RNA–Protein interactions for RNA: ENST00000412908.6

PSMA3-202, Transcript of proteasome subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene PSMA3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-202ENST00000412908 AEBP2Q6ZN18 517 aaPredicted RBP29.34■■■□□ 2.29
PSMA3-202ENST00000412908 CHIC1Q5VXU3 224 aa28.58■■■□□ 2.17
PSMA3-202ENST00000412908 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
PSMA3-202ENST00000412908 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
PSMA3-202ENST00000412908 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
PSMA3-202ENST00000412908 FOXD1Q16676 465 aa23.13■■□□□ 1.29
PSMA3-202ENST00000412908 ADRA2BP18089 450 aa22.24■■□□□ 1.15
PSMA3-202ENST00000412908 PPP6R1Q9UPN7 881 aa22.24■■□□□ 1.15
PSMA3-202ENST00000412908 PIAS4Q8N2W9 510 aaPredicted RBP21.82■■□□□ 1.08
PSMA3-202ENST00000412908 MSH5O43196 834 aa21.32■■□□□ 1
PSMA3-202ENST00000412908 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
PSMA3-202ENST00000412908 SCAF1Q9H7N4 1312 aaKnown RBP20.3■□□□□ 0.84
PSMA3-202ENST00000412908 MAPK8IP2Q13387 824 aaPredicted RBP20.22■□□□□ 0.83
PSMA3-202ENST00000412908 KCNA4P22459 653 aa19.93■□□□□ 0.78
PSMA3-202ENST00000412908 POTEDQ86YR6 584 aa19.92■□□□□ 0.78
PSMA3-202ENST00000412908 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
PSMA3-202ENST00000412908 CNKSR2Q8WXI2 1034 aa19.87■□□□□ 0.77
PSMA3-202ENST00000412908 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
PSMA3-202ENST00000412908 NPM3O75607 178 aaKnown RBP19.6■□□□□ 0.73
PSMA3-202ENST00000412908 RNF216Q9NWF9 866 aaPredicted RBP19.48■□□□□ 0.71
PSMA3-202ENST00000412908 HOXD11P31277 338 aaPredicted RBP19.4■□□□□ 0.7
PSMA3-202ENST00000412908 DCAF8L1A6NGE4 600 aa19.13■□□□□ 0.65
PSMA3-202ENST00000412908 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
PSMA3-202ENST00000412908 DNAJC5BQ9UF47 199 aa18.89■□□□□ 0.61
PSMA3-202ENST00000412908 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.56
PSMA3-202ENST00000412908 SLC4A2P04920 1241 aa18.52■□□□□ 0.56
PSMA3-202ENST00000412908 EHMT2Q96KQ7 1210 aa18.44■□□□□ 0.54
PSMA3-202ENST00000412908 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.52
PSMA3-202ENST00000412908 ZBTB22O15209 634 aa18.32■□□□□ 0.52
PSMA3-202ENST00000412908 RNF39Q9H2S5 420 aa18.26■□□□□ 0.51
PSMA3-202ENST00000412908 U3KPZ7 1027 aaPredicted RBP18.23■□□□□ 0.51
PSMA3-202ENST00000412908 CSRNP3Q8WYN3 585 aa18.18■□□□□ 0.5
PSMA3-202ENST00000412908 MYCNP04198 464 aaPredicted RBP18.09■□□□□ 0.49
PSMA3-202ENST00000412908 C1QBPQ07021 282 aaKnown RBP18.04■□□□□ 0.48
PSMA3-202ENST00000412908 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.95■□□□□ 0.46
PSMA3-202ENST00000412908 HNRNPUL2Q1KMD3 747 aaKnown RBP17.95■□□□□ 0.46
PSMA3-202ENST00000412908 CACNB1Q02641 598 aaPredicted RBP17.91■□□□□ 0.46
PSMA3-202ENST00000412908 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
PSMA3-202ENST00000412908 APLP2Q06481 763 aa17.77■□□□□ 0.44
PSMA3-202ENST00000412908 SPINK5Q9NQ38 1064 aaPredicted RBP17.77■□□□□ 0.44
PSMA3-202ENST00000412908 CAPN15O75808 1086 aa17.73■□□□□ 0.43
PSMA3-202ENST00000412908 ATF5Q9Y2D1 282 aaPredicted RBP17.66■□□□□ 0.42
PSMA3-202ENST00000412908 ATXN8OSP0DMR3 200 aa17.65■□□□□ 0.42
PSMA3-202ENST00000412908 TRHP20396 242 aaPredicted RBP17.65■□□□□ 0.42
PSMA3-202ENST00000412908 ZNF219Q9P2Y4 722 aaPredicted RBP17.55■□□□□ 0.4
PSMA3-202ENST00000412908 ABCB7O75027 752 aa17.4■□□□□ 0.38
PSMA3-202ENST00000412908 DSG3P32926 999 aa17.38■□□□□ 0.37
PSMA3-202ENST00000412908 POLA2Q14181 598 aa17.32■□□□□ 0.36
PSMA3-202ENST00000412908 ZBTB12Q9Y330 459 aaPredicted RBP16.95■□□□□ 0.3
PSMA3-202ENST00000412908 FBLN2P98095 1184 aa16.91■□□□□ 0.3
PSMA3-202ENST00000412908 MKRN4PQ13434 485 aaPredicted RBP16.87■□□□□ 0.29
PSMA3-202ENST00000412908 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
PSMA3-202ENST00000412908 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
PSMA3-202ENST00000412908 SPDYE2BA6NHP3 402 aa16.5■□□□□ 0.23
PSMA3-202ENST00000412908 SPDYE6P0CI01 402 aa16.5■□□□□ 0.23
PSMA3-202ENST00000412908 SPDYE2Q495Y8 402 aa16.5■□□□□ 0.23
PSMA3-202ENST00000412908 SPDYE4A6NLX3 237 aa16.49■□□□□ 0.23
PSMA3-202ENST00000412908 ZNF692Q9BU19 519 aaPredicted RBP16.49■□□□□ 0.23
PSMA3-202ENST00000412908 FKBP8Q14318 412 aa16.48■□□□□ 0.23
PSMA3-202ENST00000412908 SSUH2Q9Y2M2 353 aa16.35■□□□□ 0.21
PSMA3-202ENST00000412908 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
PSMA3-202ENST00000412908 PABPN1Q86U42 306 aaKnown RBP eCLIP16.27■□□□□ 0.2
PSMA3-202ENST00000412908 REM2Q8IYK8 340 aaPredicted RBP16.21■□□□□ 0.19
PSMA3-202ENST00000412908 PROM2Q8N271 834 aa16.1■□□□□ 0.17
PSMA3-202ENST00000412908 CLEC11AQ9Y240 323 aa16.07■□□□□ 0.16
PSMA3-202ENST00000412908 SPDYE1Q8NFV5 336 aaPredicted RBP16.05■□□□□ 0.16
PSMA3-202ENST00000412908 PITPNM1O00562 1244 aa16.02■□□□□ 0.16
PSMA3-202ENST00000412908 STAG3Q9UJ98 1225 aa15.94■□□□□ 0.14
PSMA3-202ENST00000412908 CHRDL2Q6WN34 429 aa15.91■□□□□ 0.14
PSMA3-202ENST00000412908 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
PSMA3-202ENST00000412908 FBXO3Q9UK99 471 aa15.85■□□□□ 0.13
PSMA3-202ENST00000412908 FXR2P51116 673 aaKnown RBP eCLIP15.7■□□□□ 0.1
PSMA3-202ENST00000412908 PIP4P2Q8N4L2 257 aa15.7■□□□□ 0.1
PSMA3-202ENST00000412908 MIER1Q8N108 512 aa15.68■□□□□ 0.1
PSMA3-202ENST00000412908 CHADLQ6NUI6 762 aa15.67■□□□□ 0.1
PSMA3-202ENST00000412908 PRKAR2AP13861 404 aaKnown RBP15.65■□□□□ 0.1
PSMA3-202ENST00000412908 VASPP50552 380 aaPredicted RBP15.65■□□□□ 0.1
PSMA3-202ENST00000412908 PLCD3Q8N3E9 789 aa15.65■□□□□ 0.1
PSMA3-202ENST00000412908 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
PSMA3-202ENST00000412908 PLEKHG5O94827 1062 aa15.57■□□□□ 0.08
PSMA3-202ENST00000412908 POTEHQ6S545 545 aa15.56■□□□□ 0.08
PSMA3-202ENST00000412908 KLHL34Q8N239 644 aa15.48■□□□□ 0.07
PSMA3-202ENST00000412908 FARP1Q9Y4F1 1045 aaPredicted RBP15.46■□□□□ 0.07
PSMA3-202ENST00000412908 IFNLR1Q8IU57 520 aaPredicted RBP15.45■□□□□ 0.06
PSMA3-202ENST00000412908 MNX1P50219 401 aaPredicted RBP15.42■□□□□ 0.06
PSMA3-202ENST00000412908 ZBTB47Q9UFB7 747 aaPredicted RBP15.4■□□□□ 0.06
PSMA3-202ENST00000412908 NPM1P06748 294 aaKnown RBP eCLIP15.37■□□□□ 0.05
PSMA3-202ENST00000412908 HAX1O00165 279 aa15.27■□□□□ 0.04
PSMA3-202ENST00000412908 SPOCK2Q92563 424 aa15.27■□□□□ 0.04
PSMA3-202ENST00000412908 NUBP1P53384 320 aa15.22■□□□□ 0.03
PSMA3-202ENST00000412908 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
PSMA3-202ENST00000412908 CD44P16070 742 aaKnown RBP15.19■□□□□ 0.02
PSMA3-202ENST00000412908 TSPYL2Q9H2G4 693 aaPredicted RBP15.18■□□□□ 0.02
PSMA3-202ENST00000412908 C19orf67A6NJJ6 358 aa15.17■□□□□ 0.02
PSMA3-202ENST00000412908 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
PSMA3-202ENST00000412908 DCAF8Q5TAQ9 597 aa15.14■□□□□ 0.01
PSMA3-202ENST00000412908 EVX2Q03828 476 aa15.11■□□□□ 0.01
PSMA3-202ENST00000412908 FAM212AQ96EL1 285 aa15.11■□□□□ 0.01
PSMA3-202ENST00000412908 ZRANB1Q9UGI0 708 aa15.11■□□□□ 0.01
PSMA3-202ENST00000412908 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms