9P2K1 1620 aa25.98■■□□□ 1.75
SNRPA-207ENST00000599570 BAZ1AQ9NRL2 1556 aaPredicted RBP25.79■■□□□ 1.72
SNRPA-207ENST00000599570 CECR2Q9BXF3 1484 aa25.79■■□□□ 1.72
SNRPA-207ENST00000599570 SMARCA4P51532 1647 aa25.76■■□□□ 1.71
SNRPA-207ENST00000599570 SMARCA2P51531 1590 aa25.62■■□□□ 1.69
SNRPA-207ENST00000599570 ATAD2BQ9ULI0 1458 aa25.52■■□□□ 1.68
SNRPA-207ENST00000599570 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
SNRPA-207ENST00000599570 NCAPD3P42695 1498 aa25.5■■□□□ 1.67
SNRPA-207ENST00000599570 PEG3Q9GZU2 1588 aa25.5■■□□□ 1.67
SNRPA-207ENST00000599570 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
SNRPA-207ENST00000599570 BAZ1BQ9UIG0 1483 aaKnown RBP25.41■■□□□ 1.66
SNRPA-207ENST00000599570 WIZO95785 1651 aa25.28■■□□□ 1.64
SNRPA-207ENST00000599570 RSF1Q96T23 1441 aaPredicted RBP25.26■■□□□ 1.63
SNRPA-207ENST00000599570 TOP2AP11388 1531 aaKnown RBP25.09■■□□□ 1.61
SNRPA-207ENST00000599570 LAMC3Q9Y6N6 1575 aa24.92■■□□□ 1.58
SNRPA-207ENST00000599570 ERCC6Q03468 1493 aa24.83■■□□□ 1.56
SNRPA-207ENST00000599570 NESP48681 1621 aa24.79■■□□□ 1.56
SNRPA-207ENST00000599570 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
SNRPA-207ENST00000599570 PDS5BQ9NTI5 1447 aa24.73■■□□□ 1.55
SNRPA-207ENST00000599570 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
SNRPA-207ENST00000599570 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
SNRPA-207ENST00000599570 CFTRP13569 1480 aa24.65■■□□□ 1.54
SNRPA-207ENST00000599570 PRDM2Q13029 1718 aa24.63■■□□□ 1.53
SNRPA-207ENST00000599570 KIF21AQ7Z4S6 1674 aa24.62■■□□□ 1.53
SNRPA-207ENST00000599570 CEP164Q9UPV0 1460 aa24.53■■□□□ 1.52
SNRPA-207ENST00000599570 CUX2O14529 1486 aa24.51■■□□□ 1.51
SNRPA-207ENST00000599570 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
SNRPA-207ENST00000599570 THOC2Q8NI27 1593 aaKnown RBP24.5■■□□□ 1.51
SNRPA-207ENST00000599570 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.51
SNRPA-207ENST00000599570 WDR62O43379 1518 aa24.35■■□□□ 1.49
SNRPA-207ENST00000599570 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
SNRPA-207ENST00000599570 URB2Q14146 1524 aaKnown RBP24.21■■□□□ 1.47
SNRPA-207ENST00000599570 DNMBPQ6XZF7 1577 aa24.17■■□□□ 1.46
SNRPA-207ENST00000599570 TOPBP1Q92547 1522 aa24.12■■□□□ 1.45
SNRPA-207ENST00000599570 IFT140Q96RY7 1462 aa24■■□□□ 1.43
SNRPA-207ENST00000599570 CUX1P39880 1505 aa23.95■■□□□ 1.43
SNRPA-207ENST00000599570 POLA1P09884 1462 aaPredicted RBP23.92■■□□□ 1.42
SNRPA-207ENST00000599570 WRNQ14191 1432 aaPredicted RBP eCLIP23.9■■□□□ 1.42
SNRPA-207ENST00000599570 FGD5Q6ZNL6 1462 aa23.89■■□□□ 1.42
SNRPA-207ENST00000599570 BIVM-ERCC5R4GMW8 1640 aa23.86■■□□□ 1.41
SNRPA-207ENST00000599570 TOP2BQ02880 1626 aa23.85■■□□□ 1.41
SNRPA-207ENST00000599570 TARBP1Q13395 1621 aaKnown RBP23.84■■□□□ 1.41
SNRPA-207ENST00000599570 WDR97A6NE52 1622 aa23.82■■□□□ 1.4
SNRPA-207ENST00000599570 SOGA1O94964 1423 aa23.82■■□□□ 1.4
SNRPA-207ENST00000599570 DNAJC5Q9H3Z4 198 aa23.81■■□□□ 1.4
SNRPA-207ENST00000599570 SYNJ1O43426 1573 aa23.8■■□□□ 1.4
SNRPA-207ENST00000599570 EIF4G3O43432 1585 aaKnown RBP23.8■■□□□ 1.4
SNRPA-207ENST00000599570 ZNF608Q9ULD9 1512 aaPredicted RBP23.76■■□□□ 1.39
SNRPA-207ENST00000599570 RAD54L2Q9Y4B4 1467 aa23.75■■□□□ 1.39
SNRPA-207ENST00000599570 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
SNRPA-207ENST00000599570 AQRO60306 1485 aaKnown RBP eCLIP23.64■■□□□ 1.385e-7■■■■■ 41.9
SNRPA-207ENST00000599570 TDRD9Q8NDG6 1382 aaKnown RBP23.62■■□□□ 1.37
SNRPA-207ENST00000599570 ABCA5Q8WWZ7 1642 aa23.59■■□□□ 1.37
SNRPA-207ENST00000599570 PBRM1Q86U86 1689 aa23.59■■□□□ 1.37
SNRPA-207ENST00000599570 GRIN2BQ13224 1484 aa23.58■■□□□ 1.37
SNRPA-207ENST00000599570 GAPVD1Q14C86 1478 aa23.58■■□□□ 1.37
SNRPA-207ENST00000599570 MAGI1Q96QZ7 1491 aaPredicted RBP23.54■■□□□ 1.36
SNRPA-207ENST00000599570 SNAPC4Q5SXM2 1469 aa23.51■■□□□ 1.35
SNRPA-207ENST00000599570 CHD1O14646 1710 aa23.47■■□□□ 1.35
SNRPA-207ENST00000599570 ERICH3Q5RHP9 1530 aa23.45■■□□□ 1.34
SNRPA-207ENST00000599570 OSCARQ8IYS5 282 aa23.44■■□□□ 1.34
SNRPA-207ENST00000599570 KIF27Q86VH2 1401 aa23.42■■□□□ 1.34
SNRPA-207ENST00000599570 SYNJ2O15056 1496 aa23.42■■□□□ 1.34
SNRPA-207ENST00000599570 FBLN2P98095 1184 aa23.4■■□□□ 1.34
SNRPA-207ENST00000599570 TRIM41Q8WV44 630 aa23.39■■□□□ 1.33
SNRPA-207ENST00000599570 ADAMTS12P58397 1594 aa23.39■■□□□ 1.33
SNRPA-207ENST00000599570 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
SNRPA-207ENST00000599570 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.32
SNRPA-207ENST00000599570 CUL7Q14999 1698 aa23.32■■□□□ 1.32
SNRPA-207ENST00000599570 GRIN2AQ12879 1464 aa23.27■■□□□ 1.32
SNRPA-207ENST00000599570 CHIC1Q5VXU3 224 aa23.2■■□□□ 1.3
SNRPA-207ENST00000599570 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
SNRPA-207ENST00000599570 IGF1RP08069 1367 aa23.17■■□□□ 1.3
SNRPA-207ENST00000599570 NUP160Q12769 1436 aa23.13■■□□□ 1.29
SNRPA-207ENST00000599570 CEP170Q5SW79 1584 aa23.11■■□□□ 1.29
SNRPA-207ENST00000599570 EEA1Q15075 1411 aa23.11■■□□□ 1.29
SNRPA-207ENST00000599570 CARMIL1Q5VZK9 1371 aa23.11■■□□□ 1.29
SNRPA-207ENST00000599570 ARHGEF11O15085 1522 aa23.08■■□□□ 1.28
SNRPA-207ENST00000599570 RUSC2Q8N2Y8 1516 aa23.08■■□□□ 1.28
SNRPA-207ENST00000599570 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
SNRPA-207ENST00000599570 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
SNRPA-207ENST00000599570 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
SNRPA-207ENST00000599570 RAPGEF2Q9Y4G8 1499 aa23.04■■□□□ 1.28
SNRPA-207ENST00000599570 SHROOM2Q13796 1616 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms