RNA–Protein interactions for RNA: ENST00000554812.5

PSMA3-207, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 1,279 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-207ENST00000554812 AEBP2Q6ZN18 517 aaPredicted RBP27.63■■■□□ 2.01
PSMA3-207ENST00000554812 CHIC1Q5VXU3 224 aa26.13■■□□□ 1.77
PSMA3-207ENST00000554812 SENP3Q9H4L4 574 aaPredicted RBP23.45■■□□□ 1.34
PSMA3-207ENST00000554812 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
PSMA3-207ENST00000554812 NISCHQ9Y2I1 1504 aa23.13■■□□□ 1.29
PSMA3-207ENST00000554812 FOXD1Q16676 465 aa21.96■■□□□ 1.11
PSMA3-207ENST00000554812 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
PSMA3-207ENST00000554812 PLPPR3Q6T4P5 718 aa20.84■□□□□ 0.93
PSMA3-207ENST00000554812 ABCC9O60706 1549 aa20.83■□□□□ 0.92
PSMA3-207ENST00000554812 PPP6R1Q9UPN7 881 aa20.57■□□□□ 0.88
PSMA3-207ENST00000554812 ADRA2BP18089 450 aa20.51■□□□□ 0.87
PSMA3-207ENST00000554812 PIAS4Q8N2W9 510 aaPredicted RBP20.5■□□□□ 0.87
PSMA3-207ENST00000554812 MSH5O43196 834 aa20.44■□□□□ 0.86
PSMA3-207ENST00000554812 POTEDQ86YR6 584 aa20.44■□□□□ 0.86
PSMA3-207ENST00000554812 RB1CC1Q8TDY2 1594 aa19.82■□□□□ 0.76
PSMA3-207ENST00000554812 NACADO15069 1562 aa19.66■□□□□ 0.74
PSMA3-207ENST00000554812 DNAJC5BQ9UF47 199 aa19.58■□□□□ 0.72
PSMA3-207ENST00000554812 UNC13AQ9UPW8 1703 aa19.48■□□□□ 0.71
PSMA3-207ENST00000554812 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
PSMA3-207ENST00000554812 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
PSMA3-207ENST00000554812 DCAF8L2P0C7V8 631 aa19.3■□□□□ 0.68
PSMA3-207ENST00000554812 PABPN1Q86U42 306 aaKnown RBP eCLIP19.29■□□□□ 0.68
PSMA3-207ENST00000554812 ZCCHC6Q5VYS8 1495 aaKnown RBP19.19■□□□□ 0.66
PSMA3-207ENST00000554812 DCAF1Q9Y4B6 1507 aa19.13■□□□□ 0.65
PSMA3-207ENST00000554812 SHROOM4Q9ULL8 1493 aa19.03■□□□□ 0.64
PSMA3-207ENST00000554812 SCRIBQ14160 1630 aa18.96■□□□□ 0.63
PSMA3-207ENST00000554812 MAPK8IP2Q13387 824 aaPredicted RBP18.89■□□□□ 0.61
PSMA3-207ENST00000554812 CC2D2AQ9P2K1 1620 aa18.86■□□□□ 0.61
PSMA3-207ENST00000554812 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
PSMA3-207ENST00000554812 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.59
PSMA3-207ENST00000554812 DMRT2Q9Y5R5 561 aa18.61■□□□□ 0.57
PSMA3-207ENST00000554812 SCAF1Q9H7N4 1312 aaKnown RBP18.6■□□□□ 0.57
PSMA3-207ENST00000554812 PPP4R3CPQ6ZMV5 832 aa18.34■□□□□ 0.53
PSMA3-207ENST00000554812 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
PSMA3-207ENST00000554812 SMARCA4P51532 1647 aa18.09■□□□□ 0.49
PSMA3-207ENST00000554812 ATAD2BQ9ULI0 1458 aa18.08■□□□□ 0.49
PSMA3-207ENST00000554812 HMGXB3Q12766 1538 aa18.06■□□□□ 0.48
PSMA3-207ENST00000554812 SMARCA2P51531 1590 aa18.03■□□□□ 0.48
PSMA3-207ENST00000554812 CUX2O14529 1486 aa18■□□□□ 0.47
PSMA3-207ENST00000554812 DCAF8L1A6NGE4 600 aa17.98■□□□□ 0.47
PSMA3-207ENST00000554812 DNAJC5Q9H3Z4 198 aa17.98■□□□□ 0.47
PSMA3-207ENST00000554812 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
PSMA3-207ENST00000554812 ERCC6Q03468 1493 aa17.95■□□□□ 0.46
PSMA3-207ENST00000554812 PEG3Q9GZU2 1588 aa17.94■□□□□ 0.46
PSMA3-207ENST00000554812 CNKSR2Q8WXI2 1034 aa17.93■□□□□ 0.46
PSMA3-207ENST00000554812 NESP48681 1621 aa17.9■□□□□ 0.46
PSMA3-207ENST00000554812 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
PSMA3-207ENST00000554812 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
PSMA3-207ENST00000554812 MROH2BQ7Z745 1585 aa17.83■□□□□ 0.44
PSMA3-207ENST00000554812 THOC2Q8NI27 1593 aaKnown RBP17.83■□□□□ 0.44
PSMA3-207ENST00000554812 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.44
PSMA3-207ENST00000554812 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
PSMA3-207ENST00000554812 KIF21AQ7Z4S6 1674 aa17.74■□□□□ 0.43
PSMA3-207ENST00000554812 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
PSMA3-207ENST00000554812 WIZO95785 1651 aa17.62■□□□□ 0.41
PSMA3-207ENST00000554812 PDS5BQ9NTI5 1447 aa17.58■□□□□ 0.41
PSMA3-207ENST00000554812 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
PSMA3-207ENST00000554812 CADPSQ9ULU8 1353 aa17.53■□□□□ 0.4
PSMA3-207ENST00000554812 WDR62O43379 1518 aa17.52■□□□□ 0.4
PSMA3-207ENST00000554812 MRC2Q9UBG0 1479 aa17.5■□□□□ 0.39
PSMA3-207ENST00000554812 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
PSMA3-207ENST00000554812 CEP164Q9UPV0 1460 aa17.4■□□□□ 0.38
PSMA3-207ENST00000554812 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
PSMA3-207ENST00000554812 RSF1Q96T23 1441 aaPredicted RBP17.39■□□□□ 0.38
PSMA3-207ENST00000554812 CFTRP13569 1480 aa17.37■□□□□ 0.37
PSMA3-207ENST00000554812 FANCD2Q9BXW9 1451 aa17.37■□□□□ 0.37
PSMA3-207ENST00000554812 NPM3O75607 178 aaKnown RBP17.37■□□□□ 0.37
PSMA3-207ENST00000554812 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
PSMA3-207ENST00000554812 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
PSMA3-207ENST00000554812 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
PSMA3-207ENST00000554812 CCDC88BA6NC98 1476 aa17.15■□□□□ 0.34
PSMA3-207ENST00000554812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.13■□□□□ 0.33
PSMA3-207ENST00000554812 TRIM41Q8WV44 630 aa17.12■□□□□ 0.33
PSMA3-207ENST00000554812 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
PSMA3-207ENST00000554812 TOPBP1Q92547 1522 aa17.06■□□□□ 0.32
PSMA3-207ENST00000554812 KCNA4P22459 653 aa17.06■□□□□ 0.32
PSMA3-207ENST00000554812 IFT140Q96RY7 1462 aa17.05■□□□□ 0.32
PSMA3-207ENST00000554812 EIF4G3O43432 1585 aaKnown RBP17.03■□□□□ 0.32
PSMA3-207ENST00000554812 DNMBPQ6XZF7 1577 aa17.02■□□□□ 0.31
PSMA3-207ENST00000554812 OSCARQ8IYS5 282 aa17.01■□□□□ 0.31
PSMA3-207ENST00000554812 RIMBP3CA6NJZ7 1639 aa16.99■□□□□ 0.31
PSMA3-207ENST00000554812 RIMBP3BA6NNM3 1639 aa16.99■□□□□ 0.31
PSMA3-207ENST00000554812 RIMBP3Q9UFD9 1639 aa16.99■□□□□ 0.31
PSMA3-207ENST00000554812 TARBP1Q13395 1621 aaKnown RBP16.97■□□□□ 0.31
PSMA3-207ENST00000554812 ABCC8Q09428 1581 aa16.95■□□□□ 0.3
PSMA3-207ENST00000554812 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
PSMA3-207ENST00000554812 CHD1O14646 1710 aa16.91■□□□□ 0.3
PSMA3-207ENST00000554812 POLA1P09884 1462 aaPredicted RBP16.89■□□□□ 0.29
PSMA3-207ENST00000554812 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.291e-10■■■■■ 54.7
PSMA3-207ENST00000554812 RAD54L2Q9Y4B4 1467 aa16.8■□□□□ 0.28
PSMA3-207ENST00000554812 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
PSMA3-207ENST00000554812 CUX1P39880 1505 aa16.77■□□□□ 0.28
PSMA3-207ENST00000554812 FGD5Q6ZNL6 1462 aa16.76■□□□□ 0.27
PSMA3-207ENST00000554812 U3KPZ7 1027 aaPredicted RBP16.76■□□□□ 0.27
PSMA3-207ENST00000554812 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
PSMA3-207ENST00000554812 SOGA1O94964 1423 aa16.72■□□□□ 0.27
PSMA3-207ENST00000554812 CLASP1Q7Z460 1538 aa16.72■□□□□ 0.27
PSMA3-207ENST00000554812 SNAPC4Q5SXM2 1469 aa16.72■□□□□ 0.27
PSMA3-207ENST00000554812 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
PSMA3-207ENST00000554812 MAGI1Q96QZ7 1491 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms