RNA–Protein interactions for RNA: ENST00000396384.1

TUBB-207, Transcript of tubulin beta class I, humanhuman

TSL 3 BASIC

Gene TUBB, Length 2,823 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-207ENST00000396384 NISCHQ9Y2I1 1504 aa22.26■■□□□ 1.15
TUBB-207ENST00000396384 CCDC180Q9P1Z9 1646 aa19.37■□□□□ 0.69
TUBB-207ENST00000396384 ZCCHC6Q5VYS8 1495 aaKnown RBP18.67■□□□□ 0.58
TUBB-207ENST00000396384 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
TUBB-207ENST00000396384 ABCC9O60706 1549 aa18.55■□□□□ 0.56
TUBB-207ENST00000396384 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
TUBB-207ENST00000396384 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
TUBB-207ENST00000396384 MYO15BQ96JP2 1530 aa18.11■□□□□ 0.49
TUBB-207ENST00000396384 NACADO15069 1562 aa18.08■□□□□ 0.48
TUBB-207ENST00000396384 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.47
TUBB-207ENST00000396384 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
TUBB-207ENST00000396384 SUPT5HO00267 1087 aaKnown RBP17.89■□□□□ 0.45
TUBB-207ENST00000396384 UNC13AQ9UPW8 1703 aa17.65■□□□□ 0.42
TUBB-207ENST00000396384 PABPN1Q86U42 306 aaKnown RBP eCLIP17.52■□□□□ 0.4
TUBB-207ENST00000396384 BICRAQ9NZM4 1560 aa17.47■□□□□ 0.39
TUBB-207ENST00000396384 CHIC1Q5VXU3 224 aa17.43■□□□□ 0.38
TUBB-207ENST00000396384 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
TUBB-207ENST00000396384 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
TUBB-207ENST00000396384 MROH2BQ7Z745 1585 aa17.24■□□□□ 0.35
TUBB-207ENST00000396384 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
TUBB-207ENST00000396384 HRCP23327 699 aa17.16■□□□□ 0.34
TUBB-207ENST00000396384 SMARCA4P51532 1647 aa17.13■□□□□ 0.33
TUBB-207ENST00000396384 WIZO95785 1651 aa17.1■□□□□ 0.33
TUBB-207ENST00000396384 PCGF6Q9BYE7 350 aa17.08■□□□□ 0.32
TUBB-207ENST00000396384 LOC105371045A0A1W2PR82 267 aa16.95■□□□□ 0.3
TUBB-207ENST00000396384 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
TUBB-207ENST00000396384 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
TUBB-207ENST00000396384 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
TUBB-207ENST00000396384 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
TUBB-207ENST00000396384 SMARCA2P51531 1590 aa16.82■□□□□ 0.28
TUBB-207ENST00000396384 PPARGC1BQ86YN6 1023 aaKnown RBP16.78■□□□□ 0.28
TUBB-207ENST00000396384 BAZ1BQ9UIG0 1483 aaKnown RBP16.78■□□□□ 0.28
TUBB-207ENST00000396384 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
TUBB-207ENST00000396384 CC2D2AQ9P2K1 1620 aa16.73■□□□□ 0.27
TUBB-207ENST00000396384 NCAPD3P42695 1498 aa16.71■□□□□ 0.27
TUBB-207ENST00000396384 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
TUBB-207ENST00000396384 HMGXB3Q12766 1538 aa16.66■□□□□ 0.26
TUBB-207ENST00000396384 TRIM41Q8WV44 630 aa16.65■□□□□ 0.26
TUBB-207ENST00000396384 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.24
TUBB-207ENST00000396384 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
TUBB-207ENST00000396384 ZEB1P37275 1124 aaPredicted RBP16.41■□□□□ 0.22
TUBB-207ENST00000396384 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
TUBB-207ENST00000396384 EHMT2Q96KQ7 1210 aa16.39■□□□□ 0.21
TUBB-207ENST00000396384 CFTRP13569 1480 aa16.33■□□□□ 0.21
TUBB-207ENST00000396384 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
TUBB-207ENST00000396384 NESP48681 1621 aa16.26■□□□□ 0.19
TUBB-207ENST00000396384 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
TUBB-207ENST00000396384 SYNJ1O43426 1573 aa16.2■□□□□ 0.18
TUBB-207ENST00000396384 PRDM2Q13029 1718 aa16.2■□□□□ 0.18
TUBB-207ENST00000396384 LAMC3Q9Y6N6 1575 aa16.15■□□□□ 0.18
TUBB-207ENST00000396384 FANCD2Q9BXW9 1451 aa16.14■□□□□ 0.17
TUBB-207ENST00000396384 CUX1P39880 1505 aa16.11■□□□□ 0.17
TUBB-207ENST00000396384 TOP2BQ02880 1626 aa16.09■□□□□ 0.17
TUBB-207ENST00000396384 SOGA1O94964 1423 aa16.08■□□□□ 0.16
TUBB-207ENST00000396384 BIVM-ERCC5R4GMW8 1640 aa16.06■□□□□ 0.16
TUBB-207ENST00000396384 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
TUBB-207ENST00000396384 PDS5BQ9NTI5 1447 aa16.04■□□□□ 0.16
TUBB-207ENST00000396384 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
TUBB-207ENST00000396384 KIF21AQ7Z4S6 1674 aa16.02■□□□□ 0.16
TUBB-207ENST00000396384 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.02■□□□□ 0.15
TUBB-207ENST00000396384 PELP1Q8IZL8 1130 aaKnown RBP16■□□□□ 0.15
TUBB-207ENST00000396384 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
TUBB-207ENST00000396384 URB2Q14146 1524 aaKnown RBP15.95■□□□□ 0.14
TUBB-207ENST00000396384 TOPBP1Q92547 1522 aa15.95■□□□□ 0.14
TUBB-207ENST00000396384 FGD5Q6ZNL6 1462 aa15.95■□□□□ 0.14
TUBB-207ENST00000396384 DNMBPQ6XZF7 1577 aa15.94■□□□□ 0.14
TUBB-207ENST00000396384 EEA1Q15075 1411 aa15.93■□□□□ 0.14
TUBB-207ENST00000396384 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
TUBB-207ENST00000396384 CSRNP3Q8WYN3 585 aa15.91■□□□□ 0.14
TUBB-207ENST00000396384 TTBK1Q5TCY1 1321 aaPredicted RBP15.9■□□□□ 0.14
TUBB-207ENST00000396384 SCAF1Q9H7N4 1312 aaKnown RBP15.9■□□□□ 0.14
TUBB-207ENST00000396384 TNIKQ9UKE5 1360 aa15.89■□□□□ 0.13
TUBB-207ENST00000396384 POLA1P09884 1462 aaPredicted RBP15.88■□□□□ 0.13
TUBB-207ENST00000396384 ERCC6Q03468 1493 aa15.87■□□□□ 0.13
TUBB-207ENST00000396384 RAD54L2Q9Y4B4 1467 aa15.87■□□□□ 0.13
TUBB-207ENST00000396384 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
TUBB-207ENST00000396384 UBTFP17480 764 aaKnown RBP15.85■□□□□ 0.13
TUBB-207ENST00000396384 CUX2O14529 1486 aa15.84■□□□□ 0.13
TUBB-207ENST00000396384 KIF27Q86VH2 1401 aa15.83■□□□□ 0.12
TUBB-207ENST00000396384 GOLGA3Q08378 1498 aa15.79■□□□□ 0.12
TUBB-207ENST00000396384 KIF21BO75037 1637 aa15.79■□□□□ 0.12
TUBB-207ENST00000396384 ABCA10Q8WWZ4 1543 aa15.76■□□□□ 0.11
TUBB-207ENST00000396384 WDR62O43379 1518 aa15.76■□□□□ 0.11
TUBB-207ENST00000396384 DIEXFQ68CQ4 756 aaKnown RBP15.76■□□□□ 0.11
TUBB-207ENST00000396384 THOC2Q8NI27 1593 aaKnown RBP15.74■□□□□ 0.11
TUBB-207ENST00000396384 RAPGEF2Q9Y4G8 1499 aa15.73■□□□□ 0.11
TUBB-207ENST00000396384 TDRD9Q8NDG6 1382 aaKnown RBP15.73■□□□□ 0.11
TUBB-207ENST00000396384 IGF1RP08069 1367 aa15.72■□□□□ 0.11
TUBB-207ENST00000396384 WDR97A6NE52 1622 aa15.71■□□□□ 0.11
TUBB-207ENST00000396384 TARBP1Q13395 1621 aaKnown RBP15.71■□□□□ 0.11
TUBB-207ENST00000396384 ACIN1Q9UKV3 1341 aaKnown RBP15.71■□□□□ 0.11
TUBB-207ENST00000396384 PRXQ9BXM0 1461 aa15.7■□□□□ 0.1
TUBB-207ENST00000396384 NEUROD1Q13562 356 aa15.67■□□□□ 0.1
TUBB-207ENST00000396384 ABCA5Q8WWZ7 1642 aa15.64■□□□□ 0.09
TUBB-207ENST00000396384 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.092e-10■■■■■ 54
TUBB-207ENST00000396384 GAPVD1Q14C86 1478 aa15.64■□□□□ 0.09
TUBB-207ENST00000396384 CARMIL1Q5VZK9 1371 aa15.64■□□□□ 0.09
TUBB-207ENST00000396384 ZNF608Q9ULD9 1512 aaPredicted RBP15.63■□□□□ 0.09
TUBB-207ENST00000396384 IFT140Q96RY7 1462 aa15.63■□□□□ 0.09
TUBB-207ENST00000396384 ERICH3Q5RHP9 1530 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms