RNA–Protein interactions for RNA: ENST00000555931.5

PSMA3-209, Transcript of proteasome subunit alpha 3, humanhuman

TSL 4

Gene PSMA3, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-209ENST00000555931 AEBP2Q6ZN18 517 aaPredicted RBP19.6■□□□□ 0.73
PSMA3-209ENST00000555931 CHIC1Q5VXU3 224 aa18.38■□□□□ 0.53
PSMA3-209ENST00000555931 POTEDQ86YR6 584 aa17.03■□□□□ 0.32
PSMA3-209ENST00000555931 SENP3Q9H4L4 574 aaPredicted RBP16.98■□□□□ 0.31
PSMA3-209ENST00000555931 PHF23Q9BUL5 403 aaPredicted RBP16.55■□□□□ 0.24
PSMA3-209ENST00000555931 FOXD1Q16676 465 aa15.93■□□□□ 0.14
PSMA3-209ENST00000555931 NISCHQ9Y2I1 1504 aa15.91■□□□□ 0.14
PSMA3-209ENST00000555931 MSH5O43196 834 aa15.42■□□□□ 0.06
PSMA3-209ENST00000555931 PIAS4Q8N2W9 510 aaPredicted RBP14.63□□□□□ -0.07
PSMA3-209ENST00000555931 CCDC180Q9P1Z9 1646 aa14.08□□□□□ -0.16
PSMA3-209ENST00000555931 CACNB1Q02641 598 aaPredicted RBP13.95□□□□□ -0.18
PSMA3-209ENST00000555931 PPP6R1Q9UPN7 881 aa13.94□□□□□ -0.18
PSMA3-209ENST00000555931 ADRA2BP18089 450 aa13.85□□□□□ -0.19
PSMA3-209ENST00000555931 ABCC9O60706 1549 aa13.76□□□□□ -0.21
PSMA3-209ENST00000555931 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
PSMA3-209ENST00000555931 ZCCHC6Q5VYS8 1495 aaKnown RBP13.26□□□□□ -0.29
PSMA3-209ENST00000555931 DMRT2Q9Y5R5 561 aa13.25□□□□□ -0.29
PSMA3-209ENST00000555931 NACADO15069 1562 aa13.23□□□□□ -0.29
PSMA3-209ENST00000555931 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
PSMA3-209ENST00000555931 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
PSMA3-209ENST00000555931 MYO15BQ96JP2 1530 aa13.18□□□□□ -0.3
PSMA3-209ENST00000555931 DCAF1Q9Y4B6 1507 aa13.15□□□□□ -0.3
PSMA3-209ENST00000555931 POTEHQ6S545 545 aa13.12□□□□□ -0.31
PSMA3-209ENST00000555931 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
PSMA3-209ENST00000555931 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
PSMA3-209ENST00000555931 RNF39Q9H2S5 420 aa13□□□□□ -0.33
PSMA3-209ENST00000555931 BICRAQ9NZM4 1560 aa12.93□□□□□ -0.34
PSMA3-209ENST00000555931 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.34
PSMA3-209ENST00000555931 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
PSMA3-209ENST00000555931 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
PSMA3-209ENST00000555931 C1QBPQ07021 282 aaKnown RBP12.77□□□□□ -0.37
PSMA3-209ENST00000555931 SCAF1Q9H7N4 1312 aaKnown RBP12.75□□□□□ -0.37
PSMA3-209ENST00000555931 DNAJC5BQ9UF47 199 aa12.72□□□□□ -0.37
PSMA3-209ENST00000555931 SHROOM4Q9ULL8 1493 aa12.67□□□□□ -0.38
PSMA3-209ENST00000555931 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.41
PSMA3-209ENST00000555931 CC2D2AQ9P2K1 1620 aa12.46□□□□□ -0.41
PSMA3-209ENST00000555931 CECR2Q9BXF3 1484 aa12.44□□□□□ -0.42
PSMA3-209ENST00000555931 SMARCA4P51532 1647 aa12.32□□□□□ -0.44
PSMA3-209ENST00000555931 HOXD11P31277 338 aaPredicted RBP12.3□□□□□ -0.44
PSMA3-209ENST00000555931 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
PSMA3-209ENST00000555931 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
PSMA3-209ENST00000555931 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.45
PSMA3-209ENST00000555931 NCAPD3P42695 1498 aa12.25□□□□□ -0.45
PSMA3-209ENST00000555931 PEG3Q9GZU2 1588 aa12.22□□□□□ -0.45
PSMA3-209ENST00000555931 SMARCA2P51531 1590 aa12.19□□□□□ -0.46
PSMA3-209ENST00000555931 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
PSMA3-209ENST00000555931 RSF1Q96T23 1441 aaPredicted RBP12.16□□□□□ -0.46
PSMA3-209ENST00000555931 HMGXB3Q12766 1538 aa12.15□□□□□ -0.46
PSMA3-209ENST00000555931 WIZO95785 1651 aa12.14□□□□□ -0.47
PSMA3-209ENST00000555931 BAZ1BQ9UIG0 1483 aaKnown RBP12.1□□□□□ -0.47
PSMA3-209ENST00000555931 KCNA4P22459 653 aa12.01□□□□□ -0.49
PSMA3-209ENST00000555931 TOP2AP11388 1531 aaKnown RBP11.98□□□□□ -0.49
PSMA3-209ENST00000555931 NESP48681 1621 aa11.97□□□□□ -0.49
PSMA3-209ENST00000555931 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
PSMA3-209ENST00000555931 CCDC88BA6NC98 1476 aa11.88□□□□□ -0.51
PSMA3-209ENST00000555931 CADPSQ9ULU8 1353 aa11.87□□□□□ -0.51
PSMA3-209ENST00000555931 LAMC3Q9Y6N6 1575 aa11.87□□□□□ -0.51
PSMA3-209ENST00000555931 CFTRP13569 1480 aa11.83□□□□□ -0.52
PSMA3-209ENST00000555931 SUPT5HO00267 1087 aaKnown RBP11.81□□□□□ -0.52
PSMA3-209ENST00000555931 KIF21AQ7Z4S6 1674 aa11.79□□□□□ -0.52
PSMA3-209ENST00000555931 ERCC6Q03468 1493 aa11.78□□□□□ -0.52
PSMA3-209ENST00000555931 DSG3P32926 999 aa11.77□□□□□ -0.53
PSMA3-209ENST00000555931 PDS5BQ9NTI5 1447 aa11.77□□□□□ -0.53
PSMA3-209ENST00000555931 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
PSMA3-209ENST00000555931 SP7Q8TDD2 431 aaPredicted RBP11.75□□□□□ -0.53
PSMA3-209ENST00000555931 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.53
PSMA3-209ENST00000555931 FANCD2Q9BXW9 1451 aa11.72□□□□□ -0.53
PSMA3-209ENST00000555931 PPP4R3CPQ6ZMV5 832 aa11.71□□□□□ -0.53
PSMA3-209ENST00000555931 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
PSMA3-209ENST00000555931 CUX2O14529 1486 aa11.69□□□□□ -0.54
PSMA3-209ENST00000555931 PRDM2Q13029 1718 aa11.69□□□□□ -0.54
PSMA3-209ENST00000555931 CEP164Q9UPV0 1460 aa11.68□□□□□ -0.54
PSMA3-209ENST00000555931 MRC2Q9UBG0 1479 aa11.67□□□□□ -0.54
PSMA3-209ENST00000555931 WDR62O43379 1518 aa11.65□□□□□ -0.54
PSMA3-209ENST00000555931 URB2Q14146 1524 aaKnown RBP11.65□□□□□ -0.54
PSMA3-209ENST00000555931 CSRNP3Q8WYN3 585 aa11.64□□□□□ -0.55
PSMA3-209ENST00000555931 CAPN15O75808 1086 aa11.6□□□□□ -0.55
PSMA3-209ENST00000555931 TOPBP1Q92547 1522 aa11.56□□□□□ -0.56
PSMA3-209ENST00000555931 SLC4A1APQ9BWU0 796 aaKnown RBP11.56□□□□□ -0.56
PSMA3-209ENST00000555931 CHRDL2Q6WN34 429 aa11.52□□□□□ -0.57
PSMA3-209ENST00000555931 SPINK5Q9NQ38 1064 aaPredicted RBP11.52□□□□□ -0.57
PSMA3-209ENST00000555931 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
PSMA3-209ENST00000555931 CUX1P39880 1505 aa11.51□□□□□ -0.57
PSMA3-209ENST00000555931 ABCC8Q09428 1581 aa11.5□□□□□ -0.57
PSMA3-209ENST00000555931 POLA1P09884 1462 aaPredicted RBP11.47□□□□□ -0.57
PSMA3-209ENST00000555931 TARBP1Q13395 1621 aaKnown RBP11.46□□□□□ -0.58
PSMA3-209ENST00000555931 ZNF608Q9ULD9 1512 aaPredicted RBP11.45□□□□□ -0.58
PSMA3-209ENST00000555931 IFT140Q96RY7 1462 aa11.44□□□□□ -0.58
PSMA3-209ENST00000555931 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
PSMA3-209ENST00000555931 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
PSMA3-209ENST00000555931 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
PSMA3-209ENST00000555931 SOGA1O94964 1423 aa11.41□□□□□ -0.58
PSMA3-209ENST00000555931 WRNQ14191 1432 aaPredicted RBP eCLIP11.4□□□□□ -0.58
PSMA3-209ENST00000555931 TOP2BQ02880 1626 aa11.39□□□□□ -0.59
PSMA3-209ENST00000555931 BIVM-ERCC5R4GMW8 1640 aa11.39□□□□□ -0.59
PSMA3-209ENST00000555931 AQRO60306 1485 aaKnown RBP eCLIP11.38□□□□□ -0.591e-10■■■■■ 54.7
PSMA3-209ENST00000555931 WDR97A6NE52 1622 aa11.36□□□□□ -0.59
PSMA3-209ENST00000555931 TDRD9Q8NDG6 1382 aaKnown RBP11.36□□□□□ -0.59
PSMA3-209ENST00000555931 EIF4G3O43432 1585 aaKnown RBP11.36□□□□□ -0.59
PSMA3-209ENST00000555931 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms